BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021275
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   336   5e-90
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   307   2e-81
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   306   4e-81
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   297   3e-78

>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  336 bits (862), Expect = 5e-90
 Identities = 197/382 (51%), Positives = 239/382 (62%), Gaps = 43/382 (11%)
 Frame = +1

Query: 1    REARRFSGSSPAVG---TSKVAAAEVI-------------------DAGGVELDKSSRKS 114
            RE RR SGSSP V    TSKVA  EV+                   D   ++ ++SSR+S
Sbjct: 104  REGRRLSGSSPTVASLATSKVAPGEVVGGNNGIAAMSERSGKSGLRDGRRIKREESSRRS 163

Query: 115  HRG-------------------NPALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSGF 237
             R                    N  ++ + E+KDK+ +  KGK  Q++  KTLSEQL  F
Sbjct: 164  MRTDLLGGYEEPSQDQDGNDSVNELVSGNSESKDKR-VKQKGKLRQEVLLKTLSEQLKEF 222

Query: 238  TLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXSR 417
             +D+D   +SH H + R TR E+  EE E S RGY    NR+KK               R
Sbjct: 223  PVDSD-AASSHIHLQGRRTRKERTGEEPEASIRGYCSGLNRIKKRKFRGARRNRAAIGLR 281

Query: 418  EFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGK 597
            + G  NE+SVASNS AQG    K  ME    E  E++VTRAP+NGCGIPWNWSRIHHRGK
Sbjct: 282  DIGAQNELSVASNSFAQGSVCLKNEMEEEREEYGERNVTRAPRNGCGIPWNWSRIHHRGK 341

Query: 598  SILDIAGRSLSCGLSDSRLRKGGCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSG 771
            + LD+AGRSLSCGLSDSRLR+GG + QG    DM    +HS +S KS+AE  PLLVE SG
Sbjct: 342  TFLDMAGRSLSCGLSDSRLRRGGSVPQGRDVSDMPMASDHSSASTKSDAEALPLLVEASG 401

Query: 772  SQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQK 951
            SQES++ AAWVH+YSGELGIFAD+ L+HD+DSDLASEARS +++  RGYR  RHQ+LTQK
Sbjct: 402  SQESTENAAWVHDYSGELGIFADNLLRHDIDSDLASEARSGDQRKFRGYRQDRHQNLTQK 461

Query: 952  YMPLTFRDLVGQNLAVQALSNA 1017
            YMP TF  LVGQNL  QALSNA
Sbjct: 462  YMPRTFGGLVGQNLVAQALSNA 483


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  307 bits (787), Expect = 2e-81
 Identities = 183/382 (47%), Positives = 230/382 (60%), Gaps = 43/382 (11%)
 Frame = +1

Query: 1    REARRFSGSSP---AVGTSKVAAAEVI-------------------DAGGVELDKSSRKS 114
            +E RR SG+SP   ++G+S+VA  E++                   D   V  ++S RK+
Sbjct: 104  KEGRRLSGTSPPLVSIGSSRVAPGEIVRGNDGITAPSERSSRSGMGDGRRVGREESGRKN 163

Query: 115  HRG-----NP---------ALTNDV-----EAKDKKNISPKGKQSQDLHPKTLSEQLSGF 237
             R      NP         +L  DV     E+K +K+   +GK  QD   KTLSEQL+  
Sbjct: 164  DRPDFLDVNPEEPLNQAGKSLAEDVISRHSESKARKS-KQRGKNVQDAQVKTLSEQLNDV 222

Query: 238  TLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXSR 417
             LD+DD+ +S+ H R R  R EK  +E E   R +    NR K+              SR
Sbjct: 223  PLDSDDLASSNIHFRGRFPRQEKIIKEVEARMRSHGSGMNRGKRRKFRSARRTRVATTSR 282

Query: 418  EFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGK 597
            +    NE+SVASNSLAQ     KY++E  D E  +++VTRAPKNGCGIPWNWSRIHHRGK
Sbjct: 283  DIVAENELSVASNSLAQASVHHKYHLEEAD-EFADENVTRAPKNGCGIPWNWSRIHHRGK 341

