BLASTX nr result
ID: Coptis24_contig00021278
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021278 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301867.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 ref|XP_002510383.1| ATP binding protein, putative [Ricinus commu... 92 4e-17 ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 ... 89 4e-16 emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera] 89 4e-16 ref|XP_004165240.1| PREDICTED: LOW QUALITY PROTEIN: probable met... 83 2e-14 >ref|XP_002301867.1| predicted protein [Populus trichocarpa] gi|222843593|gb|EEE81140.1| predicted protein [Populus trichocarpa] Length = 736 Score = 94.7 bits (234), Expect = 7e-18 Identities = 48/93 (51%), Positives = 57/93 (61%) Frame = -3 Query: 279 NGGIEEDLDVDPLNEEKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFDTQAHYSWKMCR 100 NG I+ D D+ + D+ + E E E A GPVFD AHYSW++C Sbjct: 183 NGDIQGDGDLI-----QNADQESVEEVEHESAGSKSTGKKRKIKGPVFDPNAHYSWRLCS 237 Query: 99 VRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1 RSKHNY+PCIDIES T +LQSYRH ERSCPKT Sbjct: 238 TRSKHNYMPCIDIESGTGRLQSYRHTERSCPKT 270 >ref|XP_002510383.1| ATP binding protein, putative [Ricinus communis] gi|223551084|gb|EEF52570.1| ATP binding protein, putative [Ricinus communis] Length = 735 Score = 92.0 bits (227), Expect = 4e-17 Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%) Frame = -3 Query: 306 VVDDHDGVTNGGIEEDLDVDPLNE--EKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFD 133 VVD + VT+G +E + D + E + E+ A +DE A P+FD Sbjct: 169 VVDGREEVTDGQLEGNGDAEGEGGMIETMDQEATAAVEDDESAGKKKKQKIKG---PLFD 225 Query: 132 TQAHYSWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1 +AHY+W++C RSKHNYIPCIDIE+ +LQSYRH ERSCP+T Sbjct: 226 PKAHYNWRLCSTRSKHNYIPCIDIENGNGRLQSYRHTERSCPRT 269 >ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 [Vitis vinifera] gi|302142491|emb|CBI19694.3| unnamed protein product [Vitis vinifera] Length = 724 Score = 89.0 bits (219), Expect = 4e-16 Identities = 45/99 (45%), Positives = 57/99 (57%) Frame = -3 Query: 297 DHDGVTNGGIEEDLDVDPLNEEKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFDTQAHY 118 D +G N ++ D D EE+P + E+E GP+FD +A Y Sbjct: 165 DREGEANEDVDADGDWAVTVEEEPVGK-----VEEESGGSKSTGKKKKRNGPLFDLKAQY 219 Query: 117 SWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1 +WK+C RSKHNYIPCID ES T +LQSYRH ERSCP+T Sbjct: 220 TWKLCSTRSKHNYIPCIDNESGTGRLQSYRHRERSCPRT 258 >emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera] Length = 1762 Score = 89.0 bits (219), Expect = 4e-16 Identities = 45/99 (45%), Positives = 57/99 (57%) Frame = -3 Query: 297 DHDGVTNGGIEEDLDVDPLNEEKPEDESAAEYTEDEDAXXXXXXXXXXXXGPVFDTQAHY 118 D +G N ++ D D EE+P + E+E GP+FD +A Y Sbjct: 691 DREGEANEDVDADGDWAVTVEEEPVGK-----VEEESGGSKSTGKKKKRNGPLFDLKAQY 745 Query: 117 SWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPKT 1 +WK+C RSKHNYIPCID ES T +LQSYRH ERSCP+T Sbjct: 746 TWKLCSTRSKHNYIPCIDNESGTGRLQSYRHRERSCPRT 784 >ref|XP_004165240.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase PMT28-like [Cucumis sativus] Length = 722 Score = 83.2 bits (204), Expect = 2e-14 Identities = 47/106 (44%), Positives = 55/106 (51%), Gaps = 7/106 (6%) Frame = -3 Query: 300 DDHDGVTNGGIEEDLDVDPLNEEKPEDESAAEYT------EDEDAXXXXXXXXXXXXG-P 142 +D D EE VD E +DE+ E E ED P Sbjct: 150 EDEDAEKGNEEEEQEVVDGQEGELKDDEAETEGDLGESDQEPEDRIEPKNXREKFKRKGP 209 Query: 141 VFDTQAHYSWKMCRVRSKHNYIPCIDIESATRKLQSYRHHERSCPK 4 +FD AHYSWK+CR RSK+NYIPCIDIES + Q YRH ERSCP+ Sbjct: 210 LFDPNAHYSWKLCRARSKYNYIPCIDIESGVARQQGYRHRERSCPR 255