BLASTX nr result
ID: Coptis24_contig00021198
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021198 (1003 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244... 236 6e-60 emb|CBI18563.3| unnamed protein product [Vitis vinifera] 230 4e-58 ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g... 227 4e-57 ref|XP_002522340.1| zinc finger protein, putative [Ricinus commu... 214 3e-53 emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera] 203 5e-50 >ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera] Length = 332 Score = 236 bits (602), Expect = 6e-60 Identities = 131/265 (49%), Positives = 163/265 (61%), Gaps = 9/265 (3%) Frame = +1 Query: 1 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNXXXXXXXXXXXXXXXGKIK 180 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN GK K Sbjct: 76 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN-KNTSVSTAVGKSSAGKAK 134 Query: 181 T--PEFGKSNF--GFELEPPTNQVLWASPQNSQLMALLRAA--XXXXXXXXXSSVAIKEE 342 + E GKS GF+ E P+N +LWASPQNS L+ALLRA +SV +K++ Sbjct: 135 SAVSEIGKSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDD 194 Query: 343 GAMVGSYM-SDSALGTSALN-ARPTGVDHVSQVP-VGLYNSFWRXXXXXXXXXXXXXXXX 513 G M+GS+M S+S +GT A+N AR G+DH++Q+P +GL +S+WR Sbjct: 195 GVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYWR---NNQHQTQQHQQNS 251 Query: 514 XXXXXXSLLMGDVQNSGIQELFNRLRSSGNYYSNHSHPQFXXXXXXXXXXXXXXXXXXXI 693 ++G+VQN+GIQEL+ RLRSS NYY++HS I Sbjct: 252 HHQQQNGFILGEVQNTGIQELYQRLRSSTNYYTDHS----PVVLSNAVSSSSSILESAPI 307 Query: 694 TGGEVGYWNPTLSWANLPTANGAFP 768 GGE+GYWNPT SW++LPT NGA+P Sbjct: 308 AGGELGYWNPTFSWSDLPTTNGAYP 332 >emb|CBI18563.3| unnamed protein product [Vitis vinifera] Length = 425 Score = 230 bits (587), Expect = 4e-58 Identities = 131/281 (46%), Positives = 163/281 (58%), Gaps = 25/281 (8%) Frame = +1 Query: 1 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNXXXXXXXXXXXXXXXGKIK 180 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN GK K Sbjct: 149 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN-KNTSVSTAVGKSSAGKAK 207 Query: 181 T--PEFGKSNF--GFELEPPTNQVLWASPQNSQLMALLRAA--XXXXXXXXXSSVAIKEE 342 + E GKS GF+ E P+N +LWASPQNS L+ALLRA +SV +K++ Sbjct: 208 SAVSEIGKSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDD 267 Query: 343 GAMVGSYM-SDSALGTSALN-ARPTGVDHVSQVP-VGLYNSFWRXXXXXXXXXXXXXXXX 513 G M+GS+M S+S +GT A+N AR G+DH++Q+P +GL +S+WR Sbjct: 268 GVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYWR---NNQHQTQQHQQNS 324 Query: 514 XXXXXXSLLMGDVQNSGIQELFNRLRSSGNYYSNHS----------------HPQFXXXX 645 ++G+VQN+GIQEL+ RLRSS NYY++HS Sbjct: 325 HHQQQNGFILGEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNAVSSSSSILESAPIAGVL 384 Query: 646 XXXXXXXXXXXXXXXITGGEVGYWNPTLSWANLPTANGAFP 768 I GGE+GYWNPT SW++LPT NGA+P Sbjct: 385 SNAVSSSSSILESAPIAGGELGYWNPTFSWSDLPTTNGAYP 425 >ref|XP_002310753.1| f-box family protein [Populus trichocarpa] gi|118482074|gb|ABK92968.1| unknown [Populus trichocarpa] gi|222853656|gb|EEE91203.1| f-box family protein [Populus trichocarpa] Length = 323 Score = 227 bits (578), Expect = 4e-57 Identities = 123/263 (46%), Positives = 157/263 (59%), Gaps = 7/263 (2%) Frame = +1 Query: 1 