Query: 598  SILDIAGRSLSCGLSDSRLRKGGCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSG 771
            + LD+AGRSLSCGLSDSRL+KG   + G    +M      S S  +S+AE  PLLVE SG
Sbjct: 342  TFLDMAGRSLSCGLSDSRLKKGTFAANGRNISEMPVASERSSSCTRSDAEALPLLVEASG 401

Query: 772  SQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQK 951
            S  S++ A W H YSGELG+F D+  KHD+DSDLASEARS +++  RG RH RHQSLTQK
Sbjct: 402  SHASTENACWDHYYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQK 461

Query: 952  YMPLTFRDLVGQNLAVQALSNA 1017
            YMP TFRD+VGQNL  QALSNA
Sbjct: 462  YMPRTFRDMVGQNLVAQALSNA 483


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  306 bits (785), Expect = 4e-81
 Identities = 181/382 (47%), Positives = 230/382 (60%), Gaps = 43/382 (11%)
 Frame = +1

Query: 1    REARRFSGSSP---AVGTSKVAAAEVI-------------------DAGGVELDKSSRKS 114
            +E RR SG+SP   ++G+S+VA  E+                    D   V  ++S RK+
Sbjct: 104  KEGRRLSGTSPPLVSIGSSRVAPGEIGRGNDGITAPSERSSRSGLGDGRRVGREESGRKN 163

Query: 115  HR--------------GNPALTNDV-----EAKDKKNISPKGKQSQDLHPKTLSEQLSGF 237
             R              G  +L  DV     E+K +K+   +GK  +D   KTLSEQL+  
Sbjct: 164  DRPDFLDVNPEEPLYQGGKSLAEDVISRHSESKARKS-KQRGKNVRDAQVKTLSEQLNDV 222

Query: 238  TLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXSR 417
             LD+DD+ +S+ H R R  R EK  EE E+  R +    N+ K+              SR
Sbjct: 223  PLDSDDLASSNIHFRGRFPRQEKVIEEVESRMRSHGSGMNKGKRRKFRSVRRTRVATTSR 282

Query: 418  EFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGK 597
            + G  NE+SVASNSLA      KY++E  D E  +++VTRAPKNGCGIPWNWSRIHHRGK
Sbjct: 283  DIGAENEISVASNSLAH----HKYHLEEAD-EFADENVTRAPKNGCGIPWNWSRIHHRGK 337

Query: 598  SILDIAGRSLSCGLSDSRLRKGGCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSG 771
            + LD+AGRSLSCGLSDSRL+KG   + G    +M      S S  KS+AE  PLLVE SG
Sbjct: 338  TFLDLAGRSLSCGLSDSRLKKGTFTANGRNISEMPVASERSSSCTKSDAEALPLLVEASG 397

Query: 772  SQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQK 951
            S  S++ A W H+YSGELG+F D+  KHD+DSDLASEARS +++  RG RH RHQSLTQK
Sbjct: 398  SHASTENACWDHDYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQK 457

Query: 952  YMPLTFRDLVGQNLAVQALSNA 1017
            YMP TFRD++GQNL  QALSNA
Sbjct: 458  YMPQTFRDMIGQNLVAQALSNA 479


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  298 bits (762), Expect = 2e-78
 Identities = 193/385 (50%), Positives = 238/385 (61%), Gaps = 46/385 (11%)
 Frame = +1

Query: 1    REARR-FSGSSPA--VGTSKVAAAEVI--------------------DAGGVELDKSSRK 111
            RE RR F  SSP+  +  SKV  ++V                     D   V+ ++SS+K
Sbjct: 104  REGRRLFGSSSPSANLAPSKVVPSDVSGGNNDGVAAISDRSINSGFRDGRRVKREESSKK 163

Query: 112  SHR-------GNP------------ALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSG 234
            S+R       G+P             ++ + E+KD+K+   KGK SQD+H KTLSEQL  
Sbjct: 164  SNRVNQLGGDGDPLQDQAVDGLIHDTVSGNSESKDRKS-KHKGKHSQDVHIKTLSEQLHE 222

