BLASTX nr result

ID: Coptis24_contig00021174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021174
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-73
ref|XP_002299032.1| predicted protein [Populus trichocarpa] gi|2...   269   2e-70
ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80...   268   3e-70
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              268   3e-70
ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-69

>ref|XP_002328587.1| predicted protein [Populus trichocarpa] gi|222838569|gb|EEE76934.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  278 bits (711), Expect = 3e-73
 Identities = 133/159 (83%), Positives = 145/159 (91%)
 Frame = -3

Query: 479 SCKRNKSNPCREAPTALTIQSSSAVSVNGLNIQNSQQMHFVISNSDSVRVLNVKISAPES 300
           SCK+NKSNPCR APTALTI SSSAV +NGL IQNSQQMHFVIS+SDSVRV +V +SAPE 
Sbjct: 174 SCKKNKSNPCRGAPTALTIDSSSAVKINGLTIQNSQQMHFVISHSDSVRVSDVLVSAPED 233

Query: 299 SPNTDGIHITKSTNVVIQDCKIGTGDDCISIVNGSSGIKMKNIYCGPGHGISIGSLGKDN 120
           SPNTDGIHIT STNVV+QDCKIGTGDDC+SIVNGSS IKMK I+CGPGHGISIGSLGKDN
Sbjct: 234 SPNTDGIHITGSTNVVLQDCKIGTGDDCVSIVNGSSNIKMKRIFCGPGHGISIGSLGKDN 293

Query: 119 STGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAVRF 3
           STG+VTK+VLD A+ +ETTNGLRIKTWQGG GYVR VRF
Sbjct: 294 STGMVTKVVLDTAFLRETTNGLRIKTWQGGHGYVRGVRF 332


>ref|XP_002299032.1| predicted protein [Populus trichocarpa] gi|222846290|gb|EEE83837.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  269 bits (688), Expect = 2e-70
 Identities = 128/159 (80%), Positives = 141/159 (88%)
 Frame = -3

Query: 479 SCKRNKSNPCREAPTALTIQSSSAVSVNGLNIQNSQQMHFVISNSDSVRVLNVKISAPES 300
           SCK+NK+NPCR APTALTI SSS+V V GL I+NSQQMHFVIS S SVR+  V +SAP  
Sbjct: 173 SCKKNKTNPCRGAPTALTIDSSSSVKVKGLTIKNSQQMHFVISKSASVRISQVSVSAPGD 232

Query: 299 SPNTDGIHITKSTNVVIQDCKIGTGDDCISIVNGSSGIKMKNIYCGPGHGISIGSLGKDN 120
           SPNTDGIHIT+STNVV+QDCKIGTGDDCISIVNGSSGIKMK IYCGPGHG+SIGSLGKDN
Sbjct: 233 SPNTDGIHITQSTNVVLQDCKIGTGDDCISIVNGSSGIKMKRIYCGPGHGVSIGSLGKDN 292

Query: 119 STGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAVRF 3
           STGIV K+VLD A+  ETTNG+RIKTWQGG+GYVR VRF
Sbjct: 293 STGIVAKVVLDTAFISETTNGVRIKTWQGGNGYVRGVRF 331


>ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 462

 Score =  268 bits (686), Expect = 3e-70
 Identities = 128/159 (80%), Positives = 145/159 (91%)
 Frame = -3

Query: 479 SCKRNKSNPCREAPTALTIQSSSAVSVNGLNIQNSQQMHFVISNSDSVRVLNVKISAPES 300
           SCKRNKSNPCR APTALTI SSS+V V GL IQNSQQMHF IS S SVR+++V++SAPE 
Sbjct: 173 SCKRNKSNPCRGAPTALTIDSSSSVWVKGLTIQNSQQMHFTISRSQSVRIIDVQVSAPED 232

Query: 299 SPNTDGIHITKSTNVVIQDCKIGTGDDCISIVNGSSGIKMKNIYCGPGHGISIGSLGKDN 120
           SPNTDGIHIT STNV++Q+CKIGTGDDCISIV+GSS IKMK IYCGPGHGISIGSLGKDN
Sbjct: 233 SPNTDGIHITDSTNVLLQNCKIGTGDDCISIVSGSSNIKMKTIYCGPGHGISIGSLGKDN 292

Query: 119 STGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAVRF 3
           S+GIVTK+VLD+A+ + TTNGLRIKTWQGGSG+VRAVR+
Sbjct: 293 SSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRY 331


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  268 bits (686), Expect = 3e-70
 Identities = 128/159 (80%), Positives = 145/159 (91%)
 Frame = -3

Query: 479  SCKRNKSNPCREAPTALTIQSSSAVSVNGLNIQNSQQMHFVISNSDSVRVLNVKISAPES 300
            SCKRNKSNPCR APTALTI SSS+V V GL IQNSQQMHF IS S SVR+++V++SAPE 
Sbjct: 822  SCKRNKSNPCRGAPTALTIDSSSSVWVKGLTIQNSQQMHFTISRSQSVRIIDVQVSAPED 881

Query: 299  SPNTDGIHITKSTNVVIQDCKIGTGDDCISIVNGSSGIKMKNIYCGPGHGISIGSLGKDN 120
            SPNTDGIHIT STNV++Q+CKIGTGDDCISIV+GSS IKMK IYCGPGHGISIGSLGKDN
Sbjct: 882  SPNTDGIHITDSTNVLLQNCKIGTGDDCISIVSGSSNIKMKTIYCGPGHGISIGSLGKDN 941

Query: 119  STGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAVRF 3
            S+GIVTK+VLD+A+ + TTNGLRIKTWQGGSG+VRAVR+
Sbjct: 942  SSGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRY 980


>ref|XP_002317091.1| predicted protein [Populus trichocarpa] gi|222860156|gb|EEE97703.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  266 bits (680), Expect = 1e-69
 Identities = 128/159 (80%), Positives = 141/159 (88%)
 Frame = -3

Query: 479 SCKRNKSNPCREAPTALTIQSSSAVSVNGLNIQNSQQMHFVISNSDSVRVLNVKISAPES 300
           SCK+NKSNPCR APTALTI SSSAV V GL I+NSQQM+FVIS S SVR+  V +S+P  
Sbjct: 144 SCKKNKSNPCRGAPTALTIDSSSAVKVKGLTIKNSQQMNFVISKSASVRISKVTVSSPGD 203

Query: 299 SPNTDGIHITKSTNVVIQDCKIGTGDDCISIVNGSSGIKMKNIYCGPGHGISIGSLGKDN 120
           SPNTDGIHIT+STNVV+QDCKIGTGDDCISIVNGSS IKMK IYCGPGHG+SIGSLGKDN
Sbjct: 204 SPNTDGIHITQSTNVVLQDCKIGTGDDCISIVNGSSAIKMKGIYCGPGHGVSIGSLGKDN 263

Query: 119 STGIVTKIVLDNAYFKETTNGLRIKTWQGGSGYVRAVRF 3
           STGIVTK+VLD A  +ETTNG+RIKTWQGG+GYVR VRF
Sbjct: 264 STGIVTKVVLDTALIRETTNGVRIKTWQGGNGYVRGVRF 302


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