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNXXXXXXXXXXXXXXXGKIK 180 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN K+K Sbjct: 77 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN-KNTSVSASVGKSGTNKMK 135 Query: 181 T--PEFGKSNF--GFELEPPTNQVLWASPQNSQLMALLRAAXXXXXXXXXSSVAIKEEGA 348 T + G+S F GFE E ++ ++WASPQNS ++ALLRA +S+ +KEEG Sbjct: 136 TMASDIGRSGFGNGFEHELSSSPIMWASPQNSHILALLRATQNPNPSTLSNSIFVKEEGG 195 Query: 349 MVGS-YMSDSALGTSALNARPTGVDHVSQVP-VGLYNSFWRXXXXXXXXXXXXXXXXXXX 522 ++G+ ++S+ +GT+ALNAR G+D +SQVP +GL + FW+ Sbjct: 196 LIGNQFISEPGVGTAALNARTLGLDPISQVPSLGLCSPFWK---------------SNQH 240 Query: 523 XXXSLLMGDVQNSGIQELFNRLRSSGNYYS-NHSHPQFXXXXXXXXXXXXXXXXXXXITG 699 +G+ QNSGIQEL+ RLRSS NYY+ N S + G Sbjct: 241 QQNGFTVGEAQNSGIQELYQRLRSSTNYYTDNPSAIVLSNVATSSSTSTSTILESAPVAG 300 Query: 700 GEVGYWNPTLSWANLPTANGAFP 768 GE+GYWNP SW++LPT NGA+P Sbjct: 301 GELGYWNPAFSWSDLPTTNGAYP 323 >ref|XP_002522340.1| zinc finger protein, putative [Ricinus communis] gi|223538418|gb|EEF40024.1| zinc finger protein, putative [Ricinus communis] Length = 335 Score = 214 bits (545), Expect = 3e-53 Identities = 123/266 (46%), Positives = 152/266 (57%), Gaps = 10/266 (3%) Frame = +1 Query: 1 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNXXXXXXXXXXXXXXXGKIK 180 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN K+K Sbjct: 81 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN-KNTVVSASVAKSSNNKMK 139 Query: 181 T--PEFGKSNFG--FELE-PPTNQVLWASPQNSQLMALLRA--AXXXXXXXXXSSVAIKE 339 T E G+S+FG F+ E P ++ ++WASP NS L+ LLRA +S+ +KE Sbjct: 140 TMVSEIGRSSFGNVFDHELPSSSPIMWASPHNSHLLTLLRANHNPNPNSTTLSNSLGVKE 199 Query: 340 E-GAMVGSYMSDSALG-TSALNARPTGVDHVSQVP-VGLYNSFWRXXXXXXXXXXXXXXX 510 E G M+G+ M G T ALNAR G+DH+SQVP +GL + FW+ Sbjct: 200 ETGCMIGTQMMAETTGATGALNARTLGMDHLSQVPSLGLCSPFWK----------NSQNQ 249 Query: 511 XXXXXXXSLLMGDVQNSGIQELFNRLRSSGNYYSNHSHPQFXXXXXXXXXXXXXXXXXXX 690 ++G+ QNSGIQEL+ RLRSS N Y + Sbjct: 250 AQHHQQNGFIVGEAQNSGIQELYQRLRSSTNTYYTDNSSVVLSNVGSSSTSSSNILESSP 309 Query: 691 ITGGEVGYWNPTLSWANLPTANGAFP 768 + GGE+GYWNPT SW++LPT NGA+P Sbjct: 310 VAGGELGYWNPTFSWSDLPTTNGAYP 335 >emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera] Length = 309 Score = 203 bits (517), Expect = 5e-50 Identities = 121/263 (46%), Positives = 145/263 (55%), Gaps = 7/263 (2%) Frame = +1 Query: 1 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNXXXXXXXXXXXXXXXGKIK 180 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKN GK K Sbjct: 76 FCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGKSSA-GKAK 134 Query: 181 TP--EFGKSNFG--FELEPPTNQVLWASPQNSQLMALLRAAXXXXXXXXX--SSVAIKEE 342 + E GKS G F+ E P+N +LWASPQNS L+ALLRA +SV +K++ Sbjct: 135 SAVSEIGKSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDD 194 Query: 343 GAMVGSYM-SDSALGTSALNARPTGVDHVSQVPVGLYNSFWRXXXXXXXXXXXXXXXXXX 519 G M+GS+M S+S +GT AL + S NS Sbjct: 195 GVMIGSHMTSESGVGT-ALTGETINIKLNSTNKTATINS--------------------- 232 Query: 520 XXXXSLLMGDVQNSGIQELFNRLRSSGNYYSNHSHPQFXXXXXXXXXXXXXXXXXXXITG 699 +L + QN+GIQEL+ RLRSS NYY++HS I G Sbjct: 233 --KMALYLVKFQNTGIQELYQRLRSSTNYYTDHS----PVVLSNAVSSSSSILESAPIAG 286 Query: 700 GEVGYWNPTLSWANLPTANGAFP 768 GE+GYWNPT SW++LPT NGA+P Sbjct: 287 GELGYWNPTFSWSDLPTTNGAYP 309