BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021257
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]   166   5e-39
ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 prote...   163   3e-38
emb|CBI25438.3| unnamed protein product [Vitis vinifera]              163   3e-38
ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus com...   157   3e-36

>emb|CAN73339.1| hypothetical protein VITISV_042401 [Vitis vinifera]
          Length = 597

 Score =  166 bits (420), Expect = 5e-39
 Identities = 94/188 (50%), Positives = 119/188 (63%), Gaps = 5/188 (2%)
 Frame = +3

Query: 6   MNFPVNEFNQMFTPGNSGS---NE-RSIPSSGSGNGL-LHSTPVEQQXXXXXXXXXXXXH 170
           MN        +FTPGNSG    NE RS P S SG+G   H++ V               H
Sbjct: 421 MNDNARTTEAVFTPGNSGGATVNEVRSFPGSASGHGSPSHTSEVNS-----------GRH 469

Query: 171 GTSGLDPVAEEESFELLTPNFKLRRVSEDEPSHDQEMLIETGPTQTPLPIFYHPMDKTTD 350
             S L+PV EE  F    PNFKL ++SED    + E+L+ETGPTQT  PI   P++K TD
Sbjct: 470 SGSSLEPVDEEHPFNHTDPNFKLSKLSEDFMMPEHELLVETGPTQTQNPIIPPPIEKITD 529

Query: 351 SVRKHLKTHFDTVGGTEFESLNQLSDGMNQAKAAKLFYQICVLATRDFLKVKQTKAYGDI 530
           S+R HLKTHFDT G  + ESL+QL+ GM++ +AA+LFYQ CVLATR F+KV+Q + YGDI
Sbjct: 530 SIRMHLKTHFDTPGAPQRESLDQLASGMDRPRAAQLFYQTCVLATRGFIKVEQNEPYGDI 589

Query: 531 LIFKGSKM 554
           LI +G+KM
Sbjct: 590 LISRGAKM 597


>ref|XP_002273379.2| PREDICTED: sister chromatid cohesion 1 protein 1-like [Vitis
           vinifera]
          Length = 608

 Score =  163 bits (413), Expect = 3e-38
 Identities = 93/188 (49%), Positives = 117/188 (62%), Gaps = 5/188 (2%)
 Frame = +3

Query: 6   MNFPVNEFNQMFTPGNSGS---NE-RSIPSSGSGNGL-LHSTPVEQQXXXXXXXXXXXXH 170
           MN        +FTPGNSG    NE RS P S SG+G   H++ V               H
Sbjct: 427 MNDNARTTEAVFTPGNSGGATVNEVRSFPGSASGHGSPSHTSEVNSGRINKKRPYSWSRH 486

Query: 171 GTSGLDPVAEEESFELLTPNFKLRRVSEDEPSHDQEMLIETGPTQTPLPIFYHPMDKTTD 350
             S L+PV EE  F    PNFKL ++SE       E+L+ETGPTQT  PI   P++K TD
Sbjct: 487 SGSSLEPVDEEHPFNHTDPNFKLSKLSE------HELLVETGPTQTQNPIIPPPIEKITD 540

Query: 351 SVRKHLKTHFDTVGGTEFESLNQLSDGMNQAKAAKLFYQICVLATRDFLKVKQTKAYGDI 530
           S+R HLKTHFDT G  + ESL+QL+ GM++ +AA+LFYQ CVLATR F+KV+Q + YGDI
Sbjct: 541 SIRMHLKTHFDTPGAPQRESLDQLASGMDRPRAAQLFYQTCVLATRGFIKVEQNEPYGDI 600

Query: 531 LIFKGSKM 554
           LI +G+KM
Sbjct: 601 LISRGAKM 608


>emb|CBI25438.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  163 bits (413), Expect = 3e-38
 Identities = 93/188 (49%), Positives = 117/188 (62%), Gaps = 5/188 (2%)
 Frame = +3

Query: 6   MNFPVNEFNQMFTPGNSGS---NE-RSIPSSGSGNGL-LHSTPVEQQXXXXXXXXXXXXH 170
           MN        +FTPGNSG    NE RS P S SG+G   H++ V               H
Sbjct: 433 MNDNARTTEAVFTPGNSGGATVNEVRSFPGSASGHGSPSHTSEVNSGRINKKRPYSWSRH 492

