BLASTX nr result
ID: Coptis24_contig00021248
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021248 (1671 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 211 4e-52 ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 211 4e-52 ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 204 4e-50 ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 203 1e-49 emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera] 203 1e-49 >ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 428 Score = 211 bits (538), Expect = 4e-52 Identities = 138/394 (35%), Positives = 224/394 (56%), Gaps = 5/394 (1%) Frame = +1 Query: 172 PDYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSSRK--V 345 PD IS+LP II++I+ LPIK++VRTS+LSTKW+ +W T+PNL+FD C+ +S V Sbjct: 16 PDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLV 75 Query: 346 LTDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDK 525 + K + IID VL H+G I KFKLS L + ID W L+++ +++ +EI K Sbjct: 76 IKSKLSRIIDHVLLLHSGPIKKFKLSHREL---IGVTDIDRWTLHLTRRPVKEFVLEIWK 132 Query: 526 GCVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLA 705 G + + LFSC+ L L+L + P+ F GF++LK L L +V + D + L Sbjct: 133 GQRYKIPSCLFSCQGLHHLELFNCWLIP-PSTFQGFRNLKSLDLQHVTL--SQDAFENLI 189 Query: 706 SKCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRS 885 S CPLLE+LT+ + ++ P L++ + G F ++ +N L V I + S Sbjct: 190 STCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFES 249 Query: 886 LYEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLV 1065 RL + T NL L LPRI++LE+ SY ++YL++G +PVKLPT I L + + Sbjct: 250 --SQGRLHGR-TSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR 306 Query: 1066 MDIGNINDLASAFCLFRSAPNLERVRI---GEWFSTPTSMEYADLFWHIQKKFLYRFNKL 1236 ++ + ++++A CLFRS+PNL + I E P + +AD + + + ++ Sbjct: 307 INFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLA-HHADCWEDVYLD--WPVMRV 363 Query: 1237 KFLRLEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338 + +R++ +S E+ I +++ YSP LE + ++ Sbjct: 364 RHVRIDGISGIKPELDFISFILLYSPVLERMTVK 397 >ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 660 Score = 211 bits (538), Expect = 4e-52 Identities = 138/394 (35%), Positives = 224/394 (56%), Gaps = 5/394 (1%) Frame = +1 Query: 172 PDYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSSRK--V 345 PD IS+LP II++I+ LPIK++VRTS+LSTKW+ +W T+PNL+FD C+ +S V Sbjct: 248 PDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLV 307 Query: 346 LTDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDK 525 + K + IID VL H+G I KFKLS L + ID W L+++ +++ +EI K Sbjct: 308 IKSKLSRIIDHVLLLHSGPIKKFKLSHREL---IGVTDIDRWTLHLTRRPVKEFVLEIWK 364 Query: 526 GCVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLA 705 G + + LFSC+ L L+L + P+ F GF++LK L L +V + D + L Sbjct: 365 GQRYKIPSCLFSCQGLHHLELFNCWLIP-PSTFQGFRNLKSLDLQHVTL--SQDAFENLI 421 Query: 706 SKCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRS 885 S CPLLE+LT+ + ++ P L++ + G F ++ +N L V I + S Sbjct: 422 STCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFES 481 Query: 886 LYEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLV 1065 RL + T NL L LPRI++LE+ SY ++YL++G +PVKLPT I L + + Sbjct: 482 --SQGRLHGR-TSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIR 538 Query: 1066 MDIGNINDLASAFCLFRSAPNLERVRI---GEWFSTPTSMEYADLFWHIQKKFLYRFNKL 1236 ++ + ++++A CLFRS+PNL + I E P + +AD + + + ++ Sbjct: 539 INFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLA-HHADCWEDVYLD--WPVMRV 595 Query: 1237 KFLRLEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338 + +R++ +S E+ I +++ YSP LE + ++ Sbjct: 596 RHVRIDGISGIKPELDFISFILLYSPVLERMTVK 629 >ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355477859|gb|AES59062.