BLASTX nr result

ID: Coptis24_contig00021250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021250
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246...   181   6e-44
ref|XP_002317524.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002533713.1| structural constituent of cell wall, putativ...   167   1e-39
gb|AFK40101.1| unknown [Lotus japonicus]                              166   2e-39
ref|XP_004150113.1| PREDICTED: uncharacterized protein LOC101217...   164   9e-39

>ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246927 [Vitis vinifera]
           gi|302143064|emb|CBI20359.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  181 bits (459), Expect = 6e-44
 Identities = 82/113 (72%), Positives = 98/113 (86%)
 Frame = +2

Query: 2   QDDKIHNYQIPSNDCFAHLELQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAMPVVGGE 181
           +DD+IHNYQIPS+DCFAHLE+QFRF GLS  VEGVLG+TY+PDF NP KPGVAMPVVGGE
Sbjct: 226 EDDRIHNYQIPSDDCFAHLEVQFRFFGLSSKVEGVLGQTYQPDFENPVKPGVAMPVVGGE 285

Query: 182 DKHKTTSLLSSDCASCLFSPGGVETKGNSIVMDFGTLDCGQGFSGGNGIVCRK 340
           DK++TTSLLS+DC SCLFSP GV  + ++++MD+GTLDC  G + G GIVCRK
Sbjct: 286 DKYRTTSLLSADCRSCLFSPAGVFDQKDTLIMDYGTLDCTGGATSGMGIVCRK 338


>ref|XP_002317524.1| predicted protein [Populus trichocarpa] gi|222860589|gb|EEE98136.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/113 (69%), Positives = 97/113 (85%)
 Frame = +2

Query: 2   QDDKIHNYQIPSNDCFAHLELQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAMPVVGGE 181
           +DD+IHNYQIPS+DCFAHLE+QF+F GLS  VEGV+GRTY+PDF NPAKPGVAMPVVGGE
Sbjct: 191 EDDRIHNYQIPSDDCFAHLEVQFQFFGLSSKVEGVIGRTYQPDFKNPAKPGVAMPVVGGE 250

Query: 182 DKHKTTSLLSSDCASCLFSPGGVETKGNSIVMDFGTLDCGQGFSGGNGIVCRK 340
           +  +TTSLLS+DC +C+FSP GV  + ++++MDFG LDC  G S G+GIVCRK
Sbjct: 251 EMFRTTSLLSADCGACVFSPAGVLDQKDTLLMDFGKLDCTGGSSSGHGIVCRK 303


>ref|XP_002533713.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223526387|gb|EEF28676.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 340

 Score =  167 bits (422), Expect = 1e-39
 Identities = 75/113 (66%), Positives = 91/113 (80%)
 Frame = +2

Query: 2   QDDKIHNYQIPSNDCFAHLELQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAMPVVGGE 181
           +DD++HNYQ+P+NDCF HLE+QFRF  LSP V+GVLGRTYRPDF NPAKPGVAMPV+GGE
Sbjct: 228 EDDRVHNYQVPANDCFVHLEVQFRFFNLSPKVDGVLGRTYRPDFENPAKPGVAMPVLGGE 287

Query: 182 DKHKTTSLLSSDCASCLFSPGGVETKGNSIVMDFGTLDCGQGFSGGNGIVCRK 340
           +K++T SLLS DC SC+FS      +  S  +D+GTLDC +G S G GIVCRK
Sbjct: 288 EKYRTPSLLSPDCQSCIFSTQSGSKQEASSSIDYGTLDCTRGASAGYGIVCRK 340


>gb|AFK40101.1| unknown [Lotus japonicus]
          Length = 340

 Score =  166 bits (419), Expect = 2e-39
 Identities = 77/113 (68%), Positives = 93/113 (82%)
 Frame = +2

Query: 2   QDDKIHNYQIPSNDCFAHLELQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAMPVVGGE 181
           +D +IHNYQIP +DCFAHLE+QF+F GLS  VEGVLGRTY+PDF NPAKPGVAMPVVGGE
Sbjct: 229 EDSRIHNYQIPDDDCFAHLEVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGE 288

Query: 182 DKHKTTSLLSSDCASCLFSPGGVETKGNSIVMDFGTLDCGQGFSGGNGIVCRK 340
           DK++TTSL S+DC+ C+FSP     K +S VM++G LDC  G + GNGIVCR+
Sbjct: 289 DKYRTTSLTSADCSVCMFSPAEAFEKEDS-VMEYGMLDCTGGANSGNGIVCRR 340


>ref|XP_004150113.1| PREDICTED: uncharacterized protein LOC101217774 [Cucumis sativus]
           gi|449476964|ref|XP_004154888.1| PREDICTED:
           uncharacterized protein LOC101227180 [Cucumis sativus]
          Length = 339

 Score =  164 bits (414), Expect = 9e-39
 Identities = 72/113 (63%), Positives = 93/113 (82%)
 Frame = +2

Query: 2   QDDKIHNYQIPSNDCFAHLELQFRFIGLSPDVEGVLGRTYRPDFVNPAKPGVAMPVVGGE 181
           +DD+IHNY+IP +DCFAHLE+QFRF GLS  VEGVLGRTY+PDF+NPAKPGVAMPVVGG+
Sbjct: 227 EDDRIHNYRIPKDDCFAHLEVQFRFHGLSSKVEGVLGRTYQPDFINPAKPGVAMPVVGGD 286

Query: 182 DKHKTTSLLSSDCASCLFSPGGVETKGNSIVMDFGTLDCGQGFSGGNGIVCRK 340
            +++T+SLLS+DC++CLFSP  +  K +  +  +  +DC  G + GNGIVCRK
Sbjct: 287 KEYRTSSLLSADCSACLFSPARISNKVDPKMRQYSFIDCSGGSTSGNGIVCRK 339


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