BLASTX nr result

ID: Coptis24_contig00021141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021141
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37208.3| unnamed protein product [Vitis vinifera]              206   6e-51
ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258...   206   6e-51
emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]   167   5e-39
ref|XP_003541374.1| PREDICTED: uncharacterized protein LOC100781...   159   8e-37
ref|XP_002886273.1| hypothetical protein ARALYDRAFT_319882 [Arab...   149   9e-34

>emb|CBI37208.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  206 bits (525), Expect = 6e-51
 Identities = 119/293 (40%), Positives = 160/293 (54%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1020 CLILDGDPEKHVQVANDDSGNNSDELLIVSEKGQLACRDYPHPRHLCARFPXXXXXXXXX 841
            C++LDGDP+  V    DDS N SD+LL+V EKGQ+ACRDYPH R  CA+F          
Sbjct: 72   CVVLDGDPDNPVPTV-DDSENGSDDLLVVGEKGQIACRDYPHSRDQCAKF---------- 120

Query: 840  XXXXXXXXXXXXXXXXLCARFPFGSNPHERYCDQCHCYVCDTQAPCMYWGTGVSSTDHCH 661
                                 PF S  H+R+CDQCHCYVCD+ APC +WGTG++  DHCH
Sbjct: 121  ---------------------PFNSTTHDRHCDQCHCYVCDSLAPCGHWGTGMNIVDHCH 159

Query: 660  STDKEEIWKLQRKYFGQVNKAPSSALDDPANTLPIAPPVHKSIPALTHLQTLNSVHSQIP 481
            +T+K+E W  QRK F ++ K+    +   A  LP     + S P L      N +     
Sbjct: 160  ATNKDEFWVDQRKSF-RLGKSQQVPIQKHATALPQVSQ-NSSFPLLQP----NPIWQN-- 211

Query: 480  AVSNSPTLRSCSSTSNFGVPNIISNRNHQQSGVTVSRSRL-PHQVASRSTALAPGSGSIA 304
             VS   ++ +CSS +N GVPN  S   +Q+S V + R+R  PH V+ +        G+ +
Sbjct: 212  QVSRPTSIHACSSRTNVGVPNTASLTRNQRSEVDLGRTRFQPHLVSQKP------HGTQS 265

Query: 303  SNIIRRDKDNGAGTLGPRFGSPQVNFKRVGSGAITLTKLRSGHGSHDKTNHIY 145
            + I R+D+ +G G LGP+F S Q  FKR GSG   LT  RSG+G  +  NH Y
Sbjct: 266  NIINRKDRGHGFGPLGPQFSSSQPMFKRTGSGRGALTANRSGYGLPNNINHAY 318


>ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258397 [Vitis vinifera]
          Length = 511

 Score =  206 bits (525), Expect = 6e-51
 Identities = 119/293 (40%), Positives = 160/293 (54%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1020 CLILDGDPEKHVQVANDDSGNNSDELLIVSEKGQLACRDYPHPRHLCARFPXXXXXXXXX 841
            C++LDGDP+  V    DDS N SD+LL+V EKGQ+ACRDYPH R  CA+F          
Sbjct: 72   CVVLDGDPDNPVPTV-DDSENGSDDLLVVGEKGQIACRDYPHSRDQCAKF---------- 120

Query: 840  XXXXXXXXXXXXXXXXLCARFPFGSNPHERYCDQCHCYVCDTQAPCMYWGTGVSSTDHCH 661
                                 PF S  H+R+CDQCHCYVCD+ APC +WGTG++  DHCH
Sbjct: 121  ---------------------PFNSTTHDRHCDQCHCYVCDSLAPCGHWGTGMNIVDHCH 159

Query: 660  STDKEEIWKLQRKYFGQVNKAPSSALDDPANTLPIAPPVHKSIPALTHLQTLNSVHSQIP 481
            +T+K+E W  QRK F ++ K+    +   A  LP     + S P L      N +     
Sbjct: 160  ATNKDEFWVDQRKSF-RLGKSQQVPIQKHATALPQVSQ-NSSFPLLQP----NPIWQN-- 211

