BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021207
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei...   178   9e-43
gb|AFK40678.1| unknown [Lotus japonicus]                              173   3e-41
ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin...   161   1e-37
ref|XP_002888931.1| RNA recognition motif-containing protein [Ar...   139   8e-31

>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|296088019|emb|CBI35302.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  178 bits (452), Expect = 9e-43
 Identities = 88/114 (77%), Positives = 100/114 (87%)
 Frame = +2

Query: 179 NDCFVVGCLPSSPSQKTGSSTNLFVSGLSFRTTEEGLRNAFQNFGQLVDVNLVMDRIANR 358
           ND F V CLPSSP+Q +   T L+VSGLSFRTTEE LRNAF+ FGQLV+VNLVMD+IANR
Sbjct: 59  NDLFAVACLPSSPNQPSIPKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANR 118

Query: 359 PRGFAFVRYATEEESSKAIEGMHGKFLDGRVIFVEIAKPRSEMRQDRKQPPRRY 520
           PRGFAF+RY+TEEES KAIEGMHGKFLDGRVIFVE+AKPRSE+RQ++ Q  RRY
Sbjct: 119 PRGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAKPRSELRQNQNQ--RRY 170


>gb|AFK40678.1| unknown [Lotus japonicus]
          Length = 187

 Score =  173 bits (439), Expect = 3e-41
 Identities = 91/136 (66%), Positives = 105/136 (77%), Gaps = 10/136 (7%)
 Frame = +2

Query: 128 HSKFPSLSLSETKCKIRNDCFVVGCLP-------SSPSQKTGSS---TNLFVSGLSFRTT 277
           H K P  S   +  +I+  C+++ CLP       SSPS K  SS   T L+VSGLSFRTT
Sbjct: 47  HRKTPFPSSLSSPHRIQGSCYLLACLPPSSESSSSSPSAKPSSSAPSTRLYVSGLSFRTT 106

Query: 278 EEGLRNAFQNFGQLVDVNLVMDRIANRPRGFAFVRYATEEESSKAIEGMHGKFLDGRVIF 457
           EE LRN F+NFGQLVDVNLVMD++ANRPRGFAF+RYATEEES KAIEGMHGKFLDGRVIF
Sbjct: 107 EESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIF 166

Query: 458 VEIAKPRSEMRQDRKQ 505
           VE+AKPRSE+RQ  +Q
Sbjct: 167 VEVAKPRSELRQRFQQ 182


>ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|222859004|gb|EEE96551.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  164 bits (415), Expect = 2e-38
 Identities = 87/133 (65%), Positives = 99/133 (74%), Gaps = 12/133 (9%)
 Frame = +2

Query: 131 SKFPSLSLS-------ETKCKIRNDCFVVGCLPSSPSQKTG-----SSTNLFVSGLSFRT 274
           S+FP  +L+       E  C     C V+ CLPSS S  +        T L+VSGLSFRT
Sbjct: 45  SRFPYFTLNYIERQRLENSCSC---CSVLACLPSSASSPSSFGFNFRKTKLYVSGLSFRT 101

Query: 275 TEEGLRNAFQNFGQLVDVNLVMDRIANRPRGFAFVRYATEEESSKAIEGMHGKFLDGRVI 454
           TEE LRNAFQNFGQLVDVNLVMD++A RPRGFAF+RY TEEE+ KAIEGMHGKFLDGRVI
Sbjct: 102 TEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEGMHGKFLDGRVI 161

Query: 455 FVEIAKPRSEMRQ 493
           FVE+AKPRSE+RQ
Sbjct: 162 FVEVAKPRSELRQ 174


>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
           gi|255625921|gb|ACU13305.1| unknown [Glycine max]
          Length = 180

 Score =  161 bits (408), Expect = 1e-37
 Identities = 88/142 (61%), Positives = 102/142 (71%), Gaps = 12/142 (8%)
 Frame = +2

Query: 125 FHSKFPSLSLSETKCKIRN--DCFVVGCLPSSPSQKTGSST----------NLFVSGLSF 268
           F +K  + S   +   +RN   C V+ CLP  P   T SST           L+VSGLSF
Sbjct: 40  FQTKNRTTSFPSSSSILRNKASCSVLACLP--PESSTSSSTAKPSFPSPQTKLYVSGLSF 97

Query: 269 RTTEEGLRNAFQNFGQLVDVNLVMDRIANRPRGFAFVRYATEEESSKAIEGMHGKFLDGR 448
           RTTEE LRNAF+NFGQLV+V LVMDRIANRPRGFAF+RYATEEES KAIEGMHGKFLDGR
Sbjct: 98  RTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFLDGR 157

Query: 449 VIFVEIAKPRSEMRQDRKQPPR 514
           VIFVE+AKPRSE+   +++  R
Sbjct: 158 VIFVEVAKPRSELAPRKQEDTR 179


>ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334772|gb|EFH65190.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 181

 Score =  139 bits (349), Expect = 8e-31
 Identities = 65/100 (65%), Positives = 84/100 (84%)
 Frame = +2

Query: 209 SSPSQKTGSSTNLFVSGLSFRTTEEGLRNAFQNFGQLVDVNLVMDRIANRPRGFAFVRYA 388
           S PS  +G+ T L+VSGLSFRTTE+ LR+ F+ FG+L+ +NLVMD++ANRPRGFAF+RY 
Sbjct: 67  SPPSSPSGTKTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYE 126

Query: 389 TEEESSKAIEGMHGKFLDGRVIFVEIAKPRSEMRQDRKQP 508
           TEEE+ KAI+GMHGKFLDGRVIFVE AK RS++ + + +P
Sbjct: 127 TEEEAMKAIQGMHGKFLDGRVIFVEEAKTRSDISRAKPRP 166