BLASTX nr result

ID: Coptis24_contig00021150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021150
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 ho...   384   e-104
emb|CBI32813.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 ho...   372   e-101
ref|XP_004165808.1| PREDICTED: calmodulin-interacting protein 11...   367   2e-99

>ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 homolog AF_1297-like [Vitis
            vinifera]
          Length = 1030

 Score =  384 bits (985), Expect = e-104
 Identities = 193/256 (75%), Positives = 221/256 (86%)
 Frame = +2

Query: 2    PQKHRDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGES 181
            PQKH+D  +RIGT+PP GVLLFGPPGCSKTL+AR VASEAGLNFL+VKGPELFSKWVGES
Sbjct: 760  PQKHQDAFKRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 819

Query: 182  EKAVKSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVD 361
            EKAV+S+FAKARANAPSIIFFDEIDGLA+IRGKE++G SV+DRVMSQLLVELDGL +RVD
Sbjct: 820  EKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESDGVSVADRVMSQLLVELDGLHQRVD 879

Query: 362  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCSSDVSMKELA 541
            VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP+E+DR DIFHIH+ ++P SSDVS+ ELA
Sbjct: 880  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNESDRADIFHIHLCKIPFSSDVSIGELA 939

Query: 542  CLTEGYTGADISLICRXXXXXXXXXSLNAFEISMEHFEIGLGRVQPSDVSSYQELSSKFQ 721
             LTEGYTGADISLICR         +L+A EI+MEH +  + +VQPS++ SYQELS+KFQ
Sbjct: 940  FLTEGYTGADISLICREAAIAAIEDNLDASEITMEHLKTAIRQVQPSELQSYQELSTKFQ 999

Query: 722  RLVLSGTAVDDRSCKL 769
            RLV S    D+    L
Sbjct: 1000 RLVHSSDKRDESGLPL 1015



 Score =  154 bits (389), Expect = 4e-35
 Identities = 81/192 (42%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
 Frame = +2

Query: 14   RDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGESEKAV 193
            ++ L  +G +   GVLL GPPG  KT LA+    +AG+N  SV G E+ S++ GESE+A+
Sbjct: 444  KNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVNGAEIVSQYYGESEQAL 503

Query: 194  KSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVDVTVI 373
              +F  A   AP+++F DE+D  AI   +++ G  +S R+++ LL  +DG+ +   + VI
Sbjct: 504  HEIFDSASQAAPAVVFIDELD--AIAPARKDGGEELSHRIVATLLNLMDGISRTDGILVI 561

Query: 374  AATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCS-SDVSMKELACLT 550
            AATNRPD I+PAL RPGR DR + +G PS   R DI    +  M  S SD+ +++LA +T
Sbjct: 562  AATNRPDSIEPALRRPGRLDREMEIGVPSPGQRYDILLNLLSEMENSLSDMQIQQLATVT 621

Query: 551  EGYTGADISLIC 586
             G+ GAD++ +C
Sbjct: 622  HGFVGADLAALC 633


>emb|CBI32813.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  384 bits (985), Expect = e-104
 Identities = 193/256 (75%), Positives = 221/256 (86%)
 Frame = +2

Query: 2    PQKHRDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGES 181
            PQKH+D  +RIGT+PP GVLLFGPPGCSKTL+AR VASEAGLNFL+VKGPELFSKWVGES
Sbjct: 686  PQKHQDAFKRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 745

Query: 182  EKAVKSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVD 361
            EKAV+S+FAKARANAPSIIFFDEIDGLA+IRGKE++G SV+DRVMSQLLVELDGL +RVD
Sbjct: 746  EKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESDGVSVADRVMSQLLVELDGLHQRVD 805

Query: 362  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCSSDVSMKELA 541
            VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP+E+DR DIFHIH+ ++P SSDVS+ ELA
Sbjct: 806  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNESDRADIFHIHLCKIPFSSDVSIGELA 865

Query: 542  CLTEGYTGADISLICRXXXXXXXXXSLNAFEISMEHFEIGLGRVQPSDVSSYQELSSKFQ 721
             LTEGYTGADISLICR         +L+A EI+MEH +  + +VQPS++ SYQELS+KFQ
Sbjct: 866  FLTEGYTGADISLICREAAIAAIEDNLDASEITMEHLKTAIRQVQPSELQSYQELSTKFQ 925

Query: 722  RLVLSGTAVDDRSCKL 769
            RLV S    D+    L
Sbjct: 926  RLVHSSDKRDESGLPL 941



 Score =  155 bits (393), Expect = 1e-35
 Identities = 87/232 (37%), Positives = 135/232 (58%), Gaps = 9/232 (3%)
 Frame = +2

Query: 14   RDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGESEKAV 193
            ++ L  +G +   GVLL GPPG  KT LA+    +AG+N  SV G E+ S++ GESE+A+
Sbjct: 423  KNTLSSMGLRTTKGVLLHGPPGTGKTSLAQLCICDAGVNLFSVNGAEIVSQYYGESEQAL 482

