BLASTX nr result
ID: Coptis24_contig00021117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021117
(409 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513424.1| conserved hypothetical protein [Ricinus comm... 65 3e-11
ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]... 62 9e-10
sp|P93820.3|Y1439_ARATH RecName: Full=BTB/POZ domain-containing ... 60 3e-09
gb|AAB70453.1| F19P19.16 [Arabidopsis thaliana] 60 3e-09
ref|NP_171934.1| BTB/POZ domain-containing protein [Arabidopsis ... 60 3e-09
>ref|XP_002513424.1| conserved hypothetical protein [Ricinus communis]
gi|223547332|gb|EEF48827.1| conserved hypothetical
protein [Ricinus communis]
Length = 1016
Score = 65.1 bits (157), Expect(2) = 3e-11
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Frame = +1
Query: 1 KDSIADIVLPLIGITKTRNEALLGMTAEVTVTFVDVLANCIP-------LHRFPTCYXXX 159
KDSI DIV L+ I + +++A+L +TA + +++L N + + P+
Sbjct: 79 KDSIMDIVGALVWILQNKSKAVLTITANLVEKLINILPNTLLQSYYLDFIRLLPSLLSSH 138
Query: 160 XXXXXXXXXX----------------VWEILKESKAVECIVYCLQGFIDGSKPFECFQEM 291
VW+IL E++ V IV C++ F D + ECFQEM
Sbjct: 139 QVEVSRSCTTALNMIFLNLSAKKEKQVWDILIETETVSRIVGCIKEFSDCAMSIECFQEM 198
Query: 292 ASLLETVLLHWPPSR 336
+SLL T+L WPPSR
Sbjct: 199 SSLLGTILHRWPPSR 213
Score = 27.7 bits (60), Expect(2) = 3e-11
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 371 ALCGDGAKKLLDN 409
ALCG+GAKKLL+N
Sbjct: 249 ALCGNGAKKLLEN 261
>ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]
gi|297338056|gb|EFH68473.1| F19P19.16 [Arabidopsis
lyrata subsp. lyrata]
Length = 978
Score = 61.6 bits (148), Expect(2) = 9e-10
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Frame = +1
Query: 1 KDSIADIVLPLIGITKTRNEALLGMTAEVTVTFV-------------DVLANCIPL---H 132
KDSI+DI L+ I +N A++G+ A V + + D++ + PL
Sbjct: 71 KDSISDIAGALVFILGCKNRAVVGLAANVVIRLIRIVPPSILQSYSLDLVESLSPLLSCQ 130
Query: 133 RFPTCYXXXXXXXXXXXXX-------VWEILKESKAVECIVYCLQGFIDGSKPFECFQEM 291
+F VW+IL+E+K V +V LQ F++G+ E FQEM
Sbjct: 131 QFDVSLPCAVALNAILVNVRETKEKEVWKILEEAKTVVSVVGNLQNFLEGNMSVEWFQEM 190
Query: 292 ASLLETVLLHWPPSR 336
A LL T++L WP SR
Sbjct: 191 ALLLSTIMLKWPRSR 205
Score = 26.2 bits (56), Expect(2) = 9e-10
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 365 SYALCGDGAKKLLDN 409
S ALCG GA +LLDN
Sbjct: 239 SLALCGHGANELLDN 253
>sp|P93820.3|Y1439_ARATH RecName: Full=BTB/POZ domain-containing protein At1g04390
Length = 1002
Score = 59.7 bits (143), Expect(2) = 3e-09
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Frame = +1
Query: 1 KDSIADIVLPLIGITKTRNEALLGMTAEVTVTFVDVLANCIPLHRFP------------- 141
KDSI+DI L+ I ++N A++G+ A V + + ++ I LH +
Sbjct: 71 KDSISDIAGALVFILGSKNRAVVGLAANVVIRLIRIVPPSI-LHSYSLDLVESLSPLLCC 129
Query: 142 -----------TCYXXXXXXXXXXXXXVWEILKESKAVECIVYCLQGFIDGSKPFECFQE 288
VW+IL++ K V +V LQ F +GS E FQE
Sbjct: 130 QQFDVSLPCAVALNAILVNVRETKEKEVWKILEDEKTVVSVVGNLQIFSEGSMSVEWFQE 189
Query: 289 MASLLETVLLHWPPSR 336
MA LL T++L WP SR
Sbjct: 190 MALLLSTIMLKWPQSR 205
Score = 26.2 bits (56), Expect(2) = 3e-09
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 365 SYALCGDGAKKLLDN 409
S ALCG GA +LLDN
Sbjct: 239 SLALCGHGANELLDN 253
>gb|AAB70453.1| F19P19.16 [Arabidopsis thaliana]
Length = 979
Score = 59.7 bits (143), Expect(2) = 3e-09
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Frame = +1
Query: 1 KDSIADIVLPLIGITKTRNEALLGMTAEVTVTFVDVLANCIPLHRFP------------- 141
KDSI+DI L+ I ++N A++G+ A V + + ++ I LH +
Sbjct: 71 KDSISDIAGALVFILGSKNRAVVGLAANVVIRLIRIVPPSI-LHSYSLDLVESLSPLLCC 129
Query: 142 -----------TCYXXXXXXXXXXXXXVWEILKESKAVECIVYCLQGFIDGSKPFECFQE 288
VW+IL++ K V +V LQ F +GS E FQE
Sbjct: 130 QQFDVSLPCAVALNAILVNVRETKEKEVWKILEDEKTVVSVVGNLQIFSEGSMSVEWFQE 189
Query: 289 MASLLETVLLHWPPSR 336
MA LL T++L WP SR
Sbjct: 190 MALLLSTIMLKWPQSR 205
Score = 26.2 bits (56), Expect(2) = 3e-09
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 365 SYALCGDGAKKLLDN 409
S ALCG GA +LLDN
Sbjct: 239 SLALCGHGANELLDN 253
>ref|NP_171934.1| BTB/POZ domain-containing protein [Arabidopsis thaliana]
gi|332189570|gb|AEE27691.1| BTB/POZ domain-containing
protein [Arabidopsis thaliana]
Length = 849
Score = 59.7 bits (143), Expect(2) = 3e-09
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Frame = +1
Query: 1 KDSIADIVLPLIGITKTRNEALLGMTAEVTVTFVDVLANCIPLHRFP------------- 141
KDSI+DI L+ I ++N A++G+ A V + + ++ I LH +
Sbjct: 71 KDSISDIAGALVFILGSKNRAVVGLAANVVIRLIRIVPPSI-LHSYSLDLVESLSPLLCC 129
Query: 142 -----------TCYXXXXXXXXXXXXXVWEILKESKAVECIVYCLQGFIDGSKPFECFQE 288
VW+IL++ K V +V LQ F +GS E FQE
Sbjct: 130 QQFDVSLPCAVALNAILVNVRETKEKEVWKILEDEKTVVSVVGNLQIFSEGSMSVEWFQE 189
Query: 289 MASLLETVLLHWPPSR 336
MA LL T++L WP SR
Sbjct: 190 MALLLSTIMLKWPQSR 205
Score = 26.2 bits (56), Expect(2) = 3e-09
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 365 SYALCGDGAKKLLDN 409
S ALCG GA +LLDN
Sbjct: 239 SLALCGHGANELLDN 253