BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021248
         (1671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   211   4e-52
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   211   4e-52
ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   204   4e-50
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   203   1e-49
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]   203   1e-49

>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 428

 Score =  211 bits (538), Expect = 4e-52
 Identities = 138/394 (35%), Positives = 224/394 (56%), Gaps = 5/394 (1%)
 Frame = +1

Query: 172  PDYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSSRK--V 345
            PD IS+LP  II++I+  LPIK++VRTS+LSTKW+ +W T+PNL+FD  C+  +S    V
Sbjct: 16   PDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLV 75

Query: 346  LTDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDK 525
            +  K + IID VL  H+G I KFKLS   L      + ID W   L+++ +++  +EI K
Sbjct: 76   IKSKLSRIIDHVLLLHSGPIKKFKLSHREL---IGVTDIDRWTLHLTRRPVKEFVLEIWK 132

Query: 526  GCVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLA 705
            G  + +   LFSC+ L  L+L    +   P+ F GF++LK L L +V +    D +  L 
Sbjct: 133  GQRYKIPSCLFSCQGLHHLELFNCWLIP-PSTFQGFRNLKSLDLQHVTL--SQDAFENLI 189

Query: 706  SKCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRS 885
            S CPLLE+LT+ +     ++    P L++  + G F ++  +N   L V  I +     S
Sbjct: 190  STCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFES 249

Query: 886  LYEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLV 1065
                 RL  + T NL   L  LPRI++LE+ SY ++YL++G +PVKLPT  I L  + + 
Sbjct: 250  --SQGRLHGR-TSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR 306

Query: 1066 MDIGNINDLASAFCLFRSAPNLERVRI---GEWFSTPTSMEYADLFWHIQKKFLYRFNKL 1236
            ++  +  ++++A CLFRS+PNL  + I    E    P +  +AD +  +     +   ++
Sbjct: 307  INFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLA-HHADCWEDVYLD--WPVMRV 363

Query: 1237 KFLRLEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338
            + +R++ +S    E+  I +++ YSP LE + ++
Sbjct: 364  RHVRIDGISGIKPELDFISFILLYSPVLERMTVK 397


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 660

 Score =  211 bits (538), Expect = 4e-52
 Identities = 138/394 (35%), Positives = 224/394 (56%), Gaps = 5/394 (1%)
 Frame = +1

Query: 172  PDYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSSRK--V 345
            PD IS+LP  II++I+  LPIK++VRTS+LSTKW+ +W T+PNL+FD  C+  +S    V
Sbjct: 248  PDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLV 307

Query: 346  LTDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDK 525
            +  K + IID VL  H+G I KFKLS   L      + ID W   L+++ +++  +EI K
Sbjct: 308  IKSKLSRIIDHVLLLHSGPIKKFKLSHREL---IGVTDIDRWTLHLTRRPVKEFVLEIWK 364

Query: 526  GCVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLA 705
            G  + +   LFSC+ L  L+L    +   P+ F GF++LK L L +V +    D +  L 
Sbjct: 365  GQRYKIPSCLFSCQGLHHLELFNCWLIP-PSTFQGFRNLKSLDLQHVTL--SQDAFENLI 421

Query: 706  SKCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRS 885
            S CPLLE+LT+ +     ++    P L++  + G F ++  +N   L V  I +     S
Sbjct: 422  STCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFES 481

Query: 886  LYEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLV 1065
                 RL  + T NL   L  LPRI++LE+ SY ++YL++G +PVKLPT  I L  + + 
Sbjct: 482  --SQGRLHGR-TSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR 538

Query: 1066 MDIGNINDLASAFCLFRSAPNLERVRI---GEWFSTPTSMEYADLFWHIQKKFLYRFNKL 1236
            ++  +  ++++A CLFRS+PNL  + I    E    P +  +AD +  +     +   ++
Sbjct: 539  INFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLA-HHADCWEDVYLD--WPVMRV 595

Query: 1237 KFLRLEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338
            + +R++ +S    E+  I +++ YSP LE + ++
Sbjct: 596  RHVRIDGISGIKPELDFISFILLYSPVLERMTVK 629


>ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355477859|gb|AES59062.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 449

 Score =  204 bits (520), Expect = 4e-50
 Identities = 136/407 (33%), Positives = 227/407 (55%), Gaps = 11/407 (2%)
 Frame = +1

Query: 175  DYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSSRK---V 345
            D IS LP  +I++I+  +PIK++VRTSVLS+ W+N+W T+PNL+F++HC+  ++ K   V
Sbjct: 19   DRISCLPGHVIDQILSLMPIKEAVRTSVLSSSWRNKWYTLPNLVFNKHCISVAASKYTSV 78

Query: 346  LTDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYAC--SYIDHWIDVLSKKRIQDLSIEI 519
            + +KF  I+D VL QH+G I+KF LS         C  S +  W+  LS++ I++L +  
Sbjct: 79   INNKFLRIVDHVLLQHSGPINKFMLSDNENCLIRVCDVSDVHRWVLHLSRRSIKELLLHF 138

Query: 520  DKGCVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSL 699
                 + +  SLFSC++LR L L    ++ LP  F GFK+L+ L+L+ V +  +DDF ++
Sbjct: 139  WLDKRYKIPLSLFSCQSLRHLSLSCCQLK-LPTTFEGFKNLQYLHLEEVTL-AQDDFENM 196

