BLASTX nr result
ID: Coptis24_contig00021172
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021172 (647 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop... 140 2e-31 ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch... 132 7e-29 ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|2... 131 1e-28 gb|ABK96073.1| unknown [Populus trichocarpa] 131 1e-28 ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 130 2e-28 >ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like [Vitis vinifera] gi|297734621|emb|CBI16672.3| unnamed protein product [Vitis vinifera] Length = 1071 Score = 140 bits (353), Expect = 2e-31 Identities = 68/83 (81%), Positives = 75/83 (90%) Frame = +2 Query: 5 FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184 FET EER LW AFL V+NK++PGIEVDDF EASSQLLQPL+ FFN+VFVMVE+ER+R NR Sbjct: 989 FETNEERALWRAFLSVRNKIYPGIEVDDFFEASSQLLQPLEDFFNNVFVMVEEERIRKNR 1048 Query: 185 LALLKNIADLPKGIADLSVLPGF 253 LALLK IADLPKGIADLSVLPGF Sbjct: 1049 LALLKKIADLPKGIADLSVLPGF 1071 >ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] gi|223548759|gb|EEF50248.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] Length = 1069 Score = 132 bits (331), Expect = 7e-29 Identities = 64/83 (77%), Positives = 72/83 (86%) Frame = +2 Query: 5 FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184 FET EER LWS FL K+K+ P IEVD+FVE SS+LLQPL+ FFN+VFVMVEDER+R NR Sbjct: 987 FETAEERALWSIFLSTKSKIFPDIEVDEFVEVSSELLQPLEDFFNNVFVMVEDERIRKNR 1046 Query: 185 LALLKNIADLPKGIADLSVLPGF 253 LALLK IADLP+GIADLSVLPGF Sbjct: 1047 LALLKKIADLPRGIADLSVLPGF 1069 >ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1| predicted protein [Populus trichocarpa] Length = 512 Score = 131 bits (329), Expect = 1e-28 Identities = 62/83 (74%), Positives = 72/83 (86%) Frame = +2 Query: 5 FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184 FET EER LWS F K+K++PGIE+D+FVE SS+LLQPL+ FFN+VFVMVEDER+R NR Sbjct: 430 FETDEERALWSTFTSTKSKIYPGIEIDEFVEISSELLQPLEDFFNNVFVMVEDERIRKNR 489 Query: 185 LALLKNIADLPKGIADLSVLPGF 253 LALL IADLP+GIADLSVLPGF Sbjct: 490 LALLNKIADLPRGIADLSVLPGF 512 >gb|ABK96073.1| unknown [Populus trichocarpa] Length = 512 Score = 131 bits (329), Expect = 1e-28 Identities = 62/83 (74%), Positives = 72/83 (86%) Frame = +2 Query: 5 FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184 FET EER LWS F K+K++PGIE+D+FVE SS+LLQPL+ FFN+VFVMVEDER+R NR Sbjct: 430 FETDEERALWSTFTSTKSKIYPGIEIDEFVEISSELLQPLEDFFNNVFVMVEDERIRKNR 489 Query: 185 LALLKNIADLPKGIADLSVLPGF 253 LALL IADLP+GIADLSVLPGF Sbjct: 490 LALLNKIADLPRGIADLSVLPGF 512 >ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like, partial [Cucumis sativus] Length = 534 Score = 130 bits (327), Expect = 2e-28 Identities = 61/83 (73%), Positives = 71/83 (85%) Frame = +2 Query: 5 FETREERDLWSAFLEVKNKVHPGIEVDDFVEASSQLLQPLDSFFNHVFVMVEDERVRMNR 184 FE+ EER LW+ FL +KNKVHPGIEVD+F E SS+L+QPL+ FF HVFVMVEDE++R NR Sbjct: 452 FESNEERALWNTFLSIKNKVHPGIEVDEFFEISSKLIQPLEDFFEHVFVMVEDEKIRKNR 511 Query: 185 LALLKNIADLPKGIADLSVLPGF 253 LALLK IADLP GIADLS+L GF Sbjct: 512 LALLKRIADLPSGIADLSLLSGF 534