BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021156
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   100   2e-19
ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...    94   9e-18
ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|NP_564488.1| sequence-specific DNA binding transcription fac...    85   5e-15

>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
           gi|302142747|emb|CBI19950.3| unnamed protein product
           [Vitis vinifera]
          Length = 358

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/65 (69%), Positives = 53/65 (81%)
 Frame = +2

Query: 23  KVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCSTCDAVIGDAKQYRDHFKSEWHKHN 202
           K   D V++LS+KVQ+Q IS G+ ST  E KQNKCSTCDA +GD+KQYR+HFKSEWHKHN
Sbjct: 265 KESADPVLQLSEKVQRQTISVGSSSTEGEVKQNKCSTCDAFVGDSKQYREHFKSEWHKHN 324

Query: 203 LKRKT 217
           L RKT
Sbjct: 325 LGRKT 329


>ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/69 (63%), Positives = 55/69 (79%)
 Frame = +2

Query: 11  SSHSKVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCSTCDAVIGDAKQYRDHFKSEW 190
           S+  K  TD+ V+LS+K+QKQ +S+     GAE KQNKCSTC+  +GDAKQ+RDHFKS+W
Sbjct: 261 SALPKGSTDSAVQLSEKIQKQTLSDEK-KAGAEVKQNKCSTCNVSVGDAKQFRDHFKSDW 319

Query: 191 HKHNLKRKT 217
           HKHNLKRKT
Sbjct: 320 HKHNLKRKT 328


>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
           communis] gi|223540466|gb|EEF42033.1|
           Shwachman-Bodian-Diamond syndrome protein, putative
           [Ricinus communis]
          Length = 356

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +2

Query: 11  SSHSKVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCSTCDAVIGDAKQYRDHFKSEW 190
           +S  K  TD+VV+LS+K+QKQ IS    + G E KQ+KC+TC+A +GDAK+YRDHFKSEW
Sbjct: 260 ASIPKESTDSVVQLSEKIQKQTISAEKKNEG-EVKQHKCNTCNAFVGDAKEYRDHFKSEW 318

Query: 191 HKHNLKRKT 217
           HKHNL+RKT
Sbjct: 319 HKHNLRRKT 327


>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = +2

Query: 23  KVLTDAVVKLSQKVQKQAISEGNGSTGAEAKQNKCSTCDAVIGDAKQYRDHFKSEWHKHN 202
           K   D+ V+LS+K+QKQ ISE        AKQNKCSTC+A +GDAKQ+RDHFKS+WHKHN
Sbjct: 264 KESADSEVQLSEKIQKQTISEEK-KADTLAKQNKCSTCNAFVGDAKQFRDHFKSDWHKHN 322

Query: 203 LKRKT 217
           LKRKT
Sbjct: 323 LKRKT 327


>ref|NP_564488.1| sequence-specific DNA binding transcription factor [Arabidopsis
           thaliana] gi|7523664|gb|AAF63104.1|AC006423_5 Unknown
           protein [Arabidopsis thaliana]
           gi|15450898|gb|AAK96720.1| Unknown protein [Arabidopsis
           thaliana] gi|30725592|gb|AAP37818.1| At1g43860
           [Arabidopsis thaliana] gi|332193881|gb|AEE32002.1|
           sequence-specific DNA binding transcription factor
           [Arabidopsis thaliana]
          Length = 370

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
 Frame = +2

Query: 8   SSSHSKVLTDAVVKLSQKVQKQAISEGNG---STGAEAKQNKCSTCDAVIGDAKQYRDHF 178
           + + +K LTD VV+LS+K+QKQ IS  +      G E K  KCSTC+  +G+AKQYR+H 
Sbjct: 269 AETETKDLTDPVVELSKKLQKQEISTTDNIKQEGGEEKKGTKCSTCNTFVGEAKQYREHC 328

Query: 179 KSEWHKHNLKRKT 217
           KS+WHKHNLKRKT
Sbjct: 329 KSDWHKHNLKRKT 341