BLASTX nr result
ID: Coptis24_contig00021194
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021194 (390 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003574796.1| PREDICTED: signal recognition particle recep... 61 1e-07 dbj|BAJ85807.1| predicted protein [Hordeum vulgare subsp. vulgare] 61 1e-07 ref|XP_002525397.1| Signal recognition particle receptor subunit... 61 1e-07 ref|XP_002300699.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|NP_001062284.1| Os08g0524000 [Oryza sativa Japonica Group] g... 60 2e-07 >ref|XP_003574796.1| PREDICTED: signal recognition particle receptor subunit beta-like [Brachypodium distachyon] Length = 256 Score = 60.8 bits (146), Expect = 1e-07 Identities = 33/74 (44%), Positives = 44/74 (59%) Frame = -1 Query: 222 EEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIILAGLS 43 +E V++ ++E+ IR+ P EQ+YVA KSNTI+L+GLS Sbjct: 2 DEFVRQAEAWAGEAERWIRQQPPEQIYVAAAVVAVTILVLLAASCLKSSKSNTIVLSGLS 61 Query: 42 GSGKTLLFYQLRDG 1 GSGKT+LFYQLRDG Sbjct: 62 GSGKTILFYQLRDG 75 >dbj|BAJ85807.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 256 Score = 60.8 bits (146), Expect = 1e-07 Identities = 34/74 (45%), Positives = 44/74 (59%) Frame = -1 Query: 222 EEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIILAGLS 43 +E V++ Q+E+ IR+ P EQ+YVA KSNTI+L+GLS Sbjct: 2 DEWVRQAEAWAGQAERWIRQQPPEQIYVAVAVIAVTILVLLAASCLKSSKSNTIVLSGLS 61 Query: 42 GSGKTLLFYQLRDG 1 GSGKT+LFYQLRDG Sbjct: 62 GSGKTILFYQLRDG 75 >ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative [Ricinus communis] gi|223535360|gb|EEF37035.1| Signal recognition particle receptor subunit beta, putative [Ricinus communis] Length = 259 Score = 60.8 bits (146), Expect = 1e-07 Identities = 35/78 (44%), Positives = 43/78 (55%) Frame = -1 Query: 234 MEGSEEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIIL 55 MEG E+ + ++ LQQ + +IP QLY A KSNTI+L Sbjct: 1 MEGVEQWKNEAKQWLQQGIEFANQIPPAQLYAAAAVLLITTLFLLIIRFFRRTKSNTIVL 60 Query: 54 AGLSGSGKTLLFYQLRDG 1 GLSGSGKT+LFYQLRDG Sbjct: 61 TGLSGSGKTVLFYQLRDG 78 >ref|XP_002300699.1| predicted protein [Populus trichocarpa] gi|222842425|gb|EEE79972.1| predicted protein [Populus trichocarpa] Length = 258 Score = 60.1 bits (144), Expect = 2e-07 Identities = 34/78 (43%), Positives = 44/78 (56%) Frame = -1 Query: 234 MEGSEEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIIL 55 MEG E+ + ++ LQQ + ++P QLY A KSNTI+L Sbjct: 1 MEGIEQWKTEAQQWLQQGIEYAHQLPPTQLYAAVAVLLFTTLLLLTIRLLKRTKSNTIVL 60 Query: 54 AGLSGSGKTLLFYQLRDG 1 +GLSGSGKT+LFYQLRDG Sbjct: 61 SGLSGSGKTVLFYQLRDG 78 >ref|NP_001062284.1| Os08g0524000 [Oryza sativa Japonica Group] gi|42407742|dbj|BAD08889.1| putative signal recognition particle receptor beta subunit (SR-beta) [Oryza sativa Japonica Group] gi|113624253|dbj|BAF24198.1| Os08g0524000 [Oryza sativa Japonica Group] gi|125562248|gb|EAZ07696.1| hypothetical protein OsI_29953 [Oryza sativa Indica Group] gi|125604064|gb|EAZ43389.1| hypothetical protein OsJ_27995 [Oryza sativa Japonica Group] gi|215695108|dbj|BAG90299.1| unnamed protein product [Oryza sativa Japonica Group] Length = 256 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/74 (44%), Positives = 45/74 (60%) Frame = -1 Query: 222 EEIVKKLRELLQQSEKRIREIPQEQLYVAXXXXXXXXXXXXXXXXXXXXKSNTIILAGLS 43 +E V++ + Q+E+ IR+ P EQ+YVA K+NTI+L+GLS Sbjct: 2 DEWVRQAEVWVGQAERWIRQQPPEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGLS 61 Query: 42 GSGKTLLFYQLRDG 1 GSGKT+LFYQLRDG Sbjct: 62 GSGKTILFYQLRDG 75