BLASTX nr result

ID: Coptis24_contig00021196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021196
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212...   166   2e-39
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   164   7e-39
ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]              152   3e-35
ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]              152   4e-35

>ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212447 [Cucumis sativus]
          Length = 4709

 Score =  166 bits (419), Expect = 2e-39
 Identities = 76/117 (64%), Positives = 93/117 (79%)
 Frame = -2

Query: 352 YYSLWPTGSFEEPWNLLVEQIYKSIGNTPVLYSDIDGGKWVSPTEAFFHDEHFAKSTELG 173
           Y+SLWP GSFEEPWN+LV+Q+YK I N  VLYS++DGGKWVSP EAF HD+ FA+STEL 
Sbjct: 442 YFSLWPNGSFEEPWNILVKQVYKIISNALVLYSNVDGGKWVSPNEAFLHDDKFARSTELS 501

Query: 172 EALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFLRECGTLTTSNRLCKL 2
           EAL LLG+PIVHLP +L+NM L +  +FQQ+V+ P TVR FLREC  + T NR  +L
Sbjct: 502 EALVLLGMPIVHLPETLSNMLLKFCSTFQQKVVTPCTVRHFLRECKHVFTLNRPYRL 558



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = -2

Query: 352  YYSLWPTGSFEEPWNLLVEQIYKSIGNTP--VLYSDIDGGKWVSPTEAFFHDEHFAKSTE 179
            + S WP  +  EPW  +V ++Y  IG+    VLY++  GG+W+S  +A F D  F K  E
Sbjct: 1855 FSSFWPAAAGVEPWGSVVRKLYSFIGDFGLLVLYTNARGGQWISAKQAIFPDFSFDKVHE 1914

Query: 178  LGEALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFL 47
            L EALS  GLP++ +  S+ + F+   PS     + P  +R+ L
Sbjct: 1915 LIEALSDSGLPVISISKSIVDRFMEVRPSL--HFLTPHLLRTLL 1956


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/117 (64%), Positives = 92/117 (78%)
 Frame = -2

Query: 352 YYSLWPTGSFEEPWNLLVEQIYKSIGNTPVLYSDIDGGKWVSPTEAFFHDEHFAKSTELG 173
           Y+SLWP GSFEEPWN+LV+Q+YK I N  VLYS++DGGKWVSP EAF HD+ FA+STEL 
Sbjct: 442 YFSLWPNGSFEEPWNILVKQVYKIISNALVLYSNVDGGKWVSPNEAFLHDDKFARSTELS 501

Query: 172 EALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFLRECGTLTTSNRLCKL 2
           EAL  LG+PIVHLP +L+NM L +  +FQQ+V+ P TVR FLREC  + T NR  +L
Sbjct: 502 EALCXLGMPIVHLPETLSNMLLKFCSTFQQKVVTPCTVRHFLRECKHVFTLNRPYRL 558



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = -2

Query: 352  YYSLWPTGSFEEPWNLLVEQIYKSIGNTP--VLYSDIDGGKWVSPTEAFFHDEHFAKSTE 179
            + S WP  +  EPW  +V ++Y  IG+    VLY++  GG+W+S  +A F D  F K  E
Sbjct: 1855 FSSFWPAAAGVEPWGSVVRKLYSFIGDFGLLVLYTNARGGQWISAKQAIFPDFSFDKVHE 1914

Query: 178  LGEALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFL 47
            L EALS  GLP++ +  S+ + F+   PS     + P  +R+ L
Sbjct: 1915 LIEALSDSGLPVISISKSIVDRFMEVRPSL--HFLTPHLLRTLL 1956


>ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|222856622|gb|EEE94169.1|
           predicted protein [Populus trichocarpa]
          Length = 2870

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/120 (62%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
 Frame = -2

Query: 352 YYSLWPTGSFEEPWNLLVEQIYKSIGNTPVLYSDIDGGKWVSPTEAFFHDEHFAKSTELG 173
           YYSLWPTG FEEPW++LVE IYK IG+ PVL SD++GG+WV+  EAF HDE F KS ELG
Sbjct: 451 YYSLWPTGPFEEPWSILVEHIYKRIGDAPVLRSDVEGGQWVTLVEAFLHDEEFPKSKELG 510