Query: 194  KSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVDVTVI 373
              +F  A   AP+++F DE+D  AI   +++ G  +S R+++ LL  +DG+ +   + VI
Sbjct: 483  HEIFDSASQAAPAVVFIDELD--AIAPARKDGGEELSHRIVATLLNLMDGISRTDGILVI 540

Query: 374  AATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCS-SDVSMKELACLT 550
            AATNRPD I+PAL RPGR DR + +G PS   R DI    +  M  S SD+ +++LA +T
Sbjct: 541  AATNRPDSIEPALRRPGRLDREMEIGVPSPGQRYDILLNLLSEMENSLSDMQIQQLATVT 600

Query: 551  EGYTGADISLICRXXXXXXXXXSLNAF--------EISMEHFEIGLGRVQPS 682
             G+ GAD++ +C           + +F         ++ E FE    +++PS
Sbjct: 601  HGFVGADLAALCNEAALVCLRRYVKSFIMEEECMLVVTFEDFEKARMKIRPS 652


>ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|222854846|gb|EEE92393.1|
            predicted protein [Populus trichocarpa]
          Length = 1042

 Score =  376 bits (965), Expect = e-102
 Identities = 180/245 (73%), Positives = 219/245 (89%)
 Frame = +2

Query: 2    PQKHRDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGES 181
            PQ H+D  +RIGT+PP G+L+FGPPGCSKTL+AR VAS+AGLNFL+VKGPELFSKWVGES
Sbjct: 777  PQTHQDAFKRIGTRPPTGILMFGPPGCSKTLMARAVASKAGLNFLAVKGPELFSKWVGES 836

Query: 182  EKAVKSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVD 361
            EKAV+S+FAKARANAPSIIFFDEIDGLA+IRGKE++G SVSDRVMSQLL+ELDGLQ+RV+
Sbjct: 837  EKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESDGVSVSDRVMSQLLIELDGLQQRVN 896

Query: 362  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCSSDVSMKELA 541
            VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP++ DREDIF IH+ ++PCSSDV++KELA
Sbjct: 897  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNQNDREDIFRIHLHKVPCSSDVNIKELA 956

Query: 542  CLTEGYTGADISLICRXXXXXXXXXSLNAFEISMEHFEIGLGRVQPSDVSSYQELSSKFQ 721
            CLT+G TGADI+LICR         +++A E+ M+H +  + +VQP++++SYQ+LS+KFQ
Sbjct: 957  CLTDGCTGADIALICREAAVAAIEENIDASEVPMQHLKTAIQQVQPTEINSYQDLSAKFQ 1016

Query: 722  RLVLS 736
            RLV S
Sbjct: 1017 RLVHS 1021



 Score =  166 bits (419), Expect = 1e-38
 Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 1/192 (0%)
 Frame = +2

Query: 14  RDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGESEKAV 193
           ++ L   G +   GVLL GPPG  KT LAR    +AG+N  SV GPE+FS++ GESE+A+
Sbjct: 429 KNTLSCFGLRTTKGVLLHGPPGTGKTSLARLCVIDAGVNLFSVNGPEIFSQYYGESEQAM 488

Query: 194 KSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVDVTVI 373
             VF  A  +AP+++F DE+D  AI   +++ G  +S R+++ LL  +DG+ +   + VI
Sbjct: 489 HKVFDSACQSAPAVVFIDELD--AIAPARKDGGEELSQRMVATLLNLMDGIARTDGLLVI 546

Query: 374 AATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCS-SDVSMKELACLT 550
           AATNRPD I+PAL RPGR DR + +G PS + R DI H  +  M  S SD+ +K+LA  T
Sbjct: 547 AATNRPDSIEPALRRPGRLDREIEIGVPSPSQRLDILHTLLSEMEHSVSDMQLKQLAMAT 606

Query: 551 EGYTGADISLIC 586
            G+ GAD++ +C
Sbjct: 607 HGFVGADLAALC 618


>ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
            [Glycine max]
          Length = 1036

 Score =  372 bits (955), Expect = e-101
 Identities = 183/243 (75%), Positives = 212/243 (87%)
 Frame = +2

Query: 2    PQKHRDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGES 181
            PQKH D   RIGT+PP GVL+FGPPGCSKTL+AR VASEAGLNFL+VKGPELFSKWVGES
Sbjct: 762  PQKHHDAFNRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 821

Query: 182  EKAVKSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVD 361
            EKAV+S+FAKARANAPSI+FFDEID LA+ RGKE++G SVSDRVMSQLLVELDGL +RV+
Sbjct: 822  EKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVN 881

Query: 362  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCSSDVSMKELA 541
            VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP+E DRE+IF IH+R++PC SDVS+KELA
Sbjct: 882  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEVDREEIFRIHLRKIPCGSDVSLKELA 941