Query: 700  LASKCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRT 879
            + S CPLL+ L +  +     +    P L      G F ++  +N+  +    + +S   
Sbjct: 197  I-SGCPLLDHLVLMKIDGFSQINVHAPNLSTFQFYGKFEDISFQNSSQIYTVYVDLSIYL 255

Query: 880  RSLYEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIF 1059
             S     +L    + NL    A  P I+ LE+  Y ++YL+   +PVKLP   I L E+ 
Sbjct: 256  NSKSNQSKLHGCSS-NLLKFFAHQPHIQFLEIGYYFLKYLAADDVPVKLPAPCISLCELS 314

Query: 1060 LVMDIGNINDLASAFCLFRSAPNLERVRIGEWFS------TPTSMEYADLFWHIQKKFLY 1221
            L ++  ++ ++++A CL RS+PNL+++ I           TPTS  + D+F         
Sbjct: 315  LCINFNDLKEISAALCLLRSSPNLKKLEIFARIEEETVLLTPTSYCWEDIFSGPAMPI-- 372

Query: 1222 RFNKLKFLRLEQLSCWTSEVLLIDYMMRYSPHLEELIIEVKETVNTQ 1362
               +++ + ++ +S   SE+  I +++RYSP LE++I  VK  VN Q
Sbjct: 373  ---QVQHVTIDGISGIRSELDFIRFLLRYSPVLEKMI--VKHVVNVQ 414


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
            vinifera]
          Length = 416

 Score =  203 bits (516), Expect = 1e-49
 Identities = 132/390 (33%), Positives = 220/390 (56%), Gaps = 2/390 (0%)
 Frame = +1

Query: 175  DYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSS--RKVL 348
            D ISNLP  II++I+  L I+D+VR SVLS+KW+ +W+T+P L+FD  C+  SS  + ++
Sbjct: 6    DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65

Query: 349  TDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDKG 528
             +K   IID VL  HTG I KF+LS    +     S ID WI  LS+  I++  +EI KG
Sbjct: 66   KNKLVNIIDHVLLLHTGPIHKFRLS---HRDFLGGSDIDRWILYLSRTPIREFILEIWKG 122

Query: 529  CVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLAS 708
              + +   L++C++L  L+L   L++  P  F GF  LK L L ++I+  +D F +L++S
Sbjct: 123  QHYKLPSCLYNCQSLIHLELFNSLLKP-PPTFKGFMSLKSLDLQHIIM-AQDAFENLISS 180

Query: 709  KCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRSL 888
             CPLLEK T+ +      +    P L++    G+F ++  +N   L    I +      +
Sbjct: 181  -CPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYV---DI 236

Query: 889  YEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLVM 1068
               K L    + NL    A LPRI++LE+ SY ++YL+ G +P KLP   I L  + + +
Sbjct: 237  TNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLTHLSIRI 296

Query: 1069 DIGNINDLASAFCLFRSAPNLERVRIGEWFSTPTSMEYADLFWHIQKKFLYRFNKLKFLR 1248
            +  ++ +  +A CL RS+PNL+ + +       T +E +   W  ++ + Y F  L+ ++
Sbjct: 297  NFSSVEENLTALCLLRSSPNLQELEMLARPEEQTLLETSTTLWK-KEHWNYSFAHLRVVK 355

Query: 1249 LEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338
            L  +S    ++  I++++ YSP LE++ ++
Sbjct: 356  LTGISGVGPQLDFINFLLAYSPVLEKMTVK 385


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score =  203 bits (516), Expect = 1e-49
 Identities = 132/390 (33%), Positives = 220/390 (56%), Gaps = 2/390 (0%)
 Frame = +1

Query: 175  DYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSS--RKVL 348
            D ISNLP  II++I+  L I+D+VR SVLS+KW+ +W+T+P L+FD  C+  SS  + ++
Sbjct: 6    DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65

Query: 349  TDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDKG 528
             +K   IID VL  HTG I KF+LS    +     S ID WI  LS+  I++  +EI KG
Sbjct: 66   KNKLVNIIDHVLLLHTGPIHKFRLS---HRDFLGGSDIDRWILYLSRTPIREFILEIWKG 122

Query: 529  CVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLAS 708
              + +   L++C++L  L+L   L++  P  F GF  LK L L ++I+  +D F +L++S
Sbjct: 123  QHYKLPSCLYNCQSLIHLELFNSLLKP-PPTFKGFXSLKSLDLQHIIM-AQDAFENLISS 180

Query: 709  KCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRSL 888
             CPLLEK T+ +      +    P L++    G+F ++  +N   L    I +      +
Sbjct: 181  -CPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYV---DI 236

Query: 889  YEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLVM 1068
               K L    + NL    A LPRI++LE+ SY ++YL+ G +P KLP   I L  + + +
Sbjct: 237  TNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLTHLSIRI 296

Query: 1069 DIGNINDLASAFCLFRSAPNLERVRIGEWFSTPTSMEYADLFWHIQKKFLYRFNKLKFLR 1248
            +  ++ +  +A CL RS+PNL+ + +       T +E +   W  ++ + Y F  L+ ++
Sbjct: 297  NFSSVEENLTALCLLRSSPNLQELEMLARPEEQTLLETSTTLWK-KEHWNYXFAHLRVVK 355

Query: 1249 LEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338
            L  +S    ++  I++++ YSP LE++ ++
Sbjct: 356  LTGISGVGPQLDFINFLLAYSPVLEKMTVK 385