BLASTX nr result

ID: Coptis24_contig00021279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021279
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC77118.1| hypothetical protein OsI_15544 [Oryza sativa Indi...    66   4e-09
ref|XP_003571899.1| PREDICTED: uncharacterized protein LOC100834...    65   7e-09
ref|XP_002275053.2| PREDICTED: uncharacterized protein LOC100256...    64   2e-08
ref|XP_003633694.1| PREDICTED: uncharacterized protein LOC100241...    64   2e-08
ref|XP_003594016.1| hypothetical protein MTR_2g020400 [Medicago ...    63   3e-08

>gb|EEC77118.1| hypothetical protein OsI_15544 [Oryza sativa Indica Group]
          Length = 844

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
 Frame = -2

Query: 545  GIPCIHAACVINQRRLHYASYCSEYLTVKAYSRS----VLPIPNDIDWGQPITEVL*PP- 381
            GIPC HA   I Q    +  Y  EY   +AY R+    V P+P +  W +  +  + PP 
Sbjct: 661  GIPCKHAISAIYQENQLHEQYVHEYYKKEAYLRTYSHMVYPVPKEDGWTRTDSPDIDPPR 720

Query: 380  LDRPVGRPKKNRRKDAYEGTKTMEGQTSAKPKAIRRCSKCQFTNHNVRTC---------- 231
              +  GRPKK+RR+ A  G +       A+   +  CS C+  NH  RTC          
Sbjct: 721  FRKQAGRPKKSRRRSA--GEEPTRASARARMNTV-TCSNCKLHNHTYRTCGKQLRPDLQL 777

Query: 230  --KGLSKKEQE-----AAKVTTVASEGPESST 156
              K L +K        A+ +   + E PESST
Sbjct: 778  RLKNLKRKRTSSVTDGASHLDQGSQEAPESST 809


>ref|XP_003571899.1| PREDICTED: uncharacterized protein LOC100834814 [Brachypodium
            distachyon]
          Length = 996

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
 Frame = -2

Query: 545  GIPCIHAACVINQRRLHYASYCSEY----LTVKAYSRSVLPIPNDIDWGQPITEVL*PP- 381
            G+PC HA C I + + H   Y S++    L ++ ++  V P+P   DW Q  T  + PP 
Sbjct: 729  GLPCKHAVCAIYKAKGHPEDYVSDFFKKPLYIQTHNEIVYPVPGQHDWVQTDTPDIDPPH 788

Query: 380  -LDRPVGRPKKNRRKDAYEGTKTMEGQTSAKPK-AIRRCSKCQFTNHNVRTCKGLSKKEQ 207
                P GR KKNRRK   E     +G+   K + +   CS C+   H   +C    K E 
Sbjct: 789  FFVHP-GRRKKNRRKGQDE-----QGEPRGKGRMSTSTCSNCKKQGHTYTSCANPLKPEL 842

Query: 206  EAAKVTTVASEG-PESSTAPRKKSQPRKTS 120
               K    ++ G P S+  P   +QP   S
Sbjct: 843  AIRKSRHKSNRGFPTSAATPAPAAQPTPAS 872


>ref|XP_002275053.2| PREDICTED: uncharacterized protein LOC100256986 [Vitis vinifera]
          Length = 1111

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/113 (36%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
 Frame = -2

Query: 542  IPCIHAACVINQRRLHYASYCSEYLTVKA----YSRSVLPIPNDIDWGQP----ITEVL* 387
            IPC HA        +   + CS+Y T KA    YS  + P  N+IDW  P       VL 
Sbjct: 1007 IPCAHAIAACRFYNISCYTLCSKYFTTKALLSSYSECIYPTGNEIDWVVPNHIRDKVVLP 1066

Query: 386  PPLDRPVGRPKKNRRKDAYEGTKTMEGQTSAKPKAIRRCSKCQFTNHNVRTCK 228
            P   RP GRP+K R     EG +T             RCS+C    HN +TCK
Sbjct: 1067 PKTRRPTGRPRKVRIPSGGEGKRT------------SRCSRCGQYGHNRKTCK 1107


>ref|XP_003633694.1| PREDICTED: uncharacterized protein LOC100241533 [Vitis vinifera]
          Length = 734

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/113 (36%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
 Frame = -2

Query: 542 IPCIHAACVINQRRLHYASYCSEYLTVKA----YSRSVLPIPNDIDWGQP----ITEVL* 387
           IPC HA        +   + CS+Y T KA    YS  + P  N+IDW  P       VL 
Sbjct: 630 IPCAHAIAACRFYNISCYTLCSKYFTTKALLSSYSECIYPTGNEIDWVVPNHIRDKVVLP 689

Query: 386 PPLDRPVGRPKKNRRKDAYEGTKTMEGQTSAKPKAIRRCSKCQFTNHNVRTCK 228
           P   RP GRP+K R     EG +T             RCS+C    HN +TCK
Sbjct: 690 PKTRRPTGRPRKVRIPSGGEGKRT------------SRCSRCGQYGHNRKTCK 730


>ref|XP_003594016.1| hypothetical protein MTR_2g020400 [Medicago truncatula]
           gi|355483064|gb|AES64267.1| hypothetical protein
           MTR_2g020400 [Medicago truncatula]
          Length = 181

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
 Frame = -2

Query: 542 IPCIHAACVINQRRLHYASYCSEYLTVKAY----SRSVLPIPNDIDWGQ-PITEVL*PPL 378
           +PC+HA   +  R      +C ++LT+ +Y    S  + P+ + I W   P  + + P +
Sbjct: 1   MPCMHACSALALRGFKSEDHCHDWLTLGSYRATYSYFIQPVNSQIYWEPTPYEKPVPPKV 60

Query: 377 DRPVGRPKKNRRKDAYEGTKTMEGQTSAKPKAIRRCSKCQFTNHNVRTCKGLSKKEQEAA 198
            R  GRPKKNRRKD  E  + + G    K     +C +C+   HN R+C       +   
Sbjct: 61  KRSAGRPKKNRRKDGNE--EPIGGSGMKKTYNDTQCGRCELMGHNSRSCAKQGVLRRPKN 118

Query: 197 KVTTVASEGPESSTA 153
            + T   E  +S+ A
Sbjct: 119 WIDTEPEEQVQSNVA 133


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