BLASTX nr result

ID: Coptis24_contig00021224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021224
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59
ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256...   233   5e-59
gb|ABK23005.1| unknown [Picea sitchensis]                             226   3e-57
gb|AFK41697.1| unknown [Medicago truncatula]                          225   8e-57
ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260...   225   8e-57

>ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|222869756|gb|EEF06887.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  233 bits (595), Expect = 3e-59
 Identities = 110/144 (76%), Positives = 125/144 (86%)
 Frame = +1

Query: 148 MGTSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDS 327
           MG+SGFF+IC+LHSV+ALT G LMMFY NE ++F HGIE A KL GSTPHD LL+QT+DS
Sbjct: 1   MGSSGFFLICMLHSVMALTCGALMMFYTNEATVFGHGIEIATKLKGSTPHDQLLVQTSDS 60

Query: 328 FAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQ 507
           F+GLLL AIG  LFMV+FVKDREFQSFFAKGCV++HV  A WR YFER+LEDL+RD PR 
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHVSMAFWRIYFERKLEDLARDLPRL 120

Query: 508 VVGDILLAVSWVFFLVYSWREKYD 579
           VVGDI LA+SWVFFLVYSWREKYD
Sbjct: 121 VVGDIALALSWVFFLVYSWREKYD 144


>ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256771 [Vitis vinifera]
           gi|297735997|emb|CBI23971.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score =  233 bits (593), Expect = 5e-59
 Identities = 111/147 (75%), Positives = 130/147 (88%), Gaps = 1/147 (0%)
 Frame = +1

Query: 142 QTMGTS-GFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQT 318
           Q+MG+S GFF+ICLLHS+IALT G LMMFY+ E+  F HG ETA KLLGSTPHD LLI+T
Sbjct: 4   QSMGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIRT 63

Query: 319 TDSFAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDW 498
           +DSF+GLLL AIG  LFMV+FV+DR+FQSFFAKGC+V+HV  A+WRFYFERR+EDL+ DW
Sbjct: 64  SDSFSGLLLFAIGFLLFMVAFVRDRDFQSFFAKGCIVLHVSMALWRFYFERRVEDLALDW 123

Query: 499 PRQVVGDILLAVSWVFFLVYSWREKYD 579
            RQ+VGDILLA+SWVFFLVYSWREKYD
Sbjct: 124 LRQIVGDILLALSWVFFLVYSWREKYD 150


>gb|ABK23005.1| unknown [Picea sitchensis]
          Length = 143

 Score =  226 bits (577), Expect = 3e-57
 Identities = 102/139 (73%), Positives = 124/139 (89%)
 Frame = +1

Query: 163 FFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDSFAGLL 342
           F ++CLLHSV A+ SG LMMF+  EVSIF HG ETANKLLGSTPHD LLIQT+DS AG+L
Sbjct: 5   FSLVCLLHSVTAVVSGCLMMFFWREVSIFGHGKETANKLLGSTPHDQLLIQTSDSLAGML 64

Query: 343 LCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQVVGDI 522
           L ++G+ LFMVSFV+DREFQSFFAKGC+V+H + A+WRFYF RR+EDL+RDWPRQ+VGDI
Sbjct: 65  LFSVGIMLFMVSFVRDREFQSFFAKGCIVLHTLMALWRFYFARRVEDLARDWPRQLVGDI 124

Query: 523 LLAVSWVFFLVYSWREKYD 579
           ++++SWVFFLVY+WREKYD
Sbjct: 125 IMSLSWVFFLVYNWREKYD 143


>gb|AFK41697.1| unknown [Medicago truncatula]
          Length = 145

 Score =  225 bits (574), Expect = 8e-57
 Identities = 103/142 (72%), Positives = 123/142 (86%)
 Frame = +1

Query: 154 TSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDSFA 333
           +S FF+IC+LHS+IA+TSG LMMFY+ EV  F HG++TA KLLGSTPHD LLI+T+DSF+
Sbjct: 4   SSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSDSFS 63

Query: 334 GLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQVV 513
           GLLL AIG  LFMVSFVKDR+FQ FFAKGC ++HV  A+WR YFER++EDL+ DW RQ V
Sbjct: 64  GLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLRQTV 123

Query: 514 GDILLAVSWVFFLVYSWREKYD 579
           GD+LLA+SWVFFLVYSWREKYD
Sbjct: 124 GDVLLALSWVFFLVYSWREKYD 145


>ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260596 [Vitis vinifera]
          Length = 144

 Score =  225 bits (574), Expect = 8e-57
 Identities = 105/144 (72%), Positives = 122/144 (84%)
 Frame = +1

Query: 148 MGTSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDS 327
           MG++ FF+ C LHSVIALT G LMMFY NE+ +F HG E A KL GSTPHD LLI+T+DS
Sbjct: 1   MGSAAFFLTCSLHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 328 FAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQ 507
           F+GLLL AIG  LFMV+FVKDREFQSFFAKGCV +HV  A+WR YFER+LEDL+ DWP+Q
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQ 120

Query: 508 VVGDILLAVSWVFFLVYSWREKYD 579
           VVGDI+LA+SWVF +VYSWREKYD
Sbjct: 121 VVGDIVLALSWVFLVVYSWREKYD 144


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