BLASTX nr result
ID: Coptis24_contig00021121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021121
(1197 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycin... 337 2e-93
ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane prot... 335 9e-93
gb|AFK46984.1| unknown [Medicago truncatula] 329 2e-90
ref|XP_002517154.1| conserved hypothetical protein [Ricinus comm... 325 4e-90
ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane prot... 335 1e-89
>ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycine max]
gi|255646580|gb|ACU23764.1| unknown [Glycine max]
Length = 274
Score = 337 bits (864), Expect(2) = 2e-93
Identities = 167/251 (66%), Positives = 202/251 (80%), Gaps = 1/251 (0%)
Frame = +1
Query: 19 MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGRWGPLVLAVAYIPL 198
M+++W + LRI ILLL+L + +ACFTLPI++ ++DFL W+D +LG WGPLVLAVAYIPL
Sbjct: 1 MSLSWASALRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60
Query: 199 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSTAAFLLGRTIARSYVISKLKDYPKF 378
TVLAVPAS+ F+ADSIGAT+G+ AAFLLGRTI RS+V+S+LKDYP+F
Sbjct: 61 TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120
Query: 379 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 558
++V+IAI+RSGFKI LLRLVPLLPFNMLNY+LSVTP+ I EY+LASWLGMMPITL LVY
Sbjct: 121 RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180
Query: 559 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDI-G 735
VGTTLKDLSDVTHGWGE S TRW LM+CVTKVAKA+L+KALAE+ DI G
Sbjct: 181 VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTKVAKAALDKALAENEDIDG 240
Query: 736 VLAAPHLPIVA 768
+ ++P LPIVA
Sbjct: 241 ITSSPDLPIVA 251
Score = 33.1 bits (74), Expect(2) = 2e-93
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 860 SSDLRQPLIIKMNPPEDTHEK 922
S+DL QPLIIK++ ED+HEK
Sbjct: 254 SADLNQPLIIKIDSSEDSHEK 274
>ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like
[Glycine max]
Length = 274
Score = 335 bits (859), Expect(2) = 9e-93
Identities = 166/251 (66%), Positives = 201/251 (80%), Gaps = 1/251 (0%)
Frame = +1
Query: 19 MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGRWGPLVLAVAYIPL 198
M+ +W + LRI ILLL+L + +ACFTLPI++ ++DFL W+D +LG WGPLVLAVAYIPL
Sbjct: 1 MSFSWSSTLRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60
Query: 199 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSTAAFLLGRTIARSYVISKLKDYPKF 378
TVLAVPAS+ F+ADSIGAT+G+ AAFLLGRTI RS+V+S+LKDYP+F
Sbjct: 61 TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQF 120
Query: 379 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 558
++V+IAI+RSGFKI LLRLVPLLPFNMLNY+LSVTP+ I EY+LASWLGMMPITL LVY
Sbjct: 121 RSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180
Query: 559 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDI-G 735
VGTTLKDLSDVTHGWGE S TRW LM+CVT+VAKA+L+KALAE+ DI G
Sbjct: 181 VGTTLKDLSDVTHGWGEFSKTRWAFIILGLVISVVLMICVTRVAKAALDKALAENEDIDG 240
Query: 736 VLAAPHLPIVA 768
+ ++P LPIVA
Sbjct: 241 ITSSPDLPIVA 251
Score = 33.1 bits (74), Expect(2) = 9e-93
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 860 SSDLRQPLIIKMNPPEDTHEK 922
S+DL QPLIIK++ ED+HEK
Sbjct: 254 SADLNQPLIIKIDSSEDSHEK 274
>gb|AFK46984.1| unknown [Medicago truncatula]
Length = 274
Score = 329 bits (843), Expect(2) = 2e-90
Identities = 162/251 (64%), Positives = 197/251 (78%), Gaps = 1/251 (0%)
Frame = +1
Query: 19 MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGRWGPLVLAVAYIPL 198
M +W + RI +LLL+L + +ACFTLPI++ ++DFL W+D++LG WGPLVLAVAYIPL
Sbjct: 1 MAFSWASAFRITLLLLLLLAVIVACFTLPIEKIMKDFLLWVDRDLGAWGPLVLAVAYIPL 60
