BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021194
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574796.1| PREDICTED: signal recognition particle recep...    61   1e-07
dbj|BAJ85807.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   1e-07
ref|XP_002525397.1| Signal recognition particle receptor subunit...    61   1e-07
ref|XP_002300699.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|NP_001062284.1| Os08g0524000 [Oryza sativa Japonica Group] g...    60   2e-07

>ref|XP_003574796.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Brachypodium distachyon]
          Length = 256

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = -1

Query: 222 EEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIILAGLS 43
           +E V++      ++E+ IR+ P EQ+YVA                    KSNTI+L+GLS
Sbjct: 2   DEFVRQAEAWAGEAERWIRQQPPEQIYVAAAVVAVTILVLLAASCLKSSKSNTIVLSGLS 61

Query: 42  GSGKTLLFYQLRDG 1
           GSGKT+LFYQLRDG
Sbjct: 62  GSGKTILFYQLRDG 75


>dbj|BAJ85807.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 256

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = -1

Query: 222 EEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIILAGLS 43
           +E V++      Q+E+ IR+ P EQ+YVA                    KSNTI+L+GLS
Sbjct: 2   DEWVRQAEAWAGQAERWIRQQPPEQIYVAVAVIAVTILVLLAASCLKSSKSNTIVLSGLS 61

Query: 42  GSGKTLLFYQLRDG 1
           GSGKT+LFYQLRDG
Sbjct: 62  GSGKTILFYQLRDG 75


>ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative
           [Ricinus communis] gi|223535360|gb|EEF37035.1| Signal
           recognition particle receptor subunit beta, putative
           [Ricinus communis]
          Length = 259

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/78 (44%), Positives = 43/78 (55%)
 Frame = -1

Query: 234 MEGSEEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIIL 55
           MEG E+   + ++ LQQ  +   +IP  QLY A                    KSNTI+L
Sbjct: 1   MEGVEQWKNEAKQWLQQGIEFANQIPPAQLYAAAAVLLITTLFLLIIRFFRRTKSNTIVL 60

Query: 54  AGLSGSGKTLLFYQLRDG 1
            GLSGSGKT+LFYQLRDG
Sbjct: 61  TGLSGSGKTVLFYQLRDG 78


>ref|XP_002300699.1| predicted protein [Populus trichocarpa] gi|222842425|gb|EEE79972.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/78 (43%), Positives = 44/78 (56%)
 Frame = -1

Query: 234 MEGSEEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIIL 55
           MEG E+   + ++ LQQ  +   ++P  QLY A                    KSNTI+L
Sbjct: 1   MEGIEQWKTEAQQWLQQGIEYAHQLPPTQLYAAVAVLLFTTLLLLTIRLLKRTKSNTIVL 60

Query: 54  AGLSGSGKTLLFYQLRDG 1
           +GLSGSGKT+LFYQLRDG
Sbjct: 61  SGLSGSGKTVLFYQLRDG 78


>ref|NP_001062284.1| Os08g0524000 [Oryza sativa Japonica Group]
           gi|42407742|dbj|BAD08889.1| putative signal recognition
           particle receptor beta subunit (SR-beta) [Oryza sativa
           Japonica Group] gi|113624253|dbj|BAF24198.1|
           Os08g0524000 [Oryza sativa Japonica Group]
           gi|125562248|gb|EAZ07696.1| hypothetical protein
           OsI_29953 [Oryza sativa Indica Group]
           gi|125604064|gb|EAZ43389.1| hypothetical protein
           OsJ_27995 [Oryza sativa Japonica Group]
           gi|215695108|dbj|BAG90299.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 256

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = -1

Query: 222 EEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIILAGLS 43
           +E V++    + Q+E+ IR+ P EQ+YVA                    K+NTI+L+GLS
Sbjct: 2   DEWVRQAEVWVGQAERWIRQQPPEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGLS 61

Query: 42  GSGKTLLFYQLRDG 1
           GSGKT+LFYQLRDG
Sbjct: 62  GSGKTILFYQLRDG 75