BLASTX nr result
ID: Coptis24_contig00021275
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021275 (1018 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249... 336 5e-90 ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793... 307 2e-81 ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809... 306 4e-81 ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2... 298 2e-78 ref|XP_002522264.1| replication factor C / DNA polymerase III ga... 297 3e-78 >ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera] Length = 1161 Score = 336 bits (862), Expect = 5e-90 Identities = 197/382 (51%), Positives = 239/382 (62%), Gaps = 43/382 (11%) Frame = +1 Query: 1 REARRFSGSSPAVG---TSKVAAAEVI-------------------DAGGVELDKSSRKS 114 RE RR SGSSP V TSKVA EV+ D ++ ++SSR+S Sbjct: 104 REGRRLSGSSPTVASLATSKVAPGEVVGGNNGIAAMSERSGKSGLRDGRRIKREESSRRS 163 Query: 115 HRG-------------------NPALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSGF 237 R N ++ + E+KDK+ + KGK Q++ KTLSEQL F Sbjct: 164 MRTDLLGGYEEPSQDQDGNDSVNELVSGNSESKDKR-VKQKGKLRQEVLLKTLSEQLKEF 222 Query: 238 TLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXSR 417 +D+D +SH H + R TR E+ EE E S RGY NR+KK R Sbjct: 223 PVDSD-AASSHIHLQGRRTRKERTGEEPEASIRGYCSGLNRIKKRKFRGARRNRAAIGLR 281 Query: 418 EFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGK 597 + G NE+SVASNS AQG K ME E E++VTRAP+NGCGIPWNWSRIHHRGK Sbjct: 282 DIGAQNELSVASNSFAQGSVCLKNEMEEEREEYGERNVTRAPRNGCGIPWNWSRIHHRGK 341 Query: 598 SILDIAGRSLSCGLSDSRLRKGGCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSG 771 + LD+AGRSLSCGLSDSRLR+GG + QG DM +HS +S KS+AE PLLVE SG Sbjct: 342 TFLDMAGRSLSCGLSDSRLRRGGSVPQGRDVSDMPMASDHSSASTKSDAEALPLLVEASG 401 Query: 772 SQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQK 951 SQES++ AAWVH+YSGELGIFAD+ L+HD+DSDLASEARS +++ RGYR RHQ+LTQK Sbjct: 402 SQESTENAAWVHDYSGELGIFADNLLRHDIDSDLASEARSGDQRKFRGYRQDRHQNLTQK 461 Query: 952 YMPLTFRDLVGQNLAVQALSNA 1017 YMP TF LVGQNL QALSNA Sbjct: 462 YMPRTFGGLVGQNLVAQALSNA 483 >ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max] Length = 1191 Score = 307 bits (787), Expect = 2e-81 Identities = 183/382 (47%), Positives = 230/382 (60%), Gaps = 43/382 (11%) Frame = +1 Query: 1 REARRFSGSSP---AVGTSKVAAAEVI-------------------DAGGVELDKSSRKS 114 +E RR SG+SP ++G+S+VA E++ D V ++S RK+ Sbjct: 104 KEGRRLSGTSPPLVSIGSSRVAPGEIVRGNDGITAPSERSSRSGMGDGRRVGREESGRKN 163 Query: 115 HRG-----NP---------ALTNDV-----EAKDKKNISPKGKQSQDLHPKTLSEQLSGF 237 R NP +L DV E+K +K+ +GK QD KTLSEQL+ Sbjct: 164 DRPDFLDVNPEEPLNQAGKSLAEDVISRHSESKARKS-KQRGKNVQDAQVKTLSEQLNDV 222 Query: 238 TLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXSR 417 LD+DD+ +S+ H R R R EK +E E R + NR K+ SR Sbjct: 223 