Query: 480  AVSNSPTLRSCSSTSNFGVPNIISNRNHQQSGVTVSRSRL-PHQVASRSTALAPGSGSIA 304
             VS   ++ +CSS +N GVPN  S   +Q+S V + R+R  PH V+ +        G+ +
Sbjct: 212  QVSRPTSIHACSSRTNVGVPNTASLTRNQRSEVDLGRTRFQPHLVSQKP------HGTQS 265

Query: 303  SNIIRRDKDNGAGTLGPRFGSPQVNFKRVGSGAITLTKLRSGHGSHDKTNHIY 145
            + I R+D+ +G G LGP+F S Q  FKR GSG   LT  RSG+G  +  NH Y
Sbjct: 266  NIINRKDRGHGFGPLGPQFSSSQPMFKRTGSGRGALTANRSGYGLPNNINHAY 318


>emb|CAN61503.1| hypothetical protein VITISV_011734 [Vitis vinifera]
          Length = 441

 Score =  167 bits (422), Expect = 5e-39
 Identities = 98/260 (37%), Positives = 135/260 (51%), Gaps = 1/260 (0%)
 Frame = -2

Query: 921 QLACRDYPHPRHLCARFPXXXXXXXXXXXXXXXXXXXXXXXXXLCARFPFGSNPHERYCD 742
           ++ACRDYPH R  CA+F                               PF S  H+R+CD
Sbjct: 34  EIACRDYPHSRDQCAKF-------------------------------PFNSTTHDRHCD 62

Query: 741 QCHCYVCDTQAPCMYWGTGVSSTDHCHSTDKEEIWKLQRKYFGQVNKAPSSALDDPANTL 562
           QCHCYVCD+ APC +WGTG++  DHCH+T+K+E W  QRK F ++ K+    +   A  L
Sbjct: 63  QCHCYVCDSLAPCGHWGTGMNIVDHCHATNKDEFWVNQRKSF-RLGKSQQVPIQKHATAL 121

Query: 561 PIAPPVHKSIPALTHLQTLNSVHSQIPAVSNSPTLRSCSSTSNFGVPNIISNRNHQQSGV 382
           P     + S P L      N +      VS   ++ +CSS +N GVPN  S   +Q+S V
Sbjct: 122 PQVSQ-NSSFPLLQP----NPIWQN--QVSRPTSIHACSSRTNVGVPNTASLTRNQRSEV 174

Query: 381 TVSRSRL-PHQVASRSTALAPGSGSIASNIIRRDKDNGAGTLGPRFGSPQVNFKRVGSGA 205
            + R+R  PH V+ +        G+ ++   R+D+ +G G LGP+F S Q  FKR GSG 
Sbjct: 175 DLGRTRFQPHLVSQKP------HGTQSNIXNRKDRGHGFGPLGPQFSSSQPMFKRTGSGR 228

Query: 204 ITLTKLRSGHGSHDKTNHIY 145
             LT  RSG+G  +  NH Y
Sbjct: 229 GALTANRSGYGLPNNINHAY 248


>ref|XP_003541374.1| PREDICTED: uncharacterized protein LOC100781552 [Glycine max]
          Length = 602

 Score =  159 bits (403), Expect = 8e-37
 Identities = 104/326 (31%), Positives = 160/326 (49%), Gaps = 42/326 (12%)
 Frame = -2

Query: 1020 CLILDGDPEKHVQVANDDSGNNSDELLIVSEKGQLACRDYPHPRHLCARFPXXXXXXXXX 841
            C+IL+GDPE  V    +++ N SDELL++ EKGQ+ACRDYPH RHLC +F          
Sbjct: 76   CVILEGDPENSVASVEEEA-NGSDELLVIGEKGQIACRDYPHARHLCGKF---------- 124

Query: 840  XXXXXXXXXXXXXXXXLCARFPFGSNPHERYCDQCHCYVCDTQAPCMYWGTGVSSTDHCH 661
                                 PF S PH+++C QCHCYVCD+ APC+ WGTG+SS+DHCH
Sbjct: 125  ---------------------PFSSTPHKQHCSQCHCYVCDSLAPCLKWGTGISSSDHCH 163

