BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021288
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827...   259   5e-69
dbj|BAD23759.1| ribosomal protein-like [Oryza sativa Japonica Gr...   252   8e-67
ref|XP_003559567.1| PREDICTED: uncharacterized protein LOC100824...   247   1e-66
gb|ABA95927.1| transposon protein, putative, Pong sub-class [Ory...   248   7e-65
gb|ABA96831.1| transposon protein, putative, Pong sub-class [Ory...   246   3e-64

>ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827873 [Brachypodium
           distachyon]
          Length = 423

 Score =  259 bits (661), Expect(2) = 5e-69
 Identities = 133/279 (47%), Positives = 170/279 (60%), Gaps = 2/279 (0%)
 Frame = -2

Query: 905 RPHGGSKKGRKCKNRQYEATLARVNANYFGANPIFREHDFRRRFSMGQPLFTRIFNHLNH 726
           R  GGS  GR+  NR   A   R+  +YF  +P++    FRRRF M +PLF RI   +  
Sbjct: 37  RRRGGSVLGRQVINRDRVAGHGRLFEDYFTQHPVYGPSYFRRRFRMARPLFFRIVKAMRE 96

Query: 725 NVPYFQQKVNCAGKFGN*PKNESNCCYTNVYLWDCN*SSR*YVHVAEPTVYECMRYFCDG 546
           +  YF QK N A K G     ++   +  +       ++  YV + + T  + M+ F   
Sbjct: 97  HDSYFVQKRNAARKLGLSSLQKATAVFRMLTYGVAADATDEYVRIGKSTALDSMKAFVRA 156

Query: 545 IIRIFGGEYLCKPNAVYIHRLLKEFEERGWPGMLGSIDCMHWQWKNCPSAWQGSHTGHKH 366
           +I +FG EYL  PN     RLL   E RG+PGMLGSIDCMHW WKNCPS+WQG +TGH  
Sbjct: 157 VIEVFGDEYLRSPNDADTARLLAIGENRGFPGMLGSIDCMHWGWKNCPSSWQGMYTGHVR 216

Query: 365 KPTMILEAVADRDAWIWHVFFGMTGSHNDLNVLDRSPIFDDIVNDEAISCNYTVNGHHYD 186
           +PT++LEAV   D WIWHVFFG  GS ND+NVL RSPIF  +   +A   NYTVNG++Y 
Sbjct: 217 EPTIVLEAVVSLDLWIWHVFFGSPGSLNDINVLHRSPIFTRLAEGQAPQVNYTVNGNNYT 276

Query: 185 MGYYLADGIYPNYATLIQTIAKPTIA*NKHF--CKEARR 75
           MGYYLAD IYP +ATL++TI  P    NK+F  C+EA R
Sbjct: 277 MGYYLADSIYPQWATLVKTIPSPLGQKNKYFAKCQEAHR 315



 Score = 29.6 bits (65), Expect(2) = 5e-69
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -1

Query: 60  ERAFGILQSRWTILANPCRL 1
           ERAFG+LQ+R+ I+  P RL
Sbjct: 319 ERAFGVLQARFAIVRGPARL 338


>dbj|BAD23759.1| ribosomal protein-like [Oryza sativa Japonica Group]
          Length = 916

 Score =  252 bits (644), Expect(2) = 8e-67
 Identities = 127/271 (46%), Positives = 166/271 (61%)
 Frame = -2

Query: 899  HGGSKKGRKCKNRQYEATLARVNANYFGANPIFREHDFRRRFSMGQPLFTRIFNHLNHNV 720
            HGGS  G +  +R  EA   R+  +YF  NP +    FRRR  M +PLF RI N +  + 
Sbjct: 532  HGGSVMGHEVIDRNREARHLRLYQDYFSNNPTYGPVLFRRRNRMSRPLFLRIMNAIEDHD 591

Query: 719  PYFQQKVNCAGKFGN*PKNESNCCYTNVYLWDCN*SSR*YVHVAEPTVYECMRYFCDGII 540
             YF QK N AG  G     +       +       +   Y+ +AE T  E +R F   ++
Sbjct: 592  DYFVQKRNAAGLIGFSCHQKVTAAMRQLAYGIAADALDEYLGIAESTAIESLRRFVKAVV 651

Query: 539  RIFGGEYLCKPNAVYIHRLLKEFEERGWPGMLGSIDCMHWQWKNCPSAWQGSHTGHKHKP 360
            ++F  EYL  PN     RLL+  E+RG+PGMLGSIDCMHW+WKNCP+   G + GH H+P
Sbjct: 652  QVFEHEYLRSPNENDTTRLLELGEDRGFPGMLGSIDCMHWKWKNCPTELHGMYQGHVHEP 711