PLDSDDLASSNIHFRGRFPRQEKIIKEVEARMRSHGSGMNRGKRRKFRSARRTRVATTSR 282 Query: 418 EFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGK 597 + NE+SVASNSLAQ KY++E D E +++VTRAPKNGCGIPWNWSRIHHRGK Sbjct: 283 DIVAENELSVASNSLAQASVHHKYHLEEAD-EFADENVTRAPKNGCGIPWNWSRIHHRGK 341 Query: 598 SILDIAGRSLSCGLSDSRLRKGGCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSG 771 + LD+AGRSLSCGLSDSRL+KG + G +M S S +S+AE PLLVE SG Sbjct: 342 TFLDMAGRSLSCGLSDSRLKKGTFAANGRNISEMPVASERSSSCTRSDAEALPLLVEASG 401 Query: 772 SQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQK 951 S S++ A W H YSGELG+F D+ KHD+DSDLASEARS +++ RG RH RHQSLTQK Sbjct: 402 SHASTENACWDHYYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQK 461 Query: 952 YMPLTFRDLVGQNLAVQALSNA 1017 YMP TFRD+VGQNL QALSNA Sbjct: 462 YMPRTFRDMVGQNLVAQALSNA 483 >ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max] Length = 1101 Score = 306 bits (785), Expect = 4e-81 Identities = 181/382 (47%), Positives = 230/382 (60%), Gaps = 43/382 (11%) Frame = +1 Query: 1 REARRFSGSSP---AVGTSKVAAAEVI-------------------DAGGVELDKSSRKS 114 +E RR SG+SP ++G+S+VA E+ D V ++S RK+ Sbjct: 104 KEGRRLSGTSPPLVSIGSSRVAPGEIGRGNDGITAPSERSSRSGLGDGRRVGREESGRKN 163 Query: 115 HR--------------GNPALTNDV-----EAKDKKNISPKGKQSQDLHPKTLSEQLSGF 237 R G +L DV E+K +K+ +GK +D KTLSEQL+ Sbjct: 164 DRPDFLDVNPEEPLYQGGKSLAEDVISRHSESKARKS-KQRGKNVRDAQVKTLSEQLNDV 222 Query: 238 TLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXSR 417 LD+DD+ +S+ H R R R EK EE E+ R + N+ K+ SR Sbjct: 223 PLDSDDLASSNIHFRGRFPRQEKVIEEVESRMRSHGSGMNKGKRRKFRSVRRTRVATTSR 282 Query: 418 EFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRGK 597 + G NE+SVASNSLA KY++E D E +++VTRAPKNGCGIPWNWSRIHHRGK Sbjct: 283 DIGAENEISVASNSLAH----HKYHLEEAD-EFADENVTRAPKNGCGIPWNWSRIHHRGK 337 Query: 598 SILDIAGRSLSCGLSDSRLRKGGCISQGG--LDMDGECNHSGSSAKSEAEGTPLLVEPSG 771 + LD+AGRSLSCGLSDSRL+KG + G +M S S KS+AE PLLVE SG Sbjct: 338 TFLDLAGRSLSCGLSDSRLKKGTFTANGRNISEMPVASERSSSCTKSDAEALPLLVEASG 397 Query: 772 SQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQK 951 S S++ A W H+YSGELG+F D+ KHD+DSDLASEARS +++ RG RH RHQSLTQK Sbjct: 398 SHASTENACWDHDYSGELGLFGDNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQK 457 Query: 952 YMPLTFRDLVGQNLAVQALSNA 1017 YMP TFRD++GQNL QALSNA Sbjct: 458 YMPQTFRDMIGQNLVAQALSNA 479 >ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1| predicted protein [Populus trichocarpa] Length = 1190 Score = 298 bits (762), Expect = 2e-78 Identities = 193/385 (50%), Positives = 238/385 (61%), Gaps = 46/385 (11%) Frame = +1 Query: 1 REARR-FSGSSPA--VGTSKVAAAEVI--------------------DAGGVELDKSSRK 111 RE RR F SSP+ + SKV ++V D V+ ++SS+K Sbjct: 104 REGRRLFGSSSPSANLAPSKVVPSDVSGGNNDGVAAISDRSINSGFRDGRRVKREESSKK 163 