BLASTX nr result
ID: Coptis24_contig00021220
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021220 (1585 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi... 455 e-125 emb|CBI38862.3| unnamed protein product [Vitis vinifera] 450 e-124 ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2... 398 e-108 ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containi... 390 e-106 ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containi... 381 e-103 >ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Vitis vinifera] Length = 352 Score = 455 bits (1171), Expect = e-125 Identities = 233/346 (67%), Positives = 275/346 (79%) Frame = +3 Query: 9 QKKYKWIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWV 188 +K+YKWI+IGPNI+EAQ+ ISQ+ KM+KR KA +KQIICF E++ LS +L +WV Sbjct: 6 KKRYKWIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWV 62 Query: 189 KIMKPRRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHD 368 KIMKPRRADWL VLKE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL D Sbjct: 63 KIMKPRRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQD 122 Query: 369 AEITLQAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIM 548 AE TL AMK+RGF CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIM Sbjct: 123 AENTLSAMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIM 182 Query: 549 AYVRAGMPDRGEILLGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFDAIQFARISP 728 AY+RAGMPD+GEIL+ EMEA+EIYAG+EVYKALLRAYS + GAQRVFDAIQFA ISP Sbjct: 183 AYIRAGMPDQGEILVKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISP 242 Query: 729 DVKLCALLINAHRVAGQSDGARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXX 908 DVKLCALLINA+RVAGQ+ A FENMRR+GL P+DK +AL+LAAY Sbjct: 243 DVKLCALLINAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFL 302 Query: 909 XXXXXXNFVLGKEGSEVLVCWFRRLGVVDEVALVLKEYAAKEIKCE 1046 VLGKE SE+L WF+RLGVV EV LVL+EY+AKE CE Sbjct: 303 IDLERDGIVLGKEASELLAAWFQRLGVVKEVELVLREYSAKEASCE 348 >emb|CBI38862.3| unnamed protein product [Vitis vinifera] Length = 353 Score = 450 bits (1158), Expect = e-124 Identities = 231/342 (67%), Positives = 273/342 (79%) Frame = +3 Query: 9 QKKYKWIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWV 188 +K+YKWI+IGPNI+EAQ+ ISQ+ KM+KR KA +KQIICF E++ LS +L +WV Sbjct: 6 KKRYKWIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWV 62 Query: 189 KIMKPRRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHD 368 KIMKPRRADWL VLKE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL D Sbjct: 63 KIMKPRRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQD 122 Query: 369 AEITLQAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIM 548 AE TL AMK+RGF CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIM Sbjct: 123 AENTLSAMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIM 182 Query: 549 AYVRAGMPDRGEILLGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFDAIQFARISP 728 AY+RAGMPD+GEIL+ EMEA+EIYAG+EVYKALLRAYS + GAQRVFDAIQFA ISP Sbjct: 183 AYIRAGMPDQGEILVKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISP 242 Query: 729 DVKLCALLINAHRVAGQSDGARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXX 908 DVKLCALLINA+RVAGQ+ A FENMRR+GL P+DK +AL+LAAY Sbjct: 243 DVKLCALLINAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFL 302 Query: 909 XXXXXXNFVLGKEGSEVLVCWFRRLGVVDEVALVLKEYAAKE 1034 VLGKE SE+L WF+RLGVV EV LVL+EY+AKE Sbjct: 303 IDLERDGIVLGKEASELLAAWFQRLGVVKEVELVLREYSAKE 344 >ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1| predicted protein [Populus trichocarpa] Length = 407 Score = 398 bits (1023), Expect = e-108 Identities = 205/338 (60%), Positives = 256/338 (75%) Frame = +3 Query: 15 KYKWIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKI 194 K++W++IGPNI E Q++AISQLP KM+KR KA M+QIICF+ +K G +L +L +WVKI Sbjct: 72 KFRWVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFN--DKKG-SLRGLLSAWVKI 128 Query: 195 MKPRRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAE 