BLASTX nr result

ID: Coptis24_contig00021199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021199
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic...   163   5e-38
ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic...   161   2e-37
ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic...   161   2e-37
ref|NP_001238570.1| uncharacterized protein LOC100305908 [Glycin...   161   2e-37
ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagell...   160   3e-37

>ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449515341|ref|XP_004164708.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 120

 Score =  163 bits (413), Expect = 5e-38
 Identities = 76/87 (87%), Positives = 83/87 (95%)
 Frame = -2

Query: 573 AKKVIIKSADMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNF 394
           +KK++IKSADM  DMQKEAID AI+AFEKHSVEK+IAEQIKK+FDK HGPTWHCIVGRNF
Sbjct: 34  SKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNF 93

Query: 393 GSYVTHETHHFVYFYLDQKAILLFKSG 313
           GSYVTHET+HFVYFYLDQKAILLFKSG
Sbjct: 94  GSYVTHETNHFVYFYLDQKAILLFKSG 120


>ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 122

 Score =  161 bits (408), Expect = 2e-37
 Identities = 73/86 (84%), Positives = 84/86 (97%)
 Frame = -2

Query: 570 KKVIIKSADMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFG 391
           KKVIIKSADM  DMQKEA+DIA++AFEK++VEK++AEQIKK+FDK+HGPTWHCIVGRNFG
Sbjct: 37  KKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG 96

Query: 390 SYVTHETHHFVYFYLDQKAILLFKSG 313
           SYVTHET+HFVYFYLDQKA+LLFKSG
Sbjct: 97  SYVTHETNHFVYFYLDQKAVLLFKSG 122


>ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 157

 Score =  161 bits (408), Expect = 2e-37
 Identities = 73/86 (84%), Positives = 84/86 (97%)
 Frame = -2

Query: 570 KKVIIKSADMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFG 391
           KKVIIKSADM  DMQKEA+DIA++AFEK++VEK++AEQIKK+FDK+HGPTWHCIVGRNFG
Sbjct: 72  KKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG 131

Query: 390 SYVTHETHHFVYFYLDQKAILLFKSG 313
           SYVTHET+HFVYFYLDQKA+LLFKSG
Sbjct: 132 SYVTHETNHFVYFYLDQKAVLLFKSG 157


>ref|NP_001238570.1| uncharacterized protein LOC100305908 [Glycine max]
           gi|255626947|gb|ACU13818.1| unknown [Glycine max]
          Length = 118

 Score =  161 bits (408), Expect = 2e-37
 Identities = 73/86 (84%), Positives = 84/86 (97%)
 Frame = -2

Query: 570 KKVIIKSADMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFG 391
           KKVIIKSADM  DMQKEA+DIA++AFEK++VEK++AEQIKK+FDK+HGPTWHCIVGRNFG
Sbjct: 33  KKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG 92

Query: 390 SYVTHETHHFVYFYLDQKAILLFKSG 313
           SYVTHET+HFVYFYLDQKA+LLFKSG
Sbjct: 93  SYVTHETNHFVYFYLDQKAVLLFKSG 118


>ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagellar outer arm [Vitis
           vinifera] gi|147857576|emb|CAN81003.1| hypothetical
           protein VITISV_006994 [Vitis vinifera]
          Length = 117

 Score =  160 bits (406), Expect = 3e-37
 Identities = 75/87 (86%), Positives = 82/87 (94%)
 Frame = -2

Query: 573 AKKVIIKSADMNEDMQKEAIDIAISAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNF 394
           +K+VIIKSADM +DMQKEAIDIAI+A E HSVEK IAE IKK+FDKKHGPTWHCIVGRNF
Sbjct: 31  SKRVIIKSADMKDDMQKEAIDIAIAASENHSVEKNIAEYIKKEFDKKHGPTWHCIVGRNF 90

Query: 393 GSYVTHETHHFVYFYLDQKAILLFKSG 313
           GSYVTHET+HFVYFYLDQKA+LLFKSG
Sbjct: 91  GSYVTHETNHFVYFYLDQKAVLLFKSG 117


Top