BLASTX nr result

ID: Coptis24_contig00021135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021135
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267...   118   4e-25
emb|CBI28665.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical p...    99   5e-19
ref|NP_001030933.1| SET domain-containing protein [Arabidopsis t...    99   5e-19

>ref|XP_002268533.1| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera]
          Length = 561

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/82 (67%), Positives = 69/82 (84%)
 Frame = -1

Query: 246 TEEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITP 67
           TEEAK++   QWLQ+N+VELRGC+IK+C  NKGFG+FY ND   S+G+ LVVPLDLAITP
Sbjct: 4   TEEAKLQHFLQWLQLNRVELRGCEIKYCDSNKGFGIFYANDA--SDGIPLVVPLDLAITP 61

Query: 66  MSVLEDATLGPKCRAMFQQGDV 1
           M VL+D  LGP+CRAMF++G+V
Sbjct: 62  MRVLQDPFLGPECRAMFEEGEV 83


>emb|CBI28665.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/82 (67%), Positives = 69/82 (84%)
 Frame = -1

Query: 246 TEEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITP 67
           TEEAK++   QWLQ+N+VELRGC+IK+C  NKGFG+FY ND   S+G+ LVVPLDLAITP
Sbjct: 4   TEEAKLQHFLQWLQLNRVELRGCEIKYCDSNKGFGIFYANDA--SDGIPLVVPLDLAITP 61

Query: 66  MSVLEDATLGPKCRAMFQQGDV 1
           M VL+D  LGP+CRAMF++G+V
Sbjct: 62  MRVLQDPFLGPECRAMFEEGEV 83


>ref|XP_002320771.1| predicted protein [Populus trichocarpa] gi|222861544|gb|EEE99086.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/70 (68%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 LQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITPMSVLEDATLGPK 31
           +Q+NKVELRGC IK+CG NKGFG+F +NDV  S+GV+LVVPLDLAITPM VL+D  +GP+
Sbjct: 1   IQVNKVELRGCNIKYCGQNKGFGVFSSNDV--SDGVLLVVPLDLAITPMRVLQDPLIGPE 58

Query: 30  CRAMFQQGDV 1
           CR+MF++G+V
Sbjct: 59  CRSMFEEGEV 68


>gb|AAF76470.1|AC020622_4 Contains similarity to a hypothetical protein gi|6983878 from Oryza
           Sativa BAC gb|AP001168 [Arabidopsis thaliana]
          Length = 441

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = -1

Query: 243 EEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITPM 64
           EEAK+E    WLQ+N  ELRGC IK+    KGFG+F +     S+ V+LVVPLDLAITPM
Sbjct: 6   EEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITPM 65

Query: 63  SVLEDATLGPKCRAMFQQGDV 1
            VL+D  LGP+C+ MF+QG V
Sbjct: 66  RVLQDPLLGPECQKMFEQGQV 86


>ref|NP_001030933.1| SET domain-containing protein [Arabidopsis thaliana]
           gi|63003834|gb|AAY25446.1| At1g01920 [Arabidopsis
           thaliana] gi|332189233|gb|AEE27354.1| SET
           domain-containing protein [Arabidopsis thaliana]
          Length = 547

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = -1

Query: 243 EEAKVETLRQWLQINKVELRGCKIKHCGPNKGFGLFYNNDVNQSNGVMLVVPLDLAITPM 64
           EEAK+E    WLQ+N  ELRGC IK+    KGFG+F +     S+ V+LVVPLDLAITPM
Sbjct: 6   EEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDLAITPM 65

Query: 63  SVLEDATLGPKCRAMFQQGDV 1
            VL+D  LGP+C+ MF+QG V
Sbjct: 66  RVLQDPLLGPECQKMFEQGQV 86


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