Query: 359  TMILEAVADRDAWIWHVFFGMTGSHNDLNVLDRSPIFDDIVNDEAISCNYTVNGHHYDMG 180
            T+ILEAVA +D WIWH FFGM GSHND+NVL RSP+F  +   +A   NY++NGH Y MG
Sbjct: 712  TIILEAVASKDLWIWHAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNYSINGHDYMMG 771

Query: 179  YYLADGIYPNYATLIQTIAKPTIA*NKHFCK 87
            YYLADGIYP++AT ++TI +P     K+F K
Sbjct: 772  YYLADGIYPSWATFVKTIPEPHGNKRKYFAK 802



 Score = 28.9 bits (63), Expect(2) = 8e-67
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -1

Query: 105 KQTFL*RSKKMLEK-TERAFGILQSRWTILANPCR 4
           K+ +  ++++ + K  ERAFG+LQ+R+ I+  P R
Sbjct: 796 KRKYFAKAQEAVRKDVERAFGVLQARFAIVRGPAR 830


>ref|XP_003559567.1| PREDICTED: uncharacterized protein LOC100824438 [Brachypodium
           distachyon]
          Length = 426

 Score =  247 bits (630), Expect(2) = 1e-66
 Identities = 123/271 (45%), Positives = 162/271 (59%)
 Frame = -2

Query: 929 QQEAESSYRPHGGSKKGRKCKNRQYEATLARVNANYFGANPIFREHDFRRRFSMGQPLFT 750
           +++AE  YR   G+  G +  +R+      R+  +YF A P++    FRRRF M + +F 
Sbjct: 37  EEDAEPMYR---GATTGHRVLDRERAQGHIRLYKDYFAATPVYGPAMFRRRFRMAKHVFM 93

Query: 749 RIFNHLNHNVPYFQQKVNCAGKFGN*PKNESNCCYTNVYLWDCN*SSR*YVHVAEPTVYE 570
           RI N + +   YF  K +C G  G     +       V       +   Y+ ++E    E
Sbjct: 94  RIVNGIRNYDDYFILKRDCTGTLGFSSLQKCTAAIRMVGYGAPANAIDEYLRMSESVCVE 153

Query: 569 CMRYFCDGIIRIFGGEYLCKPNAVYIHRLLKEFEERGWPGMLGSIDCMHWQWKNCPSAWQ 390
            M  FC  ++++FG EYL +PNA    RL    E RG+PGMLG IDCMHW+WKNCP AWQ
Sbjct: 154 AMLRFCTAVVKVFGSEYLREPNAEDTTRLKAIGEARGFPGMLGCIDCMHWEWKNCPYAWQ 213

Query: 389 GSHTGHKHKPTMILEAVADRDAWIWHVFFGMTGSHNDLNVLDRSPIFDDIVNDEAISCNY 210
           G + GH  +PT+ILEAVA  D WIWH FFGM GSHND+NVL RSP+F  +    A  CN+
Sbjct: 214 GQYQGHVGEPTIILEAVASYDLWIWHSFFGMPGSHNDINVLQRSPLFARLAEGNAPECNF 273

Query: 209 TVNGHHYDMGYYLADGIYPNYATLIQTIAKP 117
            VNGH Y MGYYLADGIYP +AT ++TI+ P
Sbjct: 274 DVNGHPYTMGYYLADGIYPQWATFVKTISNP 304



 Score = 33.9 bits (76), Expect(2) = 1e-66
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -1

Query: 60  ERAFGILQSRWTILANPCRL 1
           ERAFG+LQSRW I+  P R+
Sbjct: 324 ERAFGVLQSRWAIVRGPARM 343


>gb|ABA95927.1| transposon protein, putative, Pong sub-class [Oryza sativa Japonica
           Group]
          Length = 450

 Score =  248 bits (633), Expect(2) = 7e-65
 Identities = 128/270 (47%), Positives = 161/270 (59%)
 Frame = -2

Query: 896 GGSKKGRKCKNRQYEATLARVNANYFGANPIFREHDFRRRFSMGQPLFTRIFNHLNHNVP 717
           GGS  G    NR+  A   R+  +YF   P + +  FRRRF M +PLF RI N +  +  
Sbjct: 45  GGSVIGHAVINRERLAGHRRLYNDYFSEEPTYLDVQFRRRFRMRRPLFLRIMNAIEAHDE 104