Query: 660  STDKEEIWKLQRKYFGQVNKAPSSALDDPANTLPIAPPVHKSI--PALTHLQ-------- 511
            + ++ E+W++QRK F     +P  A  +   +L    P H  +  P + +L         
Sbjct: 164  A-NETEVWQIQRKNFKLGQSSPLPASTNFGTSLRPGHPHHNELLPPCVNNLSPNSVLPNQ 222

Query: 510  -TLNSVHSQIPAVSN--------SPTLRSCSSTS----------------------NFGV 424
             ++++    IP++S+         PT R  S++S                      N  +
Sbjct: 223  ASISTAVCSIPSLSSIPQTQASRLPTTRFLSASSPNSSVQNQVFRPINTPIMSPATNITM 282

Query: 423  PNIISNRNHQQSGVTVSRSRL-PHQVASRSTALAPGSGSIASNIIRRDKDNGAGTLGPRF 247
            PN  ++   + S  T+ R++  PH V        P  G + S+ I+R++ NG+ +L P+ 
Sbjct: 283  PNGANHGMRRGSRPTLVRNKYQPHSVP------RPALG-VRSHTIQRERGNGSSSLRPKV 335

Query: 246  GSPQVNFKRVGSGAITLTKLRSGHGS 169
              P +  + VGS   T +   + HGS
Sbjct: 336  LRPHMMSRGVGSAGNT-SMANNSHGS 360


>ref|XP_002886273.1| hypothetical protein ARALYDRAFT_319882 [Arabidopsis lyrata subsp.
            lyrata] gi|297332113|gb|EFH62532.1| hypothetical protein
            ARALYDRAFT_319882 [Arabidopsis lyrata subsp. lyrata]
          Length = 446

 Score =  149 bits (377), Expect = 9e-34
 Identities = 94/313 (30%), Positives = 144/313 (46%), Gaps = 12/313 (3%)
 Frame = -2

Query: 1020 CLILDGDPEKHVQVA------------NDDSGNNSDELLIVSEKGQLACRDYPHPRHLCA 877
            C+ILD DP+K  + A            NDD  ++ D++L+V +KG++ACRD+PHPRH CA
Sbjct: 78   CVILDCDPDKSTKTASIDDDDDDKLAKNDDDDDDDDDVLVVGQKGEIACRDFPHPRHSCA 137

Query: 876  RFPXXXXXXXXXXXXXXXXXXXXXXXXXLCARFPFGSNPHERYCDQCHCYVCDTQAPCMY 697
            ++                                F S  HE+YCD CHCYVCD +APC Y
Sbjct: 138  KYA-------------------------------FNSTSHEKYCDMCHCYVCDIRAPCPY 166

Query: 696  WGTGVSSTDHCHSTDKEEIWKLQRKYFGQVNKAPSSALDDPANTLPIAPPVHKSIPALTH 517
            W   VSS DHCH+ DKE+IWK QR+YF +    P+             PP  K  P++  
Sbjct: 167  WCIAVSSIDHCHANDKEKIWKNQREYF-RTGYMPT-------------PPTSKPTPSILR 212

Query: 516  LQTLNSVHSQIPAVSNSPTLRSCSSTSNFGVPNIISNRNHQQSGVTVSRSRLPHQVASRS 337
            +       S+   + N   +R CSS++    P+ +  R+         R  +PH    +S
Sbjct: 213  V-------SKNTLLRNPVEIRRCSSSTRVANPSSVKARHR-------IRQPIPHNQGLQS 258

Query: 336  TALAPGSGSIASNIIRRDKDNGAGTLGPRFGSPQVNFKRVGSGAITLTKLRSGHGSHDKT 157
                  SG + +++I++D+ +   +L  R  S   N       +I  +  +    SH  +
Sbjct: 259  QPAQSLSG-VRNSVIQKDRSSYKFSLRSRVASTAGN-----GSSIRYSNAQVSQSSHHSS 312

Query: 156  NHIYGSQPQRNPD 118
            + +    P  NP+
Sbjct: 313  SLV---APTINPE 322


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