Query: 171 GTSGLDPVAEEESFELLTPNFKLRRVSEDEPSHDQEMLIETGPTQTPLPIFYHPMDKTTD 350
             S L+PV EE  F    PNFKL ++SE       E+L+ETGPTQT  PI   P++K TD
Sbjct: 493 SGSSLEPVDEEHPFNHTDPNFKLSKLSE------HELLVETGPTQTQNPIIPPPIEKITD 546

Query: 351 SVRKHLKTHFDTVGGTEFESLNQLSDGMNQAKAAKLFYQICVLATRDFLKVKQTKAYGDI 530
           S+R HLKTHFDT G  + ESL+QL+ GM++ +AA+LFYQ CVLATR F+KV+Q + YGDI
Sbjct: 547 SIRMHLKTHFDTPGAPQRESLDQLASGMDRPRAAQLFYQTCVLATRGFIKVEQNEPYGDI 606

Query: 531 LIFKGSKM 554
           LI +G+KM
Sbjct: 607 LISRGAKM 614


>ref|XP_002312177.1| predicted protein [Populus trichocarpa] gi|222851997|gb|EEE89544.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  161 bits (407), Expect = 1e-37
 Identities = 87/174 (50%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
 Frame = +3

Query: 36  MFTPGNSGSNERSIPSSGSGNGLL-HSTPVEQQXXXXXXXXXXXXHGTSGLDPVAEEESF 212
           M TP NSG    SIPSSGSG+G+  H   V               H  S L+ V EE+ +
Sbjct: 432 MATPRNSGDGVGSIPSSGSGHGIPPHYLEVNLGRSSKKGRHSSSRHSGSSLETVVEEDPW 491

Query: 213 ELLTPNFKLRRVSEDEPSHDQEMLIETGPTQTPLPIFYHPMDKTTDSVRKHLKTHFDTVG 392
               PNF+L R+SE+ P+ DQE+L+ET PTQT   +   P+DK  DS+R  +KTHF+T G
Sbjct: 492 RFADPNFELSRLSENGPTPDQELLVETEPTQTQHHVVGQPVDKIADSIRMQMKTHFETPG 551

Query: 393 GTEFESLNQLSDGMNQAKAAKLFYQICVLATRDFLKVKQTKAYGDILIFKGSKM 554
             + ESLN L+ GMN   AA LFYQ CVLA+RDFL+V+Q   YGDILI KG+KM
Sbjct: 552 APQVESLNNLAAGMNTKAAALLFYQTCVLASRDFLRVEQKVPYGDILISKGAKM 605


>ref|XP_002520771.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223539902|gb|EEF41480.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 613

 Score =  157 bits (396), Expect = 3e-36
 Identities = 84/168 (50%), Positives = 109/168 (64%), Gaps = 1/168 (0%)
 Frame = +3

Query: 54  SGSNERSIPSSGSGNGL-LHSTPVEQQXXXXXXXXXXXXHGTSGLDPVAEEESFELLTPN 230
           +G   RSIPSSGSG+G+  H + V               H  S L+PV EE S++   PN
Sbjct: 449 TGDEVRSIPSSGSGHGMPSHQSEVHSARKRPYSGSR---HSGSSLEPVEEENSWQFPDPN 505

Query: 231 FKLRRVSEDEPSHDQEMLIETGPTQTPLPIFYHPMDKTTDSVRKHLKTHFDTVGGTEFES 410
           FKL R+SE + + DQE+L+ETGPTQT  PI   P+DK TD++R  +KTHF+T G    ES
Sbjct: 506 FKLARLSEKDLTPDQELLVETGPTQTQKPIINPPVDKMTDTIRMQMKTHFETPGAPAVES 565

Query: 411 LNQLSDGMNQAKAAKLFYQICVLATRDFLKVKQTKAYGDILIFKGSKM 554
           LN L+ GMN+  AA LFYQ CVLA+RD L+V+Q   YG+ILI +G K+
Sbjct: 566 LNNLAAGMNRKGAAMLFYQTCVLASRDCLRVEQKVPYGEILISRGEKL 613