BLASTX nr result

ID: Coptis24_contig00021183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021183
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274273.1| PREDICTED: uncharacterized protein LOC100248...   239   1e-60
ref|XP_002510547.1| conserved hypothetical protein [Ricinus comm...   232   2e-58
ref|XP_002467739.1| hypothetical protein SORBIDRAFT_01g033230 [S...   229   2e-57
ref|XP_002306937.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-57
ref|NP_001149043.1| LOC100282663 [Zea mays] gi|195624240|gb|ACG3...   228   4e-57

>ref|XP_002274273.1| PREDICTED: uncharacterized protein LOC100248885 [Vitis vinifera]
            gi|302142678|emb|CBI19881.3| unnamed protein product
            [Vitis vinifera]
          Length = 295

 Score =  239 bits (610), Expect = 1e-60
 Identities = 146/293 (49%), Positives = 180/293 (61%), Gaps = 16/293 (5%)
 Frame = -1

Query: 1326 QVIRPLFSLRTNFHYRLLTPI--SSIRXXXXXXXXXXKHLPYSTPPTSLD----FQSRGL 1165
            Q+IRPL       ++ + TP    S+            HL   T P SL     F+S GL
Sbjct: 4    QLIRPLRQWPRLQYHCIFTPTLHHSLSSPSLFSTKAISHLLSFTKPPSLHSNRHFRSYGL 63

Query: 1164 RTVEMPSPSDIQEXXXXXXXXXXXXSRNQKKREARQTVKWGMELAEFSVPQIKRIVSVAS 985
            R    P+PS +QE             RN++KREAR+ V+WGMELA FS PQIKRI+ +AS
Sbjct: 64   RLPNDPAPSHLQETAGEQDSDAKRS-RNERKREARRAVRWGMELAAFSTPQIKRILRMAS 122

Query: 984  LGQEVYNAIMLVKKFGPDVREGKRRQFNYIGRLLREAQPELLDALIQATKDGDQSKLQEL 805
            L +EV++A+MLVK+ GPDVREGKRRQFNYIGRLLR  QPEL+DALIQA+KDGDQS+LQ L
Sbjct: 123  LEREVFDALMLVKRLGPDVREGKRRQFNYIGRLLRGVQPELMDALIQASKDGDQSRLQAL 182

Query: 804  SDAGASIV----XXXXXXXXXXXXXXXXXGNHISVASRWFDGLIDKDSDITKEVYSIHSV 637
            S     +V                       +I +A+RW DGLI+KD D+T EVYS+ SV
Sbjct: 183  SGLDTRVVEEDGEEDEANEEDYEEEDEESNTYIDIATRWSDGLINKDIDVTNEVYSVQSV 242

Query: 636  EFDRQELRKLVRRVRSIQ------TEESESALNRAKKPLIRFLQSLAKQMEDE 496
            EFDRQELRKLVR+V SIQ       EE + AL  AKK L +FL +LAKQ+  E
Sbjct: 243  EFDRQELRKLVRKVHSIQGHQAIIKEEEDVALLGAKKSLFQFLYTLAKQLPTE 295


>ref|XP_002510547.1| conserved hypothetical protein [Ricinus communis]
            gi|223551248|gb|EEF52734.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 304

 Score =  232 bits (591), Expect = 2e-58
 Identities = 131/257 (50%), Positives = 174/257 (67%), Gaps = 17/257 (6%)
 Frame = -1

Query: 1215 LPYSTPPTS---LDFQSRGLRTVEMPSPSDIQEXXXXXXXXXXXXS---RNQKKREARQT 1054
            L ++TP +S   + F+SRGLR  +  +PSD +E                RNQKKREAR+ 
Sbjct: 46   LVFNTPRSSNRSVHFRSRGLRLPDATTPSDRKEGGSNSNSDSDSDEKRSRNQKKREARRA 105