Query: 112 SHR-------GNP------------ALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSG 234 S+R G+P ++ + E+KD+K+ KGK SQD+H KTLSEQL Sbjct: 164 SNRVNQLGGDGDPLQDQAVDGLIHDTVSGNSESKDRKS-KHKGKHSQDVHIKTLSEQLHE 222 Query: 235 FTLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXS 414 +DTD V +S+ H R TR EK E ETS RGY ++ S Sbjct: 223 IPMDTD-VASSNMHLHGRHTRQEKIVEP-ETSIRGYGGVHRVRRRKFRSTRRTRASAPAS 280 Query: 415 REFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRG 594 R+ G E+SVASNS AQG + +Y+ME + E +Q+VTRAP+NGCGIPWNWS IHHRG Sbjct: 281 RDVGGQKEMSVASNSFAQGSARPRYHME--EEEYGDQNVTRAPRNGCGIPWNWSGIHHRG 338 Query: 595 KSILDIAGRSLSCGLSDSRLRKGGCISQGGLDMDG---ECNHSGSSAKSEAEGTPLLVEP 765 K+ILDIAGRSLSCGLSD+R KG S G D G + S SS KS+ E PLLVE Sbjct: 339 KTILDIAGRSLSCGLSDTR--KGSTASHGR-DFPGMPVASDRSSSSTKSDVEALPLLVEA 395 Query: 766 SGSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHE-RQTGRGYRHRRHQSL 942 SGSQES+D A WVH+YSGELGI+ADH LK+D+DSDLASEARS E R+ GR ++ RHQ+L Sbjct: 396 SGSQESTDNAGWVHDYSGELGIYADHLLKNDIDSDLASEARSGEQRKLGRN-QNGRHQNL 454 Query: 943 TQKYMPLTFRDLVGQNLAVQALSNA 1017 TQ+YMP TFRDLVGQNLA QALSNA Sbjct: 455 TQRYMPRTFRDLVGQNLAAQALSNA 479 >ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] gi|223538517|gb|EEF40122.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] Length = 1105 Score = 297 bits (760), Expect = 3e-78 Identities = 183/383 (47%), Positives = 231/383 (60%), Gaps = 44/383 (11%) Frame = +1 Query: 1 REARRFSGSSPA---VGTSKVAAAEVI--------------------DAGGVELDKSSRK 111 RE RR SG SP + SKV E+ D ++ ++SSRK Sbjct: 104 REGRRLSGGSPPFANLAPSKVVPGELSGGYEGVAAAVSDRSSKSGARDGRRIKREESSRK 163 Query: 112 SHRG-------------------NPALTNDVEAKDKKNISPKGKQSQDLHPKTLSEQLSG 234 S+R N ++ + E+K +K+ KGK SQD H KTLS+QL+ Sbjct: 164 SNRADLLGGDEDLSHNQEVNGLVNDDVSGNSESKSRKS-KHKGKHSQDFHIKTLSDQLNE 222 Query: 235 FTLDTDDVQTSHFHSRERCTRLEKASEEAETSTRGYRKESNRMKKXXXXXXXXXXXXXXS 414 +D+D +S+ H R ++ +K EE ETS RGY NR K+ + Sbjct: 223 IPMDSDVAASSNVHLHGRRSQQDKTGEERETSIRGY-SGINRTKRRKFRGARRTRATP-A 280 Query: 415 REFGIHNEVSVASNSLAQGPKQSKYYMEGGDAEAVEQDVTRAPKNGCGIPWNWSRIHHRG 594 R+ NE+SVASNSL QG + +Y +E + E + +VTRAP+NGCGIPWNWSRIHHRG Sbjct: 281 RDVEGQNEMSVASNSLNQGSVRPRYCIE--EEEYGDPNVTRAPRNGCGIPWNWSRIHHRG 338 Query: 595 KSILDIAGRSLSCGLSDSRLRKGGCIS--QGGLDMDGECNHSGSSAKSEAEGTPLLVEPS 768 K+ LD+AGRSLSCGLSDSRLRKGG S + +M ++S SS KS+AE PLLVE S Sbjct: 339 KTFLDMAGRSLSCGLSDSRLRKGGMASHDRDAPNMPLASDYSCSSTKSDAEALPLLVEAS 398 Query: 769 GSQESSDKAAWVHEYSGELGIFADHYLKHDLDSDLASEARSHERQTGRGYRHRRHQSLTQ 948 SQES+D A WVH+YSGELGI+ADH LK+D+DSDLASEARS + R + RHQ+ TQ Sbjct: 399 LSQESTDNAGWVHDYSGELGIYADHLLKNDVDSDLASEARSGGQHKLRRNHNSRHQNFTQ 458 Query: 949 KYMPLTFRDLVGQNLAVQALSNA 1017 KYMP TFRDLVGQNL QALSNA Sbjct: 459 KYMPRTFRDLVGQNLVAQALSNA 481