BLASTX nr result

ID: Coptis24_contig00021134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021134
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618133.1| Guanine nucleotide-exchange protein-like pro...   172   3e-41
ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nuc...   171   7e-41
ref|XP_002328143.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-...   169   2e-40
ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nuc...   169   2e-40

>ref|XP_003618133.1| Guanine nucleotide-exchange protein-like protein [Medicago
           truncatula] gi|355519468|gb|AET01092.1| Guanine
           nucleotide-exchange protein-like protein [Medicago
           truncatula]
          Length = 697

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/133 (63%), Positives = 107/133 (80%)
 Frame = -1

Query: 400 LLGFSRSDAEFVLQPLILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIESNASLIEFRLI 221
           L+G   SDAE+VLQPL LA+DS+  K+VEPALDC FKL SLGL+RGEI +  S + F +I
Sbjct: 62  LVGIPSSDAEYVLQPLFLALDSAYAKVVEPALDCTFKLLSLGLVRGEIIN--SHLFFNII 119

Query: 220 DSVCKCGGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQIC 41
           D++CK GGL +E IEL +L++L+S+VRSP V IR  CL QI++TCYNVY G  +GTNQIC
Sbjct: 120 DAICKSGGLGEEAIELGVLRVLLSAVRSPCVLIRGDCLVQIVRTCYNVYLGGVNGTNQIC 179

Query: 40  AKAVLAQILTIVF 2
           AK+VLAQI+TIVF
Sbjct: 180 AKSVLAQIVTIVF 192


>ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange
           protein 1-like [Glycine max]
          Length = 1714

 Score =  171 bits (432), Expect = 7e-41
 Identities = 85/131 (64%), Positives = 106/131 (80%)
 Frame = -1

Query: 394 GFSRSDAEFVLQPLILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIESNASLIEFRLIDS 215
           G S SDA+ VLQPL LA+DS+  K+VEPAL+C FKLFSLGL+ GEI  N S I F +ID+
Sbjct: 67  GLSSSDADCVLQPLFLALDSAYPKVVEPALECTFKLFSLGLVCGEI--NRSGIVFNMIDA 124

Query: 214 VCKCGGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQICAK 35
           +CK GGL +E IEL +L++L+S+VRSP + IRA CL QI++TCYNVY G  +GTNQICAK
Sbjct: 125 ICKSGGLGEEAIELGVLRVLLSAVRSPCILIRADCLIQIVRTCYNVYLGGVNGTNQICAK 184

Query: 34  AVLAQILTIVF 2
           +VLAQI+TIVF
Sbjct: 185 SVLAQIMTIVF 195


>ref|XP_002328143.1| predicted protein [Populus trichocarpa] gi|222837658|gb|EEE76023.1|
           predicted protein [Populus trichocarpa]
          Length = 1638

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/134 (59%), Positives = 112/134 (83%), Gaps = 1/134 (0%)
 Frame = -1

Query: 400 LLGFSRSDAEFVLQPLILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIESNA-SLIEFRL 224
           L G S SDAEFVL P++LA+DS+ +K+V+PAL+CLFKLFS GLIRGEI++ + ++I F++
Sbjct: 59  LFGLSPSDAEFVLHPILLALDSAYVKVVDPALECLFKLFSSGLIRGEIDNGSKNVIIFKI 118

Query: 223 IDSVCKCGGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQSGTNQI 44
           I+SVCK  G+ DE +EL++L++L+S+VRSP V IR +CL  +++TCYNVY G  +GTNQI
Sbjct: 119 IESVCKVCGIGDEAVELSVLRVLLSAVRSPCVLIRGECLVHVVRTCYNVYLGGLTGTNQI 178

Query: 43  CAKAVLAQILTIVF 2
           CAK+VLAQ++ IVF
Sbjct: 179 CAKSVLAQVMLIVF 192


>ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine
           nucleotide-exchange protein 2-like [Cucumis sativus]
          Length = 1711

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/140 (58%), Positives = 108/140 (77%), Gaps = 7/140 (5%)
 Frame = -1

Query: 400 LLGFSRSDAEFVLQPLILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIE-------SNAS 242
           L G S +DA+FVLQPL+LA+D++ +K+ EPAL+C+FKLFS GL RGEIE       SNAS
Sbjct: 62  LAGLSPADADFVLQPLLLALDAAYVKVAEPALECVFKLFSRGLFRGEIERPDGDANSNAS 121

Query: 241 LIEFRLIDSVCKCGGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQ 62
            I +++++SVCK GGL DE IEL +L++L+S+VR P V IR  CL  +++TCYNVY G  
Sbjct: 122 SIVYKIVESVCKSGGLGDEGIELTVLRVLLSAVRCPCVLIRGDCLVNVVRTCYNVYLGGL 181

Query: 61  SGTNQICAKAVLAQILTIVF 2
           SGTNQICAK+VL Q++ IVF
Sbjct: 182 SGTNQICAKSVLGQVMVIVF 201


>ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange
           protein 2-like [Cucumis sativus]
           gi|449473000|ref|XP_004153755.1| PREDICTED: brefeldin
           A-inhibited guanine nucleotide-exchange protein 2-like
           [Cucumis sativus]
          Length = 1711

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/140 (58%), Positives = 108/140 (77%), Gaps = 7/140 (5%)
 Frame = -1

Query: 400 LLGFSRSDAEFVLQPLILAIDSSSLKIVEPALDCLFKLFSLGLIRGEIE-------SNAS 242
           L G S +DA+FVLQPL+LA+D++ +K+ EPAL+C+FKLFS GL RGEIE       SNAS
Sbjct: 62  LAGLSPADADFVLQPLLLALDAAYVKVAEPALECVFKLFSRGLFRGEIERPDGDANSNAS 121

Query: 241 LIEFRLIDSVCKCGGLNDEVIELALLKLLISSVRSPSVFIRAQCLNQIIKTCYNVYFGSQ 62
            I +++++SVCK GGL DE IEL +L++L+S+VR P V IR  CL  +++TCYNVY G  
Sbjct: 122 SIVYKIVESVCKSGGLGDEGIELTVLRVLLSAVRCPCVLIRGDCLVNVVRTCYNVYLGGL 181

Query: 61  SGTNQICAKAVLAQILTIVF 2
           SGTNQICAK+VL Q++ IVF
Sbjct: 182 SGTNQICAKSVLGQVMVIVF 201


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