BLASTX nr result

ID: Coptis24_contig00021204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021204
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX16990.1| MADS1 protein [Eschscholzia californica] gi|3431...   270   2e-70
ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor ...   268   1e-69
emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]   265   5e-69
emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160...   243   3e-62
ref|XP_002522456.1| mads box protein, putative [Ricinus communis...   239   3e-61

>emb|CAX16990.1| MADS1 protein [Eschscholzia californica]
           gi|343160543|emb|CAX16991.1| MADS1 protein [Eschscholzia
           californica]
          Length = 361

 Score =  270 bits (691), Expect = 2e-70
 Identities = 130/216 (60%), Positives = 161/216 (74%), Gaps = 4/216 (1%)
 Frame = +1

Query: 1   LSCWTDPEKINNIEHLRAMEDSLKESLNRIHSHKENFGKQQLMSLECTTQFQNGMHLPLG 180
           L CWTDPEKINN++HL AME S+KESLNRIH+HKEN GKQQLMSLEC  QFQNGM +PLG
Sbjct: 135 LRCWTDPEKINNVDHLNAMEQSIKESLNRIHTHKENLGKQQLMSLECA-QFQNGMQIPLG 193

Query: 181 MGGEQQAQSISWLPNNDSQHLMLTEDQSLLHQRDLECSTDASVPSYSGYFGTGKQAEIDG 360
           MGGEQQ QS+SW+PN+DSQHLML+ED SLL QRD+ECSTD S+ +YS Y G GKQ EID 
Sbjct: 194 MGGEQQPQSLSWIPNHDSQHLMLSEDTSLLPQRDIECSTDPSLQNYSSYLGMGKQVEIDN 253

Query: 361 SGQD--GSAMHDLNRNACLRLQLGGQYHYPPFGLNFLLDKNMKPDGKMNMQGPPLDYQIG 534
           SGQD  GS++ D + NACL LQ+GGQ+ Y P+  + + +   K D +M++Q P LDYQ+G
Sbjct: 254 SGQDGIGSSLPDFSANACLSLQIGGQFPYQPYDFDLVNNNKYKNDSEMSLQEPRLDYQVG 313

Query: 535 --TSFEAPRDGFDTNHHTWGSSSVPCANGIFDDHSY 636
              SF  PR  +D +   W S+S  C+  +FD   +
Sbjct: 314 NINSFGPPRHRYDASDQAWASTSGQCSVPMFDGQPF 349


>ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor 2A homolog [Vitis
           vinifera] gi|297733964|emb|CBI15211.3| unnamed protein
           product [Vitis vinifera]
          Length = 375

 Score =  268 bits (684), Expect = 1e-69
 Identities = 129/221 (58%), Positives = 166/221 (75%), Gaps = 7/221 (3%)
 Frame = +1

Query: 1   LSCWTDPEKINNIEHLRAMEDSLKESLNRIHSHKENFGKQQLMSLECTTQFQNGMHLPLG 180
           LS W++P+K+++ EHLR MEDSL+ESLNRI  HKENFGK QLMSLEC +QFQNGMHLPL 
Sbjct: 135 LSYWSNPDKVDSTEHLRQMEDSLRESLNRIRVHKENFGKHQLMSLECASQFQNGMHLPLI 194

Query: 181 MGGEQQAQSISWLPNNDSQHLMLTEDQSLLHQRDLECSTDASVPSYSGYFGTGKQAEI-- 354
           M G Q+AQ +SWLPNN++QHL+L E+ S L QRD+ECS DAS+P YSGY+ TGKQ EI  
Sbjct: 195 MDGVQEAQPLSWLPNNENQHLILPEEPSYLPQRDMECSADASIPGYSGYYSTGKQTEIGN 254

Query: 355 ----DGSGQDGSAMHDLNRNACLRLQLGGQYHYPPFG-LNFLLDKNMKPDGKMNMQGPPL 519
               D  GQ+GSA++ L+ N+ LRLQL  QY Y PFG LN   +K +KP+ +MN+QG P+
Sbjct: 255 SGQVDEQGQEGSALNQLSGNSNLRLQLSEQYLYSPFGNLNLPDEKKLKPEMEMNLQGNPV 314

Query: 520 DYQIGTSFEAPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQ 642
           DYQ+  +FE P   +D   HTW S+S PC+  +FD++S+ Q
Sbjct: 315 DYQVNGNFEIPAPIYDNRQHTWVSASGPCSIAMFDENSFSQ 355


>emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]
          Length = 465

 Score =  265 bits (678), Expect = 5e-69
 Identities = 127/220 (57%), Positives = 165/220 (75%), Gaps = 7/220 (3%)
 Frame = +1

Query: 4   SCWTDPEKINNIEHLRAMEDSLKESLNRIHSHKENFGKQQLMSLECTTQFQNGMHLPLGM 183
           S W++P+K+++ EHLR MEDSL+ESLNRI  HKENFGK QLMSLEC +QFQNGMHLPL M
Sbjct: 210 SYWSNPDKVDSTEHLRQMEDSLRESLNRIRVHKENFGKHQLMSLECASQFQNGMHLPLIM 269