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 449 Score = 204 bits (520), Expect = 4e-50 Identities = 136/407 (33%), Positives = 227/407 (55%), Gaps = 11/407 (2%) Frame = +1 Query: 175 DYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSSRK---V 345 D IS LP +I++I+ +PIK++VRTSVLS+ W+N+W T+PNL+F++HC+ ++ K V Sbjct: 19 DRISCLPGHVIDQILSLMPIKEAVRTSVLSSSWRNKWYTLPNLVFNKHCISVAASKYTSV 78 Query: 346 LTDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYAC--SYIDHWIDVLSKKRIQDLSIEI 519 + +KF I+D VL QH+G I+KF LS C S + W+ LS++ I++L + Sbjct: 79 INNKFLRIVDHVLLQHSGPINKFMLSDNENCLIRVCDVSDVHRWVLHLSRRSIKELLLHF 138 Query: 520 DKGCVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSL 699 + + SLFSC++LR L L ++ LP F GFK+L+ L+L+ V + +DDF ++ Sbjct: 139 WLDKRYKIPLSLFSCQSLRHLSLSCCQLK-LPTTFEGFKNLQYLHLEEVTL-AQDDFENM 196 Query: 700 LASKCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRT 879 + S CPLL+ L + + + P L G F ++ +N+ + + +S Sbjct: 197 I-SGCPLLDHLVLMKIDGFSQINVHAPNLSTFQFYGKFEDISFQNSSQIYTVYVDLSIYL 255 Query: 880 RSLYEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIF 1059 S +L + NL A P I+ LE+ Y ++YL+ +PVKLP I L E+ Sbjct: 256 NSKSNQSKLHGCSS-NLLKFFAHQPHIQFLEIGYYFLKYLAADDVPVKLPAPCISLCELS 314 Query: 1060 LVMDIGNINDLASAFCLFRSAPNLERVRIGEWFS------TPTSMEYADLFWHIQKKFLY 1221 L ++ ++ ++++A CL RS+PNL+++ I TPTS + D+F Sbjct: 315 LCINFNDLKEISAALCLLRSSPNLKKLEIFARIEEETVLLTPTSYCWEDIFSGPAMPI-- 372 Query: 1222 RFNKLKFLRLEQLSCWTSEVLLIDYMMRYSPHLEELIIEVKETVNTQ 1362 +++ + ++ +S SE+ I +++RYSP LE++I VK VN Q Sbjct: 373 ---QVQHVTIDGISGIRSELDFIRFLLRYSPVLEKMI--VKHVVNVQ 414 >ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis vinifera] Length = 416 Score = 203 bits (516), Expect = 1e-49 Identities = 132/390 (33%), Positives = 220/390 (56%), Gaps = 2/390 (0%) Frame = +1 Query: 175 DYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSS--RKVL 348 D ISNLP II++I+ L I+D+VR SVLS+KW+ +W+T+P L+FD C+ SS + ++ Sbjct: 6 DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65 Query: 349 TDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDKG 528 +K IID VL HTG I KF+LS + S ID WI LS+ I++ +EI KG Sbjct: 66 KNKLVNIIDHVLLLHTGPIHKFRLS---HRDFLGGSDIDRWILYLSRTPIREFILEIWKG 122 Query: 529 CVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLAS 708 + + L++C++L L+L L++ P F GF LK L L ++I+ +D F +L++S Sbjct: 123 QHYKLPSCLYNCQSLIHLELFNSLLKP-PPTFKGFMSLKSLDLQHIIM-AQDAFENLISS 180 Query: 709 KCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRSL 888 CPLLEK T+ + + P L++ G+F ++ +N L I + + Sbjct: 181 -CPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYV---DI 236 Query: 889 YEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLVM 1068 K L + NL A LPRI++LE+ SY ++YL+ G +P KLP I L + + + Sbjct: 237 TNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLTHLSIRI 296 Query: 1069 DIGNINDLASAFCLFRSAPNLERVRIGEWFSTPTSMEYADLFWHIQKKFLYRFNKLKFLR 1248 + ++ + +A CL RS+PNL+ + + T +E + W ++ + Y F L+ ++ Sbjct: 297 NFSSVEENLTALCLLRSSPNLQELEMLARPEEQTLLETSTTLWK-KEHWNYSFAHLRVVK 355 Query: 1249 LEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338 L +S ++ I++++ YSP LE++ ++ Sbjct: 356 LTGISGVGPQLDFINFLLAYSPVLEKMTVK 385 >emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera] Length = 416 Score = 203 bits (516), Expect = 1e-49 Identities = 132/390 (33%), Positives = 220/390 (56%), Gaps = 2/390 (0%) Frame = +1 Query: 175 DYISNLPDGIIEEIIQRLPIKDSVRTSVLSTKWKNRWMTIPNLIFDEHCMRQSS--RKVL 348 D ISNLP II++I+ L I+D+VR SVLS+KW+ +W+T+P L+FD C+ SS + ++ Sbjct: 6 DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65 Query: 349 TDKFAGIIDQVLAQHTGRIDKFKLSVYYLKAEYACSYIDHWIDVLSKKRIQDLSIEIDKG 528 +K IID VL HTG I KF+LS + S ID WI LS+ I++ +EI KG Sbjct: 66 KNKLVNIIDHVLLLHTGPIHKFRLS---HRDFLGGSDIDRWILYLSRTPIREFILEIWKG 122 Query: 529 CVFVVTDSLFSCKNLRILKLRQVLIRHLPAAFNGFKHLKDLYLDYVIIHCEDDFYSLLAS 708 + + L++C++L L+L L++ P F GF LK L L ++I+ +D F +L++S Sbjct: 123 QHYKLPSCLYNCQSLIHLELFNSLLKP-PPTFKGFXSLKSLDLQHIIM-AQDAFENLISS 180 Query: 709 KCPLLEKLTMKDMGKAPFVVQVPPTLKYLHLIGMFTNMRIENAEFLTVFVIRVSTRTRSL 888 CPLLEK T+ + + P L++ G+F ++ +N L I + + Sbjct: 181 -CPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYV---DI 236 Query: 889 YEVKRLQKKETCNLSIVLAFLPRIEKLELWSYAMEYLSIGFIPVKLPTMLIYLKEIFLVM 1068 K L + NL A LPRI++LE+ SY ++YL+ G +P KLP I L + + + Sbjct: 237 TNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLTHLSIRI 296 Query: 1069 DIGNINDLASAFCLFRSAPNLERVRIGEWFSTPTSMEYADLFWHIQKKFLYRFNKLKFLR 1248 + ++ + +A CL RS+PNL+ + + T +E + W ++ + Y F L+ ++ Sbjct: 297 NFSSVEENLTALCLLRSSPNLQELEMLARPEEQTLLETSTTLWK-KEHWNYXFAHLRVVK 355 Query: 1249 LEQLSCWTSEVLLIDYMMRYSPHLEELIIE 1338 L +S ++ I++++ YSP LE++ ++ Sbjct: 356 LTGISGVGPQLDFINFLLAYSPVLEKMTVK 385