BLASTX nr result

ID: Coptis24_contig00021173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021173
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571582.1| PREDICTED: putative pleiotropic drug resista...   141   7e-32
ref|XP_003597816.1| Pleiotropic drug resistance protein [Medicag...   140   9e-32
emb|CBI20978.3| unnamed protein product [Vitis vinifera]              140   1e-31
emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]   140   1e-31
ref|XP_002529327.1| ATP-binding cassette transporter, putative [...   139   2e-31

>ref|XP_003571582.1| PREDICTED: putative pleiotropic drug resistance protein 7-like
           [Brachypodium distachyon]
          Length = 1450

 Score =  141 bits (355), Expect = 7e-32
 Identities = 67/80 (83%), Positives = 71/80 (88%)
 Frame = +1

Query: 286 SGSHVSGRITYNGHGMDEFVPRRNSAYVSQDDLHIGEMTVRETLAFSARCQGVGARYDML 465
           S   VSGR+TYNGH MDEFVP+R SAY+ Q DLH+GEMTVRETLAFSARCQGVG RYDML
Sbjct: 212 SSLQVSGRVTYNGHDMDEFVPQRTSAYIGQHDLHVGEMTVRETLAFSARCQGVGTRYDML 271

Query: 466 SELSRREKVANIKPDPDIDV 525
           SELSRREK ANIKPDPDIDV
Sbjct: 272 SELSRREKEANIKPDPDIDV 291


>ref|XP_003597816.1| Pleiotropic drug resistance protein [Medicago truncatula]
           gi|355486864|gb|AES68067.1| Pleiotropic drug resistance
           protein [Medicago truncatula]
          Length = 1492

 Score =  140 bits (354), Expect = 9e-32
 Identities = 67/85 (78%), Positives = 76/85 (89%)
 Frame = +1

Query: 271 SGCT*SGSHVSGRITYNGHGMDEFVPRRNSAYVSQDDLHIGEMTVRETLAFSARCQGVGA 450
           SG   S   +SG +TYNGHG++EFVP+R +AY+SQ D+HIGEMTVRETLAFSARCQGVG+
Sbjct: 261 SGKLDSSFQLSGNVTYNGHGLNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGS 320

Query: 451 RYDMLSELSRREKVANIKPDPDIDV 525
           RYDMLSELSRREKVANIKPDPDIDV
Sbjct: 321 RYDMLSELSRREKVANIKPDPDIDV 345


>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
          Length = 1436

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/76 (85%), Positives = 73/76 (96%)
 Frame = +1

Query: 298 VSGRITYNGHGMDEFVPRRNSAYVSQDDLHIGEMTVRETLAFSARCQGVGARYDMLSELS 477
           +SGR++YNGHGMDEFVP+R+SAY+SQ DLHIGEMTVRETLAFSARCQGVG  YDML+ELS
Sbjct: 207 LSGRVSYNGHGMDEFVPQRSSAYISQYDLHIGEMTVRETLAFSARCQGVGTGYDMLAELS 266

Query: 478 RREKVANIKPDPDIDV 525
           RREKVANIKPDPDID+
Sbjct: 267 RREKVANIKPDPDIDI 282


>emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]
          Length = 1441

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/76 (85%), Positives = 73/76 (96%)
 Frame = +1

Query: 298 VSGRITYNGHGMDEFVPRRNSAYVSQDDLHIGEMTVRETLAFSARCQGVGARYDMLSELS 477
           +SGR++YNGHGMDEFVP+R+SAY+SQ DLHIGEMTVRETLAFSARCQGVG  YDML+ELS
Sbjct: 207 LSGRVSYNGHGMDEFVPQRSSAYISQYDLHIGEMTVRETLAFSARCQGVGTGYDMLAELS 266

Query: 478 RREKVANIKPDPDIDV 525
           RREKVANIKPDPDID+
Sbjct: 267 RREKVANIKPDPDIDI 282


>ref|XP_002529327.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223531198|gb|EEF33044.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1417

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/75 (84%), Positives = 72/75 (96%)
 Frame = +1

Query: 301 SGRITYNGHGMDEFVPRRNSAYVSQDDLHIGEMTVRETLAFSARCQGVGARYDMLSELSR 480
           SGR+TYNGHGMDEF+P+R +AY+SQ DLHIGEMTVRETLAFSARCQGVG+RYD+L+EL+R
Sbjct: 211 SGRVTYNGHGMDEFIPQRTAAYISQHDLHIGEMTVRETLAFSARCQGVGSRYDLLAELAR 270

Query: 481 REKVANIKPDPDIDV 525
           REK ANIKPDPDIDV
Sbjct: 271 REKAANIKPDPDIDV 285


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