BLASTX nr result

ID: Coptis24_contig00021278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021278
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301867.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002510383.1| ATP binding protein, putative [Ricinus commu...    92   4e-17
ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 ...    89   4e-16
emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera]    89   4e-16
ref|XP_004165240.1| PREDICTED: LOW QUALITY PROTEIN: probable met...    83   2e-14

>ref|XP_002301867.1| predicted protein [Populus trichocarpa] gi|222843593|gb|EEE81140.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/93 (51%), Positives = 57/93 (61%)
 Frame = -3

Query: 279 NGGIEEDLDVDPLNEEKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFDTQAHYSWKMCR 100
           NG I+ D D+      +  D+ + E  E E A            GPVFD  AHYSW++C 
Sbjct: 183 NGDIQGDGDLI-----QNADQESVEEVEHESAGSKSTGKKRKIKGPVFDPNAHYSWRLCS 237

Query: 99  VRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1
            RSKHNY+PCIDIES T +LQSYRH ERSCPKT
Sbjct: 238 TRSKHNYMPCIDIESGTGRLQSYRHTERSCPKT 270


>ref|XP_002510383.1| ATP binding protein, putative [Ricinus communis]
           gi|223551084|gb|EEF52570.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 735

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = -3

Query: 306 VVDDHDGVTNGGIEEDLDVDPLNE--EKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFD 133
           VVD  + VT+G +E + D +      E  + E+ A   +DE A             P+FD
Sbjct: 169 VVDGREEVTDGQLEGNGDAEGEGGMIETMDQEATAAVEDDESAGKKKKQKIKG---PLFD 225

Query: 132 TQAHYSWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1
            +AHY+W++C  RSKHNYIPCIDIE+   +LQSYRH ERSCP+T
Sbjct: 226 PKAHYNWRLCSTRSKHNYIPCIDIENGNGRLQSYRHTERSCPRT 269


>ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 [Vitis vinifera]
           gi|302142491|emb|CBI19694.3| unnamed protein product
           [Vitis vinifera]
          Length = 724

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/99 (45%), Positives = 57/99 (57%)
 Frame = -3

Query: 297 DHDGVTNGGIEEDLDVDPLNEEKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFDTQAHY 118
           D +G  N  ++ D D     EE+P  +      E+E              GP+FD +A Y
Sbjct: 165 DREGEANEDVDADGDWAVTVEEEPVGK-----VEEESGGSKSTGKKKKRNGPLFDLKAQY 219

Query: 117 SWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1
           +WK+C  RSKHNYIPCID ES T +LQSYRH ERSCP+T
Sbjct: 220 TWKLCSTRSKHNYIPCIDNESGTGRLQSYRHRERSCPRT 258


>emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera]
          Length = 1762

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/99 (45%), Positives = 57/99 (57%)
 Frame = -3

Query: 297 DHDGVTNGGIEEDLDVDPLNEEKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFDTQAHY 118
           D +G  N  ++ D D     EE+P  +      E+E              GP+FD +A Y
Sbjct: 691 DREGEANEDVDADGDWAVTVEEEPVGK-----VEEESGGSKSTGKKKKRNGPLFDLKAQY 745

Query: 117 SWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1
           +WK+C  RSKHNYIPCID ES T +LQSYRH ERSCP+T
Sbjct: 746 TWKLCSTRSKHNYIPCIDNESGTGRLQSYRHRERSCPRT 784


>ref|XP_004165240.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase
           PMT28-like [Cucumis sativus]
          Length = 722

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/106 (44%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = -3

Query: 300 DDHDGVTNGGIEEDLDVDPLNEEKPEDESAAEYT------EDEDAXXXXXXXXXXXXG-P 142
           +D D       EE   VD    E  +DE+  E        E ED               P
Sbjct: 150 EDEDAEKGNEEEEQEVVDGQEGELKDDEAETEGDLGESDQEPEDRIEPKNXREKFKRKGP 209

Query: 141 VFDTQAHYSWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPK 4
           +FD  AHYSWK+CR RSK+NYIPCIDIES   + Q YRH ERSCP+
Sbjct: 210 LFDPNAHYSWKLCRARSKYNYIPCIDIESGVARQQGYRHRERSCPR 255


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