BLASTX nr result

ID: Coptis24_contig00021192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021192
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267...   213   3e-53
ref|XP_002512224.1| conserved hypothetical protein [Ricinus comm...   185   1e-44
gb|AFK34560.1| unknown [Medicago truncatula]                          182   5e-44
ref|NP_001238033.1| uncharacterized protein LOC100500690 precurs...   179   5e-43
ref|XP_002319067.1| predicted protein [Populus trichocarpa] gi|2...   178   9e-43

>ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267439 [Vitis vinifera]
           gi|298204883|emb|CBI34190.3| unnamed protein product
           [Vitis vinifera]
          Length = 206

 Score =  213 bits (542), Expect = 3e-53
 Identities = 94/178 (52%), Positives = 129/178 (72%), Gaps = 3/178 (1%)
 Frame = +2

Query: 8   MAFSYLIVFVALLHILKPITAT---YNSSIDSYLANLCREVECGKGTCKASLDYTFNFIC 178
           MA + L+  +ALL +L P++A    ++ ++  +L NLC EVECGKGTCKASL+Y FNFIC
Sbjct: 1   MASTNLMASMALLLLLLPLSAMGDDWSPALSPFLDNLCDEVECGKGTCKASLEYKFNFIC 60

Query: 179 ECDSGWTQVSKGEADDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWT 358
           ECDSGW + ++G+ +DG  +LPC+ PNCT++YSC  AP+P P V   P N+S +DPCYW 
Sbjct: 61  ECDSGWKR-TRGDNEDGLKYLPCVIPNCTLDYSCMTAPSPAPAV---PHNESAFDPCYWM 116

Query: 359 YCGDGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPSS 532
           YCG+G C+ +S +GYKC+C  GY NL+N + +PC+ EC +GSDC  LG+ V  S  SS
Sbjct: 117 YCGEGKCTRSSAYGYKCECNSGYQNLLNISVYPCYSECALGSDCEKLGIKVSNSTSSS 174


>ref|XP_002512224.1| conserved hypothetical protein [Ricinus communis]
           gi|223548185|gb|EEF49676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  185 bits (469), Expect = 1e-44
 Identities = 82/193 (42%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
 Frame = +2

Query: 8   MAFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECD 187
           MA      F+AL  +L P  A  ++     L  +C EVECGKGTCK  +     ++CEC+
Sbjct: 1   MAIVKKFCFLALFLVLLPTIALGDNRSTPILDAICNEVECGKGTCKGDILKPLGYVCECE 60

Query: 188 SGWTQVSKGEADDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWTYCG 367
           SGW +    + +D   FLPC+YP CT+NY   +   PTP  +  P N SFYDPCYW +CG
Sbjct: 61  SGWARSPDADVNDTLQFLPCVYPKCTLNYDGCQPAPPTPPEKTVPLNSSFYDPCYWMFCG 120

Query: 368 DGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPS-SVNNA 544
           +G+C+  S + + C CK G++NL++   FPC+  C IGSDC  LG+ V  S  S   N A
Sbjct: 121 EGTCTKNSTYNHLCTCKSGFSNLLDVPYFPCYSPCTIGSDCASLGIKVSNSESSPGTNPA 180

Query: 545 YSIIPRSFPWAMV 583
            SI+P  F W ++
Sbjct: 181 SSILPGKFRWMII 193


>gb|AFK34560.1| unknown [Medicago truncatula]
          Length = 203

 Score =  182 bits (463), Expect = 5e-44
 Identities = 84/193 (43%), Positives = 114/193 (59%), Gaps = 2/193 (1%)
 Frame = +2

Query: 11  AFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECDS 190
           +F  L +   +L +L P+ A      D  L  +C EVECGKG C  +  Y  NF+CECDS
Sbjct: 3   SFKLLSLIAVVLMLLLPMAAK-GDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECDS 61

Query: 191 GWTQVSKGEADDGH--SFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWTYC 364
           GW + ++ E DD +  SFLPC+ P C++NY C  AP P P  +  P N S +DPCYW YC
Sbjct: 62  GWKR-TQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPE-KTLPRNISAFDPCYWAYC 119

Query: 365 GDGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPSSVNNA 544
           G+G C+    H ++C+C   Y NL+N + FPC+ EC +GSDC+ LG+ VP S     ++A
Sbjct: 120 GEGQCTKNKTHTHRCECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVPNSTGDVDSHA 179

Query: 545 YSIIPRSFPWAMV 583
            SI    F W  V
Sbjct: 180 SSIFGGRFHWITV 192


>ref|NP_001238033.1| uncharacterized protein LOC100500690 precursor [Glycine max]
           gi|255630943|gb|ACU15834.1| unknown [Glycine max]
          Length = 204

 Score =  179 bits (454), Expect = 5e-43
 Identities = 79/194 (40%), Positives = 115/194 (59%), Gaps = 2/194 (1%)
 Frame = +2

Query: 8   MAFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECD 187
           M  S L+  +A+L I+    A    +I  +   +C EVECGKG+C  +  Y  NF+CECD
Sbjct: 1   MGSSKLLGIMAMLFIVLLPMAAKGDNITDFFDKVCEEVECGKGSCVVNTSYPLNFVCECD 60

Query: 188 SGWTQVSKGEADDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWTYCG 367
           SGW +    + +   SFLPC+ P C++NY C  AP P P  +  P N S +DPCYW YCG
Sbjct: 61  SGWKRTQDDDDEYATSFLPCVIPECSLNYGCQPAPPPVPE-KSFPHNFSAFDPCYWAYCG 119

Query: 368 DGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSI--PSSVNN 541
           +G+C+    H ++C+C+  Y NL+N + FPC+ EC +GSDC+ LG+ V  S     S ++
Sbjct: 120 EGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSSTDSGSQDS 179

Query: 542 AYSIIPRSFPWAMV 583
           + SI    F W ++
Sbjct: 180 SASIFTGRFHWMVM 193


>ref|XP_002319067.1| predicted protein [Populus trichocarpa] gi|222857443|gb|EEE94990.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  178 bits (452), Expect = 9e-43
 Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 10/210 (4%)
 Frame = +2

Query: 8   MAFSYLIVFVALLHILKPITAT--YNSSIDSYLANLCREVECGKGTCKASLDYTFNFICE 181
           MAFS  + FV +L ++ P+ A    + ++ ++   LC+EV+CGKGTC     Y  ++ CE
Sbjct: 1   MAFSKALPFVTMLLVVLPMVAMADIDGNLTAFYDRLCKEVDCGKGTCVGDKSYPLSYKCE 60

Query: 182 CDSGW--TQVSKGEADDGHSFLPCIYPNCTMNY-SCGEAPAPTPNVEEPPTNKSFYDPCY 352
           C +GW  TQ    + DD H FLPC+ PNCT+ Y +C  AP P P  +E P N SF+DPCY
Sbjct: 61  CQAGWKQTQYDDDDVDDEHKFLPCVIPNCTLKYGTCQPAPPPVPQ-KEAPHNSSFFDPCY 119

Query: 353 WTYCGDGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGL-----GVTVPV 517
           W YCG+G C+    + + C C  G+ NL+N + +PC+G C +GSDC  +       +   
Sbjct: 120 WMYCGEGQCTNNGTYRHTCTCNPGFVNLLNISYYPCYGACTLGSDCADIIRIANSTSTGS 179

Query: 518 SIPSSVNNAYSIIPRSFPWAMVFTFLLAIA 607
              +  N A +I+P  F W ++    + +A
Sbjct: 180 GTGTGGNPASTILPAKFQWMIILLVSMLMA 209


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