BLASTX nr result

ID: Coptis24_contig00021249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021249
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95015.1| unknown [Populus trichocarpa]                          112   3e-30
ref|XP_002325849.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-30
ref|XP_002319151.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-29
ref|XP_004141128.1| PREDICTED: lysosomal beta glucosidase-like [...   111   1e-29
ref|XP_004173112.1| PREDICTED: lysosomal beta glucosidase-like, ...   111   1e-29

>gb|ABK95015.1| unknown [Populus trichocarpa]
          Length = 626

 Score =  112 bits (280), Expect(2) = 3e-30
 Identities = 58/90 (64%), Positives = 64/90 (71%)
 Frame = -1

Query: 270 TVDPATHVVYRENPDAEFVKSNKFSYAIVVVGEPPYAETMGDNLNLRIPEPSPRTIANXX 91
           TVDP+T VVY+ENPDA+FVKSN FSYAIVVVGEPPYAET GD+LNL I EP P TI N  
Sbjct: 475 TVDPSTEVVYKENPDADFVKSNNFSYAIVVVGEPPYAETFGDSLNLTISEPGPSTIQNVC 534

Query: 90  XXXXXXXXXXXXXXXVIQPYLASMDALVAA 1
                          VIQPY++ MDALVAA
Sbjct: 535 GTVKCVTVIISGRPVVIQPYVSLMDALVAA 564



 Score = 44.7 bits (104), Expect(2) = 3e-30
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -3

Query: 343 WTIIWQGVSGNNVTSGTTILKGIRNS 266
           WTI WQG+ GNN+TSGTTIL  I+N+
Sbjct: 450 WTIEWQGLGGNNLTSGTTILTAIKNT 475


>ref|XP_002325849.1| predicted protein [Populus trichocarpa] gi|222862724|gb|EEF00231.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  112 bits (280), Expect(2) = 3e-30
 Identities = 58/90 (64%), Positives = 64/90 (71%)
 Frame = -1

Query: 270 TVDPATHVVYRENPDAEFVKSNKFSYAIVVVGEPPYAETMGDNLNLRIPEPSPRTIANXX 91
           TVDP+T VVY+ENPDA+FVKSN FSYAIVVVGEPPYAET GD+LNL I EP P TI N  
Sbjct: 462 TVDPSTEVVYKENPDADFVKSNNFSYAIVVVGEPPYAETFGDSLNLTISEPGPSTIQNVC 521

Query: 90  XXXXXXXXXXXXXXXVIQPYLASMDALVAA 1
                          VIQPY++ MDALVAA
Sbjct: 522 GTVKCVTVIISGRPVVIQPYVSLMDALVAA 551



 Score = 44.7 bits (104), Expect(2) = 3e-30
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -3

Query: 343 WTIIWQGVSGNNVTSGTTILKGIRNS 266
           WTI WQG+ GNN+TSGTTIL  I+N+
Sbjct: 437 WTIEWQGLGGNNLTSGTTILTAIKNT 462


>ref|XP_002319151.1| predicted protein [Populus trichocarpa] gi|222857527|gb|EEE95074.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  112 bits (279), Expect(2) = 1e-29
 Identities = 59/90 (65%), Positives = 63/90 (70%)
 Frame = -1

Query: 270 TVDPATHVVYRENPDAEFVKSNKFSYAIVVVGEPPYAETMGDNLNLRIPEPSPRTIANXX 91
           TVDP+T VVY+ENPDA+FVKSN FSYAIVVVGEPPYAET GD LNL I EP P TI N  
Sbjct: 452 TVDPSTEVVYKENPDADFVKSNNFSYAIVVVGEPPYAETFGDCLNLTISEPGPSTIQNVC 511

Query: 90  XXXXXXXXXXXXXXXVIQPYLASMDALVAA 1
                          VIQPYL+ MDALVAA
Sbjct: 512 GSVKCVTVISSGRPVVIQPYLSLMDALVAA 541



 Score = 43.1 bits (100), Expect(2) = 1e-29
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -3

Query: 343 WTIIWQGVSGNNVTSGTTILKGIRNS 266
           WTI WQG+SG N+TSGTTIL  I N+
Sbjct: 427 WTIEWQGLSGKNLTSGTTILTAIENT 452


>ref|XP_004141128.1| PREDICTED: lysosomal beta glucosidase-like [Cucumis sativus]
          Length = 628

 Score =  111 bits (278), Expect(2) = 1e-29
 Identities = 57/91 (62%), Positives = 65/91 (71%)
 Frame = -1

Query: 273 ETVDPATHVVYRENPDAEFVKSNKFSYAIVVVGEPPYAETMGDNLNLRIPEPSPRTIANX 94
           +TVDP T VV++ENPD EFVKSNKFSYAIVVVGE PYAET GD+LNL IPEP P TI N 
Sbjct: 476 DTVDPKTKVVFKENPDMEFVKSNKFSYAIVVVGEYPYAETFGDSLNLTIPEPGPSTITNV 535

Query: 93  XXXXXXXXXXXXXXXXVIQPYLASMDALVAA 1
                           V+QPY++S+DALVAA
Sbjct: 536 CGAVKCVVIVISGRPVVLQPYISSIDALVAA 566



 Score = 43.1 bits (100), Expect(2) = 1e-29
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = -3

Query: 343 WTIIWQGVSGNNVTSGTTILKGIRNS 266
           WTI WQG+ GNN+TSGTTIL  I+++
Sbjct: 452 WTIEWQGLGGNNLTSGTTILSAIKDT 477


>ref|XP_004173112.1| PREDICTED: lysosomal beta glucosidase-like, partial [Cucumis
           sativus]
          Length = 330

 Score =  111 bits (278), Expect(2) = 1e-29
 Identities = 57/91 (62%), Positives = 65/91 (71%)
 Frame = -1

Query: 273 ETVDPATHVVYRENPDAEFVKSNKFSYAIVVVGEPPYAETMGDNLNLRIPEPSPRTIANX 94
           +TVDP T VV++ENPD EFVKSNKFSYAIVVVGE PYAET GD+LNL IPEP P TI N 
Sbjct: 178 DTVDPKTKVVFKENPDMEFVKSNKFSYAIVVVGEYPYAETFGDSLNLTIPEPGPSTITNV 237

Query: 93  XXXXXXXXXXXXXXXXVIQPYLASMDALVAA 1
                           V+QPY++S+DALVAA
Sbjct: 238 CGAVKCVVIVISGRPVVLQPYISSIDALVAA 268



 Score = 43.1 bits (100), Expect(2) = 1e-29
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = -3

Query: 343 WTIIWQGVSGNNVTSGTTILKGIRNS 266
           WTI WQG+ GNN+TSGTTIL  I+++
Sbjct: 154 WTIEWQGLGGNNLTSGTTILSAIKDT 179


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