Query: 235  FTLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXS 414
              +DTD V +S+ H   R TR EK  E  ETS RGY       ++              S
Sbjct: 223  IPMDTD-VASSNMHLHGRHTRQEKIVEP-ETSIRGYGGVHRVRRRKFRSTRRTRASAPAS 280

Query: 415  REFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRG 594
            R+ G   E+SVASNS AQG  + +Y+ME  + E  +Q+VTRAP+NGCGIPWNWS IHHRG
Sbjct: 281  RDVGGQKEMSVASNSFAQGSARPRYHME--EEEYGDQNVTRAPRNGCGIPWNWSGIHHRG 338

Query: 595  KSILDIAGRSLSCGLSDSRLRKGGCISQGGLDMDG---ECNHSGSSAKSEAEGTPLLVEP 765
            K+ILDIAGRSLSCGLSD+R  KG   S G  D  G     + S SS KS+ E  PLLVE 
Sbjct: 339  KTILDIAGRSLSCGLSDTR--KGSTASHGR-DFPGMPVASDRSSSSTKSDVEALPLLVEA 395

Query: 766  SGSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHE-RQTGRGYRHRRHQSL 942
            SGSQES+D A WVH+YSGELGI+ADH LK+D+DSDLASEARS E R+ GR  ++ RHQ+L
Sbjct: 396  SGSQESTDNAGWVHDYSGELGIYADHLLKNDIDSDLASEARSGEQRKLGRN-QNGRHQNL 454

Query: 943  TQKYMPLTFRDLVGQNLAVQALSNA 1017
            TQ+YMP TFRDLVGQNLA QALSNA
Sbjct: 455  TQRYMPRTFRDLVGQNLAAQALSNA 479


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score =  297 bits (760), Expect = 3e-78
 Identities = 183/383 (47%), Positives = 231/383 (60%), Gaps = 44/383 (11%)
 Frame = +1

Query: 1    REARRFSGSSPA---VGTSKVAAAEVI--------------------DAGGVELDKSSRK 111
            RE RR SG SP    +  SKV   E+                     D   ++ ++SSRK
Sbjct: 104  REGRRLSGGSPPFANLAPSKVVPGELSGGYEGVAAAVSDRSSKSGARDGRRIKREESSRK 163

Query: 112  SHRG-------------------NPALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSG 234
            S+R                    N  ++ + E+K +K+   KGK SQD H KTLS+QL+ 
Sbjct: 164  SNRADLLGGDEDLSHNQEVNGLVNDDVSGNSESKSRKS-KHKGKHSQDFHIKTLSDQLNE 222

Query: 235  FTLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXS 414
              +D+D   +S+ H   R ++ +K  EE ETS RGY    NR K+              +
Sbjct: 223  IPMDSDVAASSNVHLHGRRSQQDKTGEERETSIRGY-SGINRTKRRKFRGARRTRATP-A 280

Query: 415  REFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRG 594
            R+    NE+SVASNSL QG  + +Y +E  + E  + +VTRAP+NGCGIPWNWSRIHHRG
Sbjct: 281  RDVEGQNEMSVASNSLNQGSVRPRYCIE--EEEYGDPNVTRAPRNGCGIPWNWSRIHHRG 338

Query: 595  KSILDIAGRSLSCGLSDSRLRKGGCIS--QGGLDMDGECNHSGSSAKSEAEGTPLLVEPS 768
            K+ LD+AGRSLSCGLSDSRLRKGG  S  +   +M    ++S SS KS+AE  PLLVE S
Sbjct: 339  KTFLDMAGRSLSCGLSDSRLRKGGMASHDRDAPNMPLASDYSCSSTKSDAEALPLLVEAS 398

Query: 769  GSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQ 948
             SQES+D A WVH+YSGELGI+ADH LK+D+DSDLASEARS  +   R   + RHQ+ TQ
Sbjct: 399  LSQESTDNAGWVHDYSGELGIYADHLLKNDVDSDLASEARSGGQHKLRRNHNSRHQNFTQ 458

Query: 949  KYMPLTFRDLVGQNLAVQALSNA 1017
            KYMP TFRDLVGQNL  QALSNA
Sbjct: 459  KYMPRTFRDLVGQNLVAQALSNA 481