Query: 172 EALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFLREC---GTLTTSNRLCKL 2
           EAL  LG+P+VHLP  L NM L Y  +FQQ+V+ P TVR FLR+C   G+L  S RL  L
Sbjct: 511 EALLQLGMPVVHLPNVLFNMILKYASAFQQKVVTPDTVRDFLRQCKSVGSLNKSYRLVLL 570



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
 Frame = -2

Query: 355  LYYSLWPTGSFEEPWNLLVEQIYKSIGNTP--VLYSDIDGGKWVSPTEAFFHDEHFAKST 182
            L++S WP  +  EPW  +V ++Y  I  +   VL++    G+W+S  +A F D  F K  
Sbjct: 1860 LFFSFWPMETGVEPWASMVRKLYVFIAESGLRVLFTKAREGQWISAKQALFPDFTFHKVH 1919

Query: 181  ELGEALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFL 47
            EL EALS  GLP+V +   L   F+    S     +NP  + + L
Sbjct: 1920 ELVEALSDAGLPLVTVSQPLVEQFMEACSSL--NFLNPQFLMTLL 1962


>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4760

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/118 (61%), Positives = 87/118 (73%)
 Frame = -2

Query: 355 LYYSLWPTGSFEEPWNLLVEQIYKSIGNTPVLYSDIDGGKWVSPTEAFFHDEHFAKSTEL 176
           +YYSLWP GSFEEPWN LV+QIYK+IGN PV+YS+ +GG+WVSP+EAF HDE F KS +L
Sbjct: 438 IYYSLWPIGSFEEPWNTLVQQIYKNIGNAPVMYSNFNGGRWVSPSEAFLHDEKFTKSKDL 497

Query: 175 GEALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFLRECGTLTTSNRLCKL 2
           G AL  LG+P+VHLP SL +M L Y  S   +V+   TVR FLREC T    +R  KL
Sbjct: 498 GLALMQLGMPVVHLPNSLFDMLLQYSSS---KVVTSGTVRQFLRECETFNYLSRQYKL 552



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
 Frame = -2

Query: 355  LYYSLWPTGSFEEPWNLLVEQIYKSIG--NTPVLYSDIDGGKWVSPTEAFFHDEHFAKST 182
            L++SLWP     EPW   V ++Y+ +   N  VLY++  GG+W+S   A F D  F K+ 
Sbjct: 1848 LFFSLWPKSLGSEPWASAVRKLYQFVAEFNFRVLYTEARGGQWISTKHAIFPDFTFPKAA 1907

Query: 181  ELGEALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFL 47
            EL +ALS   LP++ LP SL   F+   PS     + P  +R+ L
Sbjct: 1908 ELIKALSGASLPVITLPQSLLERFMEICPSL--HFLTPKLLRTLL 1950


>ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4756

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/118 (60%), Positives = 87/118 (73%)
 Frame = -2

Query: 355 LYYSLWPTGSFEEPWNLLVEQIYKSIGNTPVLYSDIDGGKWVSPTEAFFHDEHFAKSTEL 176
           +YYSLWP GSFEEPWN+LV+QIYK+IGN PV+YS+ +GG+WVSP+EAF HDE F KS +L
Sbjct: 438 IYYSLWPIGSFEEPWNILVQQIYKNIGNAPVMYSNYNGGRWVSPSEAFLHDEKFTKSEDL 497

Query: 175 GEALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFLRECGTLTTSNRLCKL 2
           G AL  LG+P+VHLP SL +M L Y      +V+   TVR FLRECG     +R  KL
Sbjct: 498 GLALMQLGMPVVHLPNSLFDMLLQYSSC---KVVTSGTVRQFLRECGMFNYLSRQYKL 552



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = -2

Query: 355  LYYSLWPTGSFEEPWNLLVEQIYKSIG--NTPVLYSDIDGGKWVSPTEAFFHDEHFAKST 182
            L++SLWPT    EPW   V ++Y+ +   N  VLY++  GG+W+S   A F D  F K+ 
Sbjct: 1847 LFFSLWPTSLGLEPWASAVRKLYQFVAEFNLRVLYTEARGGQWISSKHAIFPDFTFPKAA 1906

Query: 181  ELGEALSLLGLPIVHLPTSLTNMFLNYDPSFQQRVINPATVRSFL 47
            EL +ALS   LP++ LP SL   F+   PS     + P  +R+ L
Sbjct: 1907 ELIKALSRASLPVITLPQSLLERFMEICPSL--HFLTPRLLRTLL 1949


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