BLASTX nr result

ID: Coptis24_contig00021164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021164
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277969.1| PREDICTED: mRNA-capping enzyme [Vitis vinife...    66   3e-09
emb|CAN61178.1| hypothetical protein VITISV_037120 [Vitis vinifera]    66   3e-09
ref|XP_002308205.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003521239.1| PREDICTED: mRNA-capping enzyme-like [Glycine...    61   1e-07
ref|XP_002322955.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002277969.1| PREDICTED: mRNA-capping enzyme [Vitis vinifera]
           gi|297740251|emb|CBI30433.3| unnamed protein product
           [Vitis vinifera]
          Length = 677

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
 Frame = -2

Query: 173 KRDYPSE----GPNQSQRGAAGFQNKRFRPFDRNKLPDGWLDCPSYGENIDYIIPSKVPL 6
           KR+ P +    GP+   R    FQ +  R  DRNKLP GWLDCP++G+ I++IIPSKVPL
Sbjct: 49  KRERPDDRSVNGPSVHDRP---FQTRNHRSHDRNKLPPGWLDCPAFGQEINFIIPSKVPL 105

Query: 5   G 3
           G
Sbjct: 106 G 106


>emb|CAN61178.1| hypothetical protein VITISV_037120 [Vitis vinifera]
          Length = 161

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
 Frame = -2

Query: 173 KRDYPSE----GPNQSQRGAAGFQNKRFRPFDRNKLPDGWLDCPSYGENIDYIIPSKVPL 6
           KR+ P +    GP+   R    FQ +  R  DRNKLP GWLDCP++G+ I++IIPSKVPL
Sbjct: 69  KRERPDDRSVNGPSVHDRP---FQTRNHRSHDRNKLPPGWLDCPAFGQEINFIIPSKVPL 125

Query: 5   G 3
           G
Sbjct: 126 G 126


>ref|XP_002308205.1| predicted protein [Populus trichocarpa] gi|222854181|gb|EEE91728.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 23/39 (58%), Positives = 34/39 (87%)
 Frame = -2

Query: 119 FQNKRFRPFDRNKLPDGWLDCPSYGENIDYIIPSKVPLG 3
           F +KR++ +D++KLP GWLDCP++G+ I+ I+PSKVPLG
Sbjct: 74  FPSKRYKSYDKSKLPPGWLDCPAFGQEINCIVPSKVPLG 112


>ref|XP_003521239.1| PREDICTED: mRNA-capping enzyme-like [Glycine max]
          Length = 633

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -2

Query: 113 NKRFRPFDRNKLPDGWLDCPSYGENIDYIIPSKVPLG 3
           N   RP+DRN +PDGWLDCP +G+ I  IIPSKVPLG
Sbjct: 32  NTNSRPYDRNTVPDGWLDCPPHGQEIGCIIPSKVPLG 68


>ref|XP_002322955.1| predicted protein [Populus trichocarpa] gi|222867585|gb|EEF04716.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 22/39 (56%), Positives = 33/39 (84%)
 Frame = -2

Query: 119 FQNKRFRPFDRNKLPDGWLDCPSYGENIDYIIPSKVPLG 3
           F +K ++ +D++KLP GWLDCP++G+ I+ I+PSKVPLG
Sbjct: 74  FPSKHYKSYDKSKLPAGWLDCPAFGQEINCIVPSKVPLG 112


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