BLASTX nr result

ID: Coptis24_contig00021274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021274
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002321596.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   173   1e-41
emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]    76   2e-12
emb|CAN71573.1| hypothetical protein VITISV_030365 [Vitis vinifera]    76   2e-12

>ref|XP_002334881.1| predicted protein [Populus trichocarpa] gi|222831996|gb|EEE70473.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/111 (81%), Positives = 99/111 (89%)
 Frame = +1

Query: 1   WSLNAQNRIRGRKRWGFISGTKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFL 180
           W+LNAQN+IRGRKRWGFISG+K AP + NSEEYEAWEDENCL+KSWLLDAM KDIRSIFL
Sbjct: 44  WALNAQNKIRGRKRWGFISGSKTAPNDTNSEEYEAWEDENCLIKSWLLDAMNKDIRSIFL 103

Query: 181 RLSMAKEIWDTAKQTYSVSQDASKGYQLYCEGISVHQNRGSVILYFGKLKK 333
           RL  AKEIWD AKQTYSVSQDASK YQLYCE ISV QN GS+I Y+GKL+K
Sbjct: 104 RLPTAKEIWDMAKQTYSVSQDASKSYQLYCEVISVRQNGGSIISYWGKLQK 154


>ref|XP_002321596.1| predicted protein [Populus trichocarpa] gi|222868592|gb|EEF05723.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  189 bits (479), Expect = 3e-46
 Identities = 89/111 (80%), Positives = 98/111 (88%)
 Frame = +1

Query: 1   WSLNAQNRIRGRKRWGFISGTKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFL 180
           W+LNAQN+IRG+KRW FISG+K AP + NSEEYEAWEDENCL+KSWLLDAM KDIRSIFL
Sbjct: 44  WALNAQNKIRGQKRWRFISGSKTAPNDTNSEEYEAWEDENCLIKSWLLDAMNKDIRSIFL 103

Query: 181 RLSMAKEIWDTAKQTYSVSQDASKGYQLYCEGISVHQNRGSVILYFGKLKK 333
           RL  AKEIWD AKQTYSVSQDASK YQLYCE ISV QN GS+I Y+GKL+K
Sbjct: 104 RLPTAKEIWDMAKQTYSVSQDASKSYQLYCEVISVRQNGGSIISYWGKLQK 154


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula]
           gi|355486266|gb|AES67469.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 2260

 Score =  173 bits (439), Expect = 1e-41
 Identities = 77/111 (69%), Positives = 93/111 (83%)
 Frame = +1

Query: 1   WSLNAQNRIRGRKRWGFISGTKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFL 180
           W+LNA+N+IRGRK WG+ISG K  P    S+EYE WEDENCLVKSWLLDAMTKD+RS+F+
Sbjct: 551 WALNAENKIRGRKHWGYISGKKVTPATKTSDEYETWEDENCLVKSWLLDAMTKDVRSLFI 610

Query: 181 RLSMAKEIWDTAKQTYSVSQDASKGYQLYCEGISVHQNRGSVILYFGKLKK 333
           RL  AK+IW++ K+TYSVSQDASK YQLYCE IS+ Q+ GSV+ YF KL+K
Sbjct: 611 RLPTAKKIWESVKETYSVSQDASKAYQLYCEVISIKQDGGSVVTYFAKLQK 661


>emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
          Length = 1636

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   WSLNAQNRIRGRKRWGFISGTKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFL 180
           WS +    IRG+++  +I+G  AAP    S  Y+ W  EN +V SWL+++MT DI   FL
Sbjct: 52  WSQSILMFIRGKEKDDYITGASAAPETTAST-YKKWIAENNMVMSWLVNSMTADIGENFL 110

Query: 181 RLSMAKEIWDTAKQTYSVSQDASKGYQLYCEGI--SVHQNRGSVILYFGKLKK 333
               AKEIWDTAK+T+S  ++ S+  Q+  EGI   + Q   +V  YF  L +
Sbjct: 111 SFDTAKEIWDTAKETFSDKENTSEIIQI--EGILHDLRQGNLTVTEYFNTLTR 161


>emb|CAN71573.1| hypothetical protein VITISV_030365 [Vitis vinifera]
          Length = 280

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   WSLNAQNRIRGRKRWGFISGTKAAPTNINSEEYEAWEDENCLVKSWLLDAMTKDIRSIFL 180
           WS +    IRG+++  +I+G  AAP    S  Y+ W  EN +V SWL+++MT DI   FL
Sbjct: 43  WSQSILMFIRGKEKDDYITGASAAPETTTST-YKKWIAENNMVMSWLVNSMTADIGENFL 101

Query: 181 RLSMAKEIWDTAKQTYSVSQDASKGYQLYCEGI--SVHQNRGSVILYFGKLKK 333
               AKEIWDTAK T+S  ++ S+  Q+  EGI   + Q   +V  YF  L +
Sbjct: 102 SFDTAKEIWDTAKDTFSDKENTSEIIQI--EGILHDLRQGNLTVTEYFNTLTR 152


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