Query: 1053 VKWGMELAEFSVPQIKRIVSVASLGQEVYNAIMLVKKFGPDVREGKRRQFNYIGRLLREA 874
            V+WGMELA FS PQIKRI+ +ASL +EVY+A++LVK+ GPDVREGKRRQFNYIG+LLRE 
Sbjct: 106  VRWGMELASFSGPQIKRILRMASLEREVYDALILVKRLGPDVREGKRRQFNYIGKLLREV 165

Query: 873  QPELLDALIQATKDGDQSKLQELSDAGASIVXXXXXXXXXXXXXXXXXGN--HISVASRW 700
            +PEL+DALI +TKDGD S++Q +SD   +I+                 G+  +  +A+RW
Sbjct: 166  KPELMDALIHSTKDGDWSRVQAVSDLETAIIEEADEDSEETDYDEEEEGSCEYADLATRW 225

Query: 699  FDGLIDKDSDITKEVYSIHSVEFDRQELRKLVRRVRSIQ---------TEESESALNRAK 547
             DGLI+KD  IT EVY+I S++FDRQELRKLVRRV ++Q          +E+++A+  A 
Sbjct: 226  LDGLINKDIQITNEVYAISSIDFDRQELRKLVRRVHAVQEGKNVIEENKQEADTAVMAAT 285

Query: 546  KPLIRFLQSLAKQMEDE 496
            KPL+RFL +LAKQM  E
Sbjct: 286  KPLLRFLHALAKQMPTE 302


>ref|XP_002467739.1| hypothetical protein SORBIDRAFT_01g033230 [Sorghum bicolor]
            gi|241921593|gb|EER94737.1| hypothetical protein
            SORBIDRAFT_01g033230 [Sorghum bicolor]
          Length = 273

 Score =  229 bits (583), Expect = 2e-57
 Identities = 130/244 (53%), Positives = 157/244 (64%), Gaps = 11/244 (4%)
 Frame = -1

Query: 1206 STPPTSLDFQSRGLRTVEMPSPSDIQEXXXXXXXXXXXXS----RNQKKREARQTVKWGM 1039
            + P   L    R LR    P PSD ++            S    RN+ KREAR+ VKWGM
Sbjct: 28   AAPLPGLRRHPRALRPAGRPLPSDAEDDTDDPDAGAGAESFKKSRNELKREARRAVKWGM 87

Query: 1038 ELAEFSVPQIKRIVSVASLGQEVYNAIMLVKKFGPDVREGKRRQFNYIGRLLREAQPELL 859
            +LA FS PQIKRI+S ASL +EV++A+MLVKKFGPDVREGKRRQFNYIGRLLR AQPEL+
Sbjct: 88   DLASFSPPQIKRILSAASLEREVFDALMLVKKFGPDVREGKRRQFNYIGRLLRNAQPELM 147

Query: 858  DALIQATKDGDQSKLQELSDAGASIVXXXXXXXXXXXXXXXXXGNHISVASRWFDGLIDK 679
            D LIQA+KDGD+SKL  L   G  +V                   +I +A RWFDGL+ K
Sbjct: 148  DTLIQASKDGDESKLHALLSEGTLLV--EEEEVEDLPDEQEDNQEYIKIADRWFDGLLCK 205

Query: 678  DSDITKEVYSIHSVEFDRQELRKLVRRVRSIQT-------EESESALNRAKKPLIRFLQS 520
            D  +T EVYS+HSVEFDRQELRKLV+R   +Q        E+S   L+ AKK L+RFL+S
Sbjct: 206  DISVTNEVYSVHSVEFDRQELRKLVKRAHMVQESTHNKDGEDSNVKLSGAKKTLMRFLRS 265

Query: 519  LAKQ 508
            LAK+
Sbjct: 266  LAKE 269


>ref|XP_002306937.1| predicted protein [Populus trichocarpa] gi|222856386|gb|EEE93933.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  228 bits (581), Expect = 3e-57
 Identities = 130/249 (52%), Positives = 164/249 (65%), Gaps = 12/249 (4%)
 Frame = -1