Query: 542  CLTEGYTGADISLICRXXXXXXXXXSLNAFEISMEHFEIGLGRVQPSDVSSYQELSSKFQ 721
             LT+G TGADISLICR         SL+A  I+MEH ++ + ++QPS+V SYQ+LS+KFQ
Sbjct: 942  RLTDGCTGADISLICREAAVAAIEESLDASVITMEHLKMAIKQIQPSEVHSYQKLSTKFQ 1001

Query: 722  RLV 730
            R V
Sbjct: 1002 RAV 1004



 Score =  148 bits (373), Expect = 3e-33
 Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
 Frame = +2

Query: 17   DDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGESEKAVK 196
            D L   G +   GVLL GPPG  KT LA+  A + G+ F  + GPE+ +++ GESE+ + 
Sbjct: 438  DALSSFGLRTTRGVLLHGPPGTGKTSLAQLCAHDVGVKFFPINGPEIVTQYYGESEQQLH 497

Query: 197  SVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVDVTVIA 376
             +F  A   AP+++F DE+D  AI   +++ G  +S R+++ LL  +DG+ +   + VIA
Sbjct: 498  ELFDSAIQAAPAVVFIDELD--AIAPARKDGGEELSQRLVATLLNLVDGISRSEGLLVIA 555

Query: 377  ATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCS-SDVSMKELACLTE 553
            ATNRPD I+PAL RPGRFD+ + +G PS   R DI    +  M  S +++ ++ LA +T 
Sbjct: 556  ATNRPDHIEPALRRPGRFDKEIEIGVPSPNQRSDILLTLLSEMDHSLAELQIENLATVTH 615

Query: 554  GYTGADISLIC 586
            G+ GAD++ +C
Sbjct: 616  GFVGADLAALC 626


>ref|XP_004165808.1| PREDICTED: calmodulin-interacting protein 111-like [Cucumis sativus]
          Length = 1027

 Score =  367 bits (943), Expect = 2e-99
 Identities = 184/257 (71%), Positives = 217/257 (84%)
 Frame = +2

Query: 2    PQKHRDDLERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGES 181
            PQKH+D  +RIGT+PPAGVLLFGPPGCSKTL+AR VASEAGLNFL+VKGPELFSKWVGES
Sbjct: 742  PQKHQDAFKRIGTRPPAGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGES 801

Query: 182  EKAVKSVFAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVD 361
            EKAV+S+FAKARANAPSI+FFDEIDGLA+IRGKE++G SVSDRVMSQLLVELDGL +RV 
Sbjct: 802  EKAVRSLFAKARANAPSIVFFDEIDGLAVIRGKESDGVSVSDRVMSQLLVELDGLHQRVG 861

Query: 362  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCSSDVSMKELA 541
            VTVIAATNRPDKIDPALLRPGRFDRLLYVGPP+E++RE+IF IH+ ++PCS DVS ++LA
Sbjct: 862  VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNESEREEIFRIHLCKVPCSPDVSTRKLA 921

Query: 542  CLTEGYTGADISLICRXXXXXXXXXSLNAFEISMEHFEIGLGRVQPSDVSSYQELSSKFQ 721
             L++G TGADISLICR         +L A  ISM+H E     V+PS+ + Y+ELSS+FQ
Sbjct: 922  SLSQGCTGADISLICRESALLALEENLEASVISMQHLETAARHVKPSETAPYRELSSRFQ 981

Query: 722  RLVLSGTAVDDRSCKLS 772
            RLV S +   +  C+ S
Sbjct: 982  RLVCSSSQEVNVVCQQS 998



 Score =  150 bits (380), Expect = 4e-34
 Identities = 80/189 (42%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
 Frame = +2

Query: 23  LERIGTQPPAGVLLFGPPGCSKTLLARTVASEAGLNFLSVKGPELFSKWVGESEKAVKSV 202
           +  +G +   GVLL GPPG  KT LA+  A +AG+N   + GPE+ S++ GESE+A+  V
Sbjct: 423 MSSLGFRTTKGVLLHGPPGTGKTSLAQLSAHDAGVNLFYLNGPEIISQYHGESEQALHDV 482

Query: 203 FAKARANAPSIIFFDEIDGLAIIRGKENNGASVSDRVMSQLLVELDGLQKRVDVTVIAAT 382
           F +A   AP+++  DE+D  AI   +++ G  +S R+++ LL  +DG+++     VIA+T
Sbjct: 483 FEEASQAAPAVVLIDELD--AIAPARKDGGEELSQRIVATLLNLMDGIKRSGGPLVIAST 540

Query: 383 NRPDKIDPALLRPGRFDRLLYVGPPSEADREDIFHIHVRRMPCS-SDVSMKELACLTEGY 559
           NRPD I+PAL RPGR DR + +G PS   R DI H  +  M  S S V ++ LA +T G+
Sbjct: 541 NRPDSIEPALRRPGRLDREIEIGVPSPNQRLDILHTILSEMEHSLSVVQVQHLAMVTHGF 600

Query: 560 TGADISLIC 586
            GAD++ +C
Sbjct: 601 VGADLAALC 609


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