BLASTX nr result

ID: Coptis24_contig00021213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021213
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr...   140   8e-32
ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel...   139   2e-31
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   139   3e-31
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              139   3e-31
tpg|DAA64150.1| TPA: hypothetical protein ZEAMMB73_018829 [Zea m...   135   5e-30

>ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
           helicase homolog [Glycine max]
          Length = 920

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/100 (66%), Positives = 81/100 (81%)
 Frame = +1

Query: 19  QREAIIESLMAAQKYCLLTSCRRKFLLEYFGEKSASSXXXXXXXXXXIKKERDMSREVYL 198
           QR+AI+ESL+AA++YC+LT+CRRKFLLEYFGEK  +            +KERDMSRE +L
Sbjct: 357 QRKAIMESLLAAERYCVLTTCRRKFLLEYFGEKFPADRCGNCDNCKISRKERDMSREAFL 416

Query: 199 LMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLH 318
           LM+CI SC G WGLNMPIDVLRGSRSKK+++ Q+DKLPLH
Sbjct: 417 LMACIHSCRGGWGLNMPIDVLRGSRSKKILDVQFDKLPLH 456


>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 920

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/100 (65%), Positives = 81/100 (81%)
 Frame = +1

Query: 19  QREAIIESLMAAQKYCLLTSCRRKFLLEYFGEKSASSXXXXXXXXXXIKKERDMSREVYL 198
           QR+AI+ESL+AA++YC+LT+CRRKFLLEYFGEK  +            +KERDMSRE +L
Sbjct: 357 QRKAIMESLLAAERYCVLTTCRRKFLLEYFGEKFPADRCGNCDNCKISRKERDMSREAFL 416

Query: 199 LMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLH 318
           LM+CI SC G WGLNMPIDVLRGSR+KK+++ Q+DKLPLH
Sbjct: 417 LMACIHSCRGIWGLNMPIDVLRGSRAKKILDVQFDKLPLH 456


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
           vinifera]
          Length = 913

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/106 (61%), Positives = 81/106 (76%)
 Frame = +1

Query: 1   GESQGIQREAIIESLMAAQKYCLLTSCRRKFLLEYFGEKSASSXXXXXXXXXXIKKERDM 180
           GE+ G QR AI++SL+AAQ YCL T+CRRKFLLEYFGEK  S            K+E DM
Sbjct: 345 GEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLEYFGEKFESDKCGNCDNCTISKRECDM 404

Query: 181 SREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLH 318
           SRE +LL++CI SC G WGLNMPID+LRGSRSK++++ ++DKLPLH
Sbjct: 405 SREAFLLIACINSCRGHWGLNMPIDILRGSRSKRILDAKFDKLPLH 450


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/106 (61%), Positives = 81/106 (76%)
 Frame = +1

Query: 1   GESQGIQREAIIESLMAAQKYCLLTSCRRKFLLEYFGEKSASSXXXXXXXXXXIKKERDM 180
           GE+ G QR AI++SL+AAQ YCL T+CRRKFLLEYFGEK  S            K+E DM
Sbjct: 345 GEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLEYFGEKFESDKCGNCDNCTISKRECDM 404

Query: 181 SREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLH 318
           SRE +LL++CI SC G WGLNMPID+LRGSRSK++++ ++DKLPLH
Sbjct: 405 SREAFLLIACINSCRGHWGLNMPIDILRGSRSKRILDAKFDKLPLH 450


>tpg|DAA64150.1| TPA: hypothetical protein ZEAMMB73_018829 [Zea mays]
          Length = 898

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/100 (62%), Positives = 81/100 (81%)
 Frame = +1

Query: 19  QREAIIESLMAAQKYCLLTSCRRKFLLEYFGEKSASSXXXXXXXXXXIKKERDMSREVYL 198
           QR+AI++S MAAQKYCLL +CRR+FLL+YFGE+  +           +K ERD+S+EV+L
Sbjct: 352 QRKAIMDSFMAAQKYCLLATCRRRFLLQYFGEEW-NIDCGNCDNCTAVKNERDLSKEVFL 410

Query: 199 LMSCIGSCGGRWGLNMPIDVLRGSRSKKVIENQYDKLPLH 318
           L+SCI SCGGRWGLN+PIDVLRGSR+KK+++N YDKL +H
Sbjct: 411 LLSCIKSCGGRWGLNLPIDVLRGSRAKKIVDNNYDKLQMH 450


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