Query: 716 YFQQKVNCAGKFGN*PKNESNCCYTNVYLWDCN*SSR*YVHVAEPTVYECMRYFCDGIIR 537
           YF QK N AG  G     +       +       +   YV +   TV E    F   I  
Sbjct: 105 YFVQKRNAAGVLGLSCLQKVTAVSRMLCYGIAADAVDEYVRIGGSTVIESFNRFVVAIDE 164

Query: 536 IFGGEYLCKPNAVYIHRLLKEFEERGWPGMLGSIDCMHWQWKNCPSAWQGSHTGHKHKPT 357
           +FG EYL  PN   I RLL + EERG+PGMLGS+DCMHWQWKNCP+AWQG + G +  PT
Sbjct: 165 VFGEEYLRTPNENDIARLLAQGEERGFPGMLGSLDCMHWQWKNCPTAWQGQYKGKEGVPT 224

Query: 356 MILEAVADRDAWIWHVFFGMTGSHNDLNVLDRSPIFDDIVNDEAISCNYTVNGHHYDMGY 177
           ++LEAVA RD W WH FFG  GSHND+NVL RSP+F  +   +A   NY++NGH Y MGY
Sbjct: 225 IVLEAVASRDRWFWHAFFGSPGSHNDINVLQRSPLFAKLAEGQAPKVNYSINGHDYTMGY 284

Query: 176 YLADGIYPNYATLIQTIAKPTIA*NKHFCK 87
           YLADGIYP++ATL+++I  P     K+F K
Sbjct: 285 YLADGIYPSWATLVKSIKLPQGNKRKYFSK 314



 Score = 26.6 bits (57), Expect(2) = 7e-65
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 60  ERAFGILQSRWTILANPCR 4
           E+AFG+LQ+R+ I+  P R
Sbjct: 324 EQAFGVLQARFAIVRGPAR 342


>gb|ABA96831.1| transposon protein, putative, Pong sub-class [Oryza sativa Japonica
           Group]
          Length = 511

 Score =  246 bits (627), Expect(2) = 3e-64
 Identities = 127/270 (47%), Positives = 160/270 (59%)
 Frame = -2

Query: 896 GGSKKGRKCKNRQYEATLARVNANYFGANPIFREHDFRRRFSMGQPLFTRIFNHLNHNVP 717
           GGS  G    NR+  A   R+  +YF   P + +  FR RF M +PLF RI N +  +  
Sbjct: 106 GGSVIGHAVINRERLAGHRRLYNDYFSEEPTYLDVQFRHRFRMRRPLFLRIMNAIEAHDE 165

Query: 716 YFQQKVNCAGKFGN*PKNESNCCYTNVYLWDCN*SSR*YVHVAEPTVYECMRYFCDGIIR 537
           YF QK N AG  G     +       +       +   YV +   TV E    F   I  
Sbjct: 166 YFVQKRNVAGVLGLSCLQKVTAVSRMLCYGIAADAVDEYVRIGGSTVIESFNRFVVAIDE 225

Query: 536 IFGGEYLCKPNAVYIHRLLKEFEERGWPGMLGSIDCMHWQWKNCPSAWQGSHTGHKHKPT 357
           +FG EYL  PN   I RLL + EERG+PGMLGS+DCMHWQWKNCP+AWQG + G +  PT
Sbjct: 226 VFGEEYLRTPNENDIARLLAQGEERGFPGMLGSLDCMHWQWKNCPTAWQGQYKGKEGVPT 285

Query: 356 MILEAVADRDAWIWHVFFGMTGSHNDLNVLDRSPIFDDIVNDEAISCNYTVNGHHYDMGY 177
           ++LEAVA RD W WH FFG  GSHND+NVL RSP+F  +   +A   NY++NGH Y MGY
Sbjct: 286 IVLEAVASRDRWFWHAFFGSPGSHNDINVLQRSPLFAKLAEGQAPKVNYSINGHDYTMGY 345

Query: 176 YLADGIYPNYATLIQTIAKPTIA*NKHFCK 87
           YLADGIYP++ATL+++I  P     K+F K
Sbjct: 346 YLADGIYPSWATLVKSIKLPQGNKRKYFSK 375



 Score = 26.6 bits (57), Expect(2) = 3e-64
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 60  ERAFGILQSRWTILANPCR 4
           E+AFG+LQ+R+ I+  P R
Sbjct: 385 EQAFGVLQARFAIVRGPAR 403