Query: 184 GGEQQAQSISWLPNNDSQHLMLTEDQSLLHQRDLECSTDASVPSYSGYFGTGKQAEI--- 354
            G Q+AQ +SWLPNN++QHL+L E+ S L QRD+ECS DAS+P YSGY+ TGKQ EI   
Sbjct: 270 DGVQEAQPLSWLPNNENQHLILPEEPSYLPQRDMECSADASIPGYSGYYSTGKQTEIGNS 329

Query: 355 ---DGSGQDGSAMHDLNRNACLRLQLGGQYHYPPFG-LNFLLDKNMKPDGKMNMQGPPLD 522
              D  GQ+GSA++ L+ N+ LRLQL  QY Y PFG +N   +K +KP+ +MN+QG P+D
Sbjct: 330 GQVDEQGQEGSALNQLSGNSNLRLQLSEQYLYSPFGNMNLPDEKKLKPEMEMNLQGNPVD 389

Query: 523 YQIGTSFEAPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQ 642
           YQ+  +FE P   +D   HTW S+S PC+  +FD++S+ Q
Sbjct: 390 YQVNGNFEIPAPIYDNRQHTWVSASGPCSIAMFDENSFSQ 429


>emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160579|emb|CAY39418.1|
           MADS1 protein [Aristolochia fimbriata]
          Length = 349

 Score =  243 bits (620), Expect = 3e-62
 Identities = 114/215 (53%), Positives = 161/215 (74%)
 Frame = +1

Query: 1   LSCWTDPEKINNIEHLRAMEDSLKESLNRIHSHKENFGKQQLMSLECTTQFQNGMHLPLG 180
           LS +++PEKINN++ +R ME++L++S+NR+ +HK NF KQQLMSLEC  QFQNGMHLPL 
Sbjct: 137 LSYYSNPEKINNLDQIRLMEETLRDSINRVQTHKVNFEKQQLMSLECG-QFQNGMHLPLA 195

Query: 181 MGGEQQAQSISWLPNNDSQHLMLTEDQSLLHQRDLECSTDASVPSYSGYFGTGKQAEIDG 360
           MGGEQQAQ++SWL NND + +++TE+ +L+  RD+ECS+ A VPS+S YF  GK  E+D 
Sbjct: 196 MGGEQQAQTLSWLANNDGRAILMTENPNLVSHRDIECSSSAPVPSFSSYFNNGK-TEMDT 254

Query: 361 SGQDGSAMHDLNRNACLRLQLGGQYHYPPFGLNFLLDKNMKPDGKMNMQGPPLDYQIGTS 540
           SGQ+G  +++LN N CLRLQLGGQ+ Y P+ LN + +K  KP+G M +    +DY + + 
Sbjct: 255 SGQEGGTLNELNPNECLRLQLGGQFPYEPYNLNLIDEKKFKPEGDM-LHEQSVDYHV-SG 312

Query: 541 FEAPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQQ 645
           FE  R  +D NHH+W S+S  C   +F++H++QQQ
Sbjct: 313 FEQSRPEYDANHHSWASTSGHCGVPMFEEHTFQQQ 347


>ref|XP_002522456.1| mads box protein, putative [Ricinus communis]
           gi|223538341|gb|EEF39948.1| mads box protein, putative
           [Ricinus communis]
          Length = 360

 Score =  239 bits (611), Expect = 3e-61
 Identities = 115/217 (52%), Positives = 150/217 (69%), Gaps = 3/217 (1%)
 Frame = +1

Query: 1   LSCWTDPEKINNIEHLRAMEDSLKESLNRIHSHKENFGKQQLMSLECTTQFQNGMHLPLG 180
           LS WT P+KIN+I+HL  +E+SL+ESLN+I +HKE   KQQLMSLEC +QFQNGMHLP  
Sbjct: 134 LSYWTCPDKINSIDHLGQLENSLRESLNQIQAHKEYIEKQQLMSLECNSQFQNGMHLPFR 193

Query: 181 MGGEQQAQSISWLPNNDSQHLMLTEDQSLLHQRDLECSTDASVPSYSGYFGTGKQAEIDG 360
           MG EQQ   + W+PNNDSQ ++L ED +LL  RD+ECS  +S  SYSGYFGTGK +E+  
Sbjct: 194 MGAEQQLPPMQWIPNNDSQQIVLPEDPNLLPHRDVECSASSSFGSYSGYFGTGKSSELSN 253

Query: 361 SGQD---GSAMHDLNRNACLRLQLGGQYHYPPFGLNFLLDKNMKPDGKMNMQGPPLDYQI 531
           S Q+      +++LN  A LRLQL GQY + P+ LN L D   +P   MN+Q  P+D+ +
Sbjct: 254 SSQENGLNGILNELNGTASLRLQLAGQYPHLPYNLNMLNDTKFQPAADMNIQESPVDFHV 313

Query: 532 GTSFEAPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQ 642
             SFE P+ G+DT   +W SSS PCA  +FD+  Y +
Sbjct: 314 NGSFEVPKPGYDTTPGSWASSSGPCAVTMFDEQLYSR 350


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