BLASTX nr result

ID: Coptis24_contig00021172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021172
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   140   2e-31
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch...   132   7e-29
ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|2...   131   1e-28
gb|ABK96073.1| unknown [Populus trichocarpa]                          131   1e-28
ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   130   2e-28

>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
            [Vitis vinifera] gi|297734621|emb|CBI16672.3| unnamed
            protein product [Vitis vinifera]
          Length = 1071

 Score =  140 bits (353), Expect = 2e-31
 Identities = 68/83 (81%), Positives = 75/83 (90%)
 Frame = +2

Query: 5    FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184
            FET EER LW AFL V+NK++PGIEVDDF EASSQLLQPL+ FFN+VFVMVE+ER+R NR
Sbjct: 989  FETNEERALWRAFLSVRNKIYPGIEVDDFFEASSQLLQPLEDFFNNVFVMVEEERIRKNR 1048

Query: 185  LALLKNIADLPKGIADLSVLPGF 253
            LALLK IADLPKGIADLSVLPGF
Sbjct: 1049 LALLKKIADLPKGIADLSVLPGF 1071


>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
            Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 1069

 Score =  132 bits (331), Expect = 7e-29
 Identities = 64/83 (77%), Positives = 72/83 (86%)
 Frame = +2

Query: 5    FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184
            FET EER LWS FL  K+K+ P IEVD+FVE SS+LLQPL+ FFN+VFVMVEDER+R NR
Sbjct: 987  FETAEERALWSIFLSTKSKIFPDIEVDEFVEVSSELLQPLEDFFNNVFVMVEDERIRKNR 1046

Query: 185  LALLKNIADLPKGIADLSVLPGF 253
            LALLK IADLP+GIADLSVLPGF
Sbjct: 1047 LALLKKIADLPRGIADLSVLPGF 1069


>ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  131 bits (329), Expect = 1e-28
 Identities = 62/83 (74%), Positives = 72/83 (86%)
 Frame = +2

Query: 5   FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184
           FET EER LWS F   K+K++PGIE+D+FVE SS+LLQPL+ FFN+VFVMVEDER+R NR
Sbjct: 430 FETDEERALWSTFTSTKSKIYPGIEIDEFVEISSELLQPLEDFFNNVFVMVEDERIRKNR 489

Query: 185 LALLKNIADLPKGIADLSVLPGF 253
           LALL  IADLP+GIADLSVLPGF
Sbjct: 490 LALLNKIADLPRGIADLSVLPGF 512


>gb|ABK96073.1| unknown [Populus trichocarpa]
          Length = 512

 Score =  131 bits (329), Expect = 1e-28
 Identities = 62/83 (74%), Positives = 72/83 (86%)
 Frame = +2

Query: 5   FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184
           FET EER LWS F   K+K++PGIE+D+FVE SS+LLQPL+ FFN+VFVMVEDER+R NR
Sbjct: 430 FETDEERALWSTFTSTKSKIYPGIEIDEFVEISSELLQPLEDFFNNVFVMVEDERIRKNR 489

Query: 185 LALLKNIADLPKGIADLSVLPGF 253
           LALL  IADLP+GIADLSVLPGF
Sbjct: 490 LALLNKIADLPRGIADLSVLPGF 512


>ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2,
           chloroplastic/mitochondrial-like, partial [Cucumis
           sativus]
          Length = 534

 Score =  130 bits (327), Expect = 2e-28
 Identities = 61/83 (73%), Positives = 71/83 (85%)
 Frame = +2

Query: 5   FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184
           FE+ EER LW+ FL +KNKVHPGIEVD+F E SS+L+QPL+ FF HVFVMVEDE++R NR
Sbjct: 452 FESNEERALWNTFLSIKNKVHPGIEVDEFFEISSKLIQPLEDFFEHVFVMVEDEKIRKNR 511

Query: 185 LALLKNIADLPKGIADLSVLPGF 253
           LALLK IADLP GIADLS+L GF
Sbjct: 512 LALLKRIADLPSGIADLSLLSGF 534


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