BLASTX nr result

ID: Coptis24_contig00021186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021186
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago ...   103   7e-30
ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago ...   103   5e-25

>ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago truncatula]
           gi|355477334|gb|AES58537.1| hypothetical protein
           MTR_1g005270 [Medicago truncatula]
          Length = 126

 Score =  103 bits (258), Expect(3) = 7e-30
 Identities = 52/62 (83%), Positives = 52/62 (83%)
 Frame = +3

Query: 120 PSLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVTHTFCSGLGP 299
           P LDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVT       G 
Sbjct: 54  PYLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVTQPTKKSKGL 113

Query: 300 VP 305
            P
Sbjct: 114 TP 115



 Score = 39.7 bits (91), Expect(3) = 7e-30
 Identities = 21/30 (70%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
 Frame = +2

Query: 47  IGP--AARLYSSIPAATHGPMGTISAPLSR 130
           IGP  AARLYSSIPAATH P+GTI   L +
Sbjct: 29  IGPVQAARLYSSIPAATHDPIGTICPYLDK 58



 Score = 32.3 bits (72), Expect(3) = 7e-30
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +1

Query: 1  RPLSYSPLPPIKRIG 45
          RPLSYS LPPIKRIG
Sbjct: 16 RPLSYSALPPIKRIG 30


>ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago truncatula]
           gi|355480609|gb|AES61812.1| hypothetical protein
           MTR_1g088810 [Medicago truncatula]
          Length = 444

 Score =  103 bits (256), Expect(2) = 5e-25
 Identities = 50/51 (98%), Positives = 50/51 (98%)
 Frame = +3

Query: 120 PSLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVT 272
           P LDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVT
Sbjct: 91  PYLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVT 141



 Score = 36.2 bits (82), Expect(2) = 5e-25
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +1

Query: 46  NRSRGPPLFIYTSCHARPNG 105
           +RS GPPLFIYTSCH  P G
Sbjct: 68  SRSSGPPLFIYTSCHHDPIG 87


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