BLASTX nr result

ID: Coptis24_contig00021168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021168
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631826.1| PREDICTED: uncharacterized protein LOC100249...    59   3e-07
ref|XP_002284083.2| PREDICTED: uncharacterized protein LOC100249...    59   3e-07

>ref|XP_003631826.1| PREDICTED: uncharacterized protein LOC100249280 isoform 2 [Vitis
           vinifera]
          Length = 663

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
 Frame = -1

Query: 183 VYGGTQGGAFPPPPWEGMATVASDGNQQAGTHHLQPMQVPQVAATHSQLVQSFTQ---PM 13
           VYG   G + PPPPWE   T   D +Q AG  + QPMQVPQ  ATH+Q +        P 
Sbjct: 457 VYGAQSGSSLPPPPWEAQPT---DNSQLAGAQYPQPMQVPQGFATHAQPMPGSMYPQGPQ 513

Query: 12  PMGN 1
           PMGN
Sbjct: 514 PMGN 517


>ref|XP_002284083.2| PREDICTED: uncharacterized protein LOC100249280 isoform 1 [Vitis
           vinifera] gi|296081876|emb|CBI20881.3| unnamed protein
           product [Vitis vinifera]
          Length = 691

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
 Frame = -1

Query: 183 VYGGTQGGAFPPPPWEGMATVASDGNQQAGTHHLQPMQVPQVAATHSQLVQSFTQ---PM 13
           VYG   G + PPPPWE   T   D +Q AG  + QPMQVPQ  ATH+Q +        P 
Sbjct: 485 VYGAQSGSSLPPPPWEAQPT---DNSQLAGAQYPQPMQVPQGFATHAQPMPGSMYPQGPQ 541

Query: 12  PMGN 1
           PMGN
Sbjct: 542 PMGN 545


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