Query: 199 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSTAAFLLGRTIARSYVISKLKDYPKF 378
TVLAVPAS+ F+ADSIGAT+G+ AAFLLGRTI R +V+S+LKDYPKF
Sbjct: 61 TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPKF 120
Query: 379 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 558
++V+IAI+RSGFKI LLRLVPLLPFNMLNY+LSVTP+ + EY+LASWLGMMPITL LVY
Sbjct: 121 KSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMPITLALVY 180
Query: 559 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDI-G 735
VGTTLKDLSDVTHGW E S +RW LM+CVTKVAK +L+KALAE+ DI G
Sbjct: 181 VGTTLKDLSDVTHGWNEFSKSRWAFIIIGLIVSVVLMICVTKVAKFALDKALAENEDIDG 240
Query: 736 VLAAPHLPIVA 768
V ++P LPIVA
Sbjct: 241 VTSSPELPIVA 251
Score = 31.2 bits (69), Expect(2) = 2e-90
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 863 SDLRQPLIIKMNPPEDTHEK 922
SDL QPLIIK++ ED HEK
Sbjct: 255 SDLNQPLIIKIDFTEDNHEK 274
>ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis]
gi|223543789|gb|EEF45317.1| conserved hypothetical
protein [Ricinus communis]
Length = 302
Score = 325 bits (833), Expect(2) = 4e-90
Identities = 160/249 (64%), Positives = 197/249 (79%), Gaps = 1/249 (0%)
Frame = +1
Query: 22 TITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGRWGPLVLAVAYIPLT 201
++TWG+ LRI +L L++ + +ACFTLP+++ L+DFL W++++LG WGPLVLAVAYIPLT
Sbjct: 30 SMTWGSALRITLLFLLIAAVVVACFTLPVEKILKDFLLWVEQDLGPWGPLVLAVAYIPLT 89
Query: 202 VLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSTAAFLLGRTIARSYVISKLKDYPKFQ 381
VLAVPAS+ F+ADSIGAT+G+ AAFLLGRTI RS+VISKLKDYP+F+
Sbjct: 90 VLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVISKLKDYPQFR 149
Query: 382 AVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVYV 561
+V+IAIQRSGFKI LLRLVPLLPFNMLNY+LSVTP+ + EY+LASW+GMMPITL LVYV
Sbjct: 150 SVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLGEYMLASWIGMMPITLALVYV 209
Query: 562 GTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDIG-V 738
GTTLKDLSDVTHGW + S TRW LM CVT+VAK++L KALAE+ DI +
Sbjct: 210 GTTLKDLSDVTHGWSKFSTTRWVCIVLGFVVSVVLMFCVTRVAKSALAKALAENEDIDTI 269
Query: 739 LAAPHLPIV 765
L+ P LPIV
Sbjct: 270 LSTPQLPIV 278
Score = 34.3 bits (77), Expect(2) = 4e-90
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 860 SSDLRQPLIIKMNPPEDTHEK 922
S DL QPLIIK++ PED HEK
Sbjct: 282 SVDLNQPLIIKIDAPEDDHEK 302
>ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
vinifera] gi|297736982|emb|CBI26183.3| unnamed protein
product [Vitis vinifera]
Length = 274
Score = 335 bits (860), Expect = 1e-89
Identities = 169/251 (67%), Positives = 199/251 (79%), Gaps = 1/251 (0%)
Frame = +1
Query: 19 MTITWGTVLRIFILLLVLTVIGIACFTLPIQETLRDFLYWIDKNLGRWGPLVLAVAYIPL 198
M +W + LRI LLL++ I +ACFTLP+++ L+DFL WI+++LG WGPL LAVAYIPL
Sbjct: 1 MAFSWLSFLRITFLLLLIAAIAVACFTLPVEKILKDFLLWIEQDLGPWGPLALAVAYIPL 60
Query: 199 TVLAVPASIXXXXXXXXXXXXXXFIADSIGATIGSTAAFLLGRTIARSYVISKLKDYPKF 378
TVLAVPAS+ F+ADSIGAT+G+ AAFLLGRTI RSYVISKLKDYP+F
Sbjct: 61 TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSYVISKLKDYPQF 120
Query: 379 QAVSIAIQRSGFKIAFLLRLVPLLPFNMLNYMLSVTPIGITEYILASWLGMMPITLVLVY 558
+AV+IAIQRSGFKI LLRLVPLLPFNMLNY+LSVTP+ + EY+LASWLGMMPITL LVY
Sbjct: 121 RAVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPVWEYMLASWLGMMPITLALVY 180
Query: 559 VGTTLKDLSDVTHGWGEISPTRWXXXXXXXXXXXXLMVCVTKVAKASLEKALAESPDI-G 735
+GTTLKDLSDVTHGW E S +RW LMVCVTKVAKA+LEKALAE+ DI G
Sbjct: 181 IGTTLKDLSDVTHGWHEFSTSRWIFIGLGLVISVILMVCVTKVAKAALEKALAENEDIDG 240
Query: 736 VLAAPHLPIVA 768
++AAP LPIV+
Sbjct: 241 IVAAPQLPIVS 251