BLASTX nr result

ID: Coptis24_contig00021184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021184
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...    69   1e-09
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...    67   5e-09
emb|CBI15155.3| unnamed protein product [Vitis vinifera]               67   5e-09
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...    65   2e-08
ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...    65   3e-08

>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = +3

Query: 111  GECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNGSK 260
            GEC ++N+RTLCVACH +VTAAQ AERR+ + NA+K+LK ++  + NG K
Sbjct: 1112 GECKLENLRTLCVACHYDVTAAQCAERRIAKANARKQLKALMNSMKNGIK 1161


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +3

Query: 111  GECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNGSKIE 266
            GEC ++NMRTLCV CH +VTAAQ AERR  RI AKK+LK I+  L + +K++
Sbjct: 1163 GECRLENMRTLCVGCHSDVTAAQCAERRSVRIKAKKQLKVIMNSLKDDAKMK 1214


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +3

Query: 111  GECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNGSKIE 266
            GEC ++NMRTLCV CH +VTAAQ AERR  RI AKK+LK I+  L + +K++
Sbjct: 1084 GECRLENMRTLCVGCHSDVTAAQCAERRSVRIKAKKQLKVIMNSLKDDAKMK 1135


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = +3

Query: 111  GECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNGSKIETVNSS 281
            GEC ++NMRTLCVACH +VTAAQ AERR T   A+ +LK I+  L +  K+E+ +SS
Sbjct: 1129 GECRLENMRTLCVACHYDVTAAQRAERRATWAKARAQLKIIMNNLKSDQKMESDSSS 1185


>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
            endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1241

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = +3

Query: 111  GECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNGSKIETVNSSL 284
            GEC ++NMRTLCVACH +VTA Q AERR+ R+ AKK+LK  +  +  G     +++ +
Sbjct: 1136 GECRLENMRTLCVACHFDVTAEQRAERRLVRLKAKKQLKDAIIDIKKGGNTGRIDTDI 1193


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