374 MKPRR DWL +LKE++K+E PL EV E ALLE+SFEAN+RDYTK+I Y N+L +AE Sbjct: 129 MKPRRKDWLSILKELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIHFYGMNNQLEEAE 188 Query: 375 ITLQAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAY 554 T AM++RGF DQ+TLT +I+MYSK G+L AEE FEELKLLG PLD+R+YG+MIMAY Sbjct: 189 RTRLAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPLDRRSYGSMIMAY 248 Query: 555 VRAGMPDRGEILLGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDV 734 +RAGMP++GE++L EM+AQEI AG EVYKALLRAYS +G+ GAQRVFDAIQ A I PD Sbjct: 249 IRAGMPEKGEMILREMDAQEIRAGSEVYKALLRAYSIIGDADGAQRVFDAIQLAGIPPDD 308 Query: 735 KLCALLINAHRVAGQSDGARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXX 914 + CA+L+NA+ +AGQS A FENM RAG+ P+D+CVAL+LAAY Sbjct: 309 RTCAVLLNAYGMAGQSQNAYATFENMWRAGIEPTDRCVALVLAAYEKENKLNQALDFLIG 368 Query: 915 XXXXNFVLGKEGSEVLVCWFRRLGVVDEVALVLKEYAA 1028 ++GKE SEVL WF RLGVV EV LVL+EYAA Sbjct: 369 LEREKLIIGKEASEVLAEWFGRLGVVKEVELVLREYAA 406 >ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Cucumis sativus] gi|449480346|ref|XP_004155867.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Cucumis sativus] Length = 404 Score = 390 bits (1001), Expect = e-106 Identities = 201/341 (58%), Positives = 254/341 (74%) Frame = +3 Query: 15 KYKWIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKI 194 +++W+++G +I+E Q++AISQLPPKM+KR KA MKQIICF S + G LS +L +WV+I Sbjct: 65 RFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICF--SPQKG-ELSDMLAAWVRI 121 Query: 195 MKPRRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAE 374 MKP RADWLLVLK + L PL +V E AL E +FEAN RDYTK+I Y KQN+L DAE Sbjct: 122 MKPERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAE 181 Query: 375 ITLQAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAY 554 L +M++RGF CDQITLT +I++YSKA L A++ FEELKLL PLDKR++GAMIMAY Sbjct: 182 KVLLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRSFGAMIMAY 241 Query: 555 VRAGMPDRGEILLGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDV 734 VRAG P+ GE +L EM+A++IYAG EVYKALLRAYS +GN GAQRVFDAIQ A I+PD Sbjct: 242 VRAGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAITPDE 301 Query: 735 KLCALLINAHRVAGQSDGARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXX 914 KLC LLINA+ +AGQS A+ F+NMRRAG+ PSDKC+AL L+AY Sbjct: 302 KLCGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLID 361 Query: 915 XXXXNFVLGKEGSEVLVCWFRRLGVVDEVALVLKEYAAKEI 1037 N ++GKE S++L W +RLGVV+EV +VL+EY KE+ Sbjct: 362 LEKDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKEV 402 >ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Glycine max] Length = 356 Score = 381 bits (978), Expect = e-103 Identities = 193/343 (56%), Positives = 253/343 (73%) Frame = +3 Query: 9 QKKYKWIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWV 188 +++Y+WI++G N+++ Q++AIS+LP +M+ R KA M+QIICF +EK T+S +LRSWV Sbjct: 14 ERRYRWIEVGKNVTKEQQQAISKLPFRMADRSKALMRQIICFS-AEKG--TISDLLRSWV 70 Query: 189 KIMKPRRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHD 368 K+MKP RADWL VLKE+ E P EV ++ LLE+SFE NIRDYTK+I Y + N L D Sbjct: 71 KLMKPTRADWLSVLKELRTTEHPFYLEVAKHTLLEESFEVNIRDYTKIIHYYGEHNLLED 130 Query: 369 AEITLQAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIM 548 AE L MK+RGF DQ+ LT +++M SKAG+ ++A+E FEE+KLLG PLDKR+YG+MIM Sbjct: 131 AEKFLTLMKQRGFIYDQVILTTMVHMSSKAGNHDRAKEYFEEIKLLGEPLDKRSYGSMIM 190 Query: 549 AYVRAGMPDRGEILLGEMEAQEIYAGKEVYKALLRAYSTLGNTLGAQRVFDAIQFARISP 728 AY+RAGMP+ GE LL +MEAQEI AG E+YKALLRAYS +GN GAQRVFDAIQ A I+P Sbjct: 191 AYIRAGMPEEGENLLQQMEAQEILAGSEIYKALLRAYSMIGNAEGAQRVFDAIQLAGITP 250 Query: 729 DVKLCALLINAHRVAGQSDGARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXX 908 D K+C+LL+NA+ +AGQS A FENMRRAG+ PSDKC+A +L AY Sbjct: 251 DDKICSLLVNAYAMAGQSQKALIAFENMRRAGIKPSDKCIASVLVAYEKESKINTALEFL 310 Query: 909 XXXXXXNFVLGKEGSEVLVCWFRRLGVVDEVALVLKEYAAKEI 1037 ++G+E S VL WFR+LGVV+EV LVL+++A E+ Sbjct: 311 IDLERDGIMVGEEASAVLAKWFRKLGVVEEVELVLRDFAIIEV 353