BLASTX nr result
ID: Coptis24_contig00021135
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021135 (246 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267... 118 4e-25 emb|CBI28665.3| unnamed protein product [Vitis vinifera] 118 4e-25 ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|2... 105 3e-21 gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical p... 99 5e-19 ref|NP_001030933.1| SET domain-containing protein [Arabidopsis t... 99 5e-19 >ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera] Length = 561 Score = 118 bits (296), Expect = 4e-25 Identities = 55/82 (67%), Positives = 69/82 (84%) Frame = -1 Query: 246 TEEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITP 67 TEEAK++ QWLQ+N+VELRGC+IK+C NKGFG+FY ND S+G+ LVVPLDLAITP Sbjct: 4 TEEAKLQHFLQWLQLNRVELRGCEIKYCDSNKGFGIFYANDA--SDGIPLVVPLDLAITP 61 Query: 66 MSVLEDATLGPKCRAMFQQGDV 1 M VL+D LGP+CRAMF++G+V Sbjct: 62 MRVLQDPFLGPECRAMFEEGEV 83 >emb|CBI28665.3| unnamed protein product [Vitis vinifera] Length = 565 Score = 118 bits (296), Expect = 4e-25 Identities = 55/82 (67%), Positives = 69/82 (84%) Frame = -1 Query: 246 TEEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITP 67 TEEAK++ QWLQ+N+VELRGC+IK+C NKGFG+FY ND S+G+ LVVPLDLAITP Sbjct: 4 TEEAKLQHFLQWLQLNRVELRGCEIKYCDSNKGFGIFYANDA--SDGIPLVVPLDLAITP 61 Query: 66 MSVLEDATLGPKCRAMFQQGDV 1 M VL+D LGP+CRAMF++G+V Sbjct: 62 MRVLQDPFLGPECRAMFEEGEV 83 >ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|222861544|gb|EEE99086.1| predicted protein [Populus trichocarpa] Length = 551 Score = 105 bits (263), Expect = 3e-21 Identities = 48/70 (68%), Positives = 62/70 (88%) Frame = -1 Query: 210 LQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITPMSVLEDATLGPK 31 +Q+NKVELRGC IK+CG NKGFG+F +NDV S+GV+LVVPLDLAITPM VL+D +GP+ Sbjct: 1 IQVNKVELRGCNIKYCGQNKGFGVFSSNDV--SDGVLLVVPLDLAITPMRVLQDPLIGPE 58 Query: 30 CRAMFQQGDV 1 CR+MF++G+V Sbjct: 59 CRSMFEEGEV 68 >gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical protein gi|6983878 from Oryza Sativa BAC gb|AP001168 [Arabidopsis thaliana] Length = 441 Score = 98.6 bits (244), Expect = 5e-19 Identities = 47/81 (58%), Positives = 58/81 (71%) Frame = -1 Query: 243 EEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITPM 64 EEAK+E WLQ+N ELRGC IK+ KGFG+F + S+ V+LVVPLDLAITPM Sbjct: 6 EEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITPM 65 Query: 63 SVLEDATLGPKCRAMFQQGDV 1 VL+D LGP+C+ MF+QG V Sbjct: 66 RVLQDPLLGPECQKMFEQGQV 86 >ref|NP_001030933.1| SET domain-containing protein [Arabidopsis thaliana] gi|63003834|gb|AAY25446.1| At1g01920 [Arabidopsis thaliana] gi|332189233|gb|AEE27354.1| SET domain-containing protein [Arabidopsis thaliana] Length = 547 Score = 98.6 bits (244), Expect = 5e-19 Identities = 47/81 (58%), Positives = 58/81 (71%) Frame = -1 Query: 243 EEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITPM 64 EEAK+E WLQ+N ELRGC IK+ KGFG+F + S+ V+LVVPLDLAITPM Sbjct: 6 EEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITPM 65 Query: 63 SVLEDATLGPKCRAMFQQGDV 1 VL+D LGP+C+ MF+QG V Sbjct: 66 RVLQDPLLGPECQKMFEQGQV 86