Query: 1191 SLDFQSRGLRTVEMPSPSDIQEXXXXXXXXXXXXS-RNQKKREARQTVKWGMELAEFSVP 1015
            S+ F+ RG +    P+P D ++              RNQKKREAR++V+WGMELA FS P
Sbjct: 51   SVPFRPRGPKLPNSPTPYDFEQGGNVSDSDSEANKSRNQKKREARRSVRWGMELASFSPP 110

Query: 1014 QIKRIVSVASLGQEVYNAIMLVKKFGPDVREGKRRQFNYIGRLLREAQPELLDALIQATK 835
            QIKRI+ VASL ++V++A+MLVK+ GPDVREGKRRQ+NYIG+LLRE +PEL+DALI  TK
Sbjct: 111  QIKRIIKVASLEKDVFDALMLVKRLGPDVREGKRRQYNYIGKLLREMEPELMDALIHCTK 170

Query: 834  DGDQSKLQELSDAGASIVXXXXXXXXXXXXXXXXXGNH--ISVASRWFDGLIDKDSDITK 661
            DGD S+LQ  S     I                  G+H  I VA+RWFDGLI++D  +T 
Sbjct: 171  DGDWSRLQGFSGLEEKIAGEENEECEEREYESEEEGSHEYIDVATRWFDGLINRDIKVTN 230

Query: 660  EVYSIHSVEFDRQELRKLVRRVRSIQ-----TEESE----SALNRAKKPLIRFLQSLAKQ 508
            EVYS+ +V+FDRQELRKLVRRV ++Q     TEE+E    +A+  AKK L RFL  LAKQ
Sbjct: 231  EVYSLRNVDFDRQELRKLVRRVHAVQERKGVTEENEQEVDAAITVAKKSLTRFLHDLAKQ 290

Query: 507  MEDE*ELIY 481
            M  E   IY
Sbjct: 291  MPREHNRIY 299


>ref|NP_001149043.1| LOC100282663 [Zea mays] gi|195624240|gb|ACG33950.1| kinesin heavy
            chain isolog [Zea mays] gi|414587790|tpg|DAA38361.1| TPA:
            kinesin heavy chain isolog [Zea mays]
          Length = 274

 Score =  228 bits (580), Expect = 4e-57
 Identities = 118/200 (59%), Positives = 145/200 (72%), Gaps = 7/200 (3%)
 Frame = -1

Query: 1086 RNQKKREARQTVKWGMELAEFSVPQIKRIVSVASLGQEVYNAIMLVKKFGPDVREGKRRQ 907
            RN+ KREAR+ VKWGM+LA+FS PQIKRI+S ASL +EV++A+MLVKKFGPDVREG+RRQ
Sbjct: 71   RNELKREARRAVKWGMDLAKFSPPQIKRILSAASLEREVFDALMLVKKFGPDVREGRRRQ 130

Query: 906  FNYIGRLLREAQPELLDALIQATKDGDQSKLQELSDAGASIVXXXXXXXXXXXXXXXXXG 727
            FNYIG LLR+AQPEL+D LIQA+KDGD+ KL  L   G  +V                  
Sbjct: 131  FNYIGSLLRDAQPELMDTLIQASKDGDERKLYTLLSEGKLLVEEEEEEEEDLPDGEEENQ 190

Query: 726  NHISVASRWFDGLIDKDSDITKEVYSIHSVEFDRQELRKLVRRVRSIQT-------EESE 568
             ++ +A RWFDGL+ KD  +T EVYS+HSVEFDRQELRKLV+R    Q        EES 
Sbjct: 191  EYMKIADRWFDGLLCKDISVTNEVYSVHSVEFDRQELRKLVKRAHMFQESTQNKDGEESN 250

Query: 567  SALNRAKKPLIRFLQSLAKQ 508
            + L+ AKKPL+RFL+SLAK+
Sbjct: 251  AKLSGAKKPLMRFLRSLAKE 270


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