BLASTX nr result
ID: Coptis24_contig00021108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021108 (461 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31112.3| unnamed protein product [Vitis vinifera] 113 1e-27 ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 105 2e-27 emb|CBI40707.3| unnamed protein product [Vitis vinifera] 115 5e-24 emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera] 88 2e-16 ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ... 88 8e-16 >emb|CBI31112.3| unnamed protein product [Vitis vinifera] Length = 2099 Score = 113 bits (282), Expect(2) = 1e-27 Identities = 54/55 (98%), Positives = 54/55 (98%) Frame = -3 Query: 204 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRIGQKTIQKAKAHPA 40 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK GGYRIGQKTIQKAKAHPA Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPA 1829 Score = 34.7 bits (78), Expect(2) = 1e-27 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = -2 Query: 409 RYEAWETMQEVYDTTGNLKEWRQNSQMDQR 320 R + + ++VYDTTGNLKEWR + + +R Sbjct: 1753 RKKFFRLKRQVYDTTGNLKEWRLRASVGKR 1782 >ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] gi|355477385|gb|AES58588.1| Ribosomal protein S10 [Medicago truncatula] Length = 1152 Score = 105 bits (261), Expect(2) = 2e-27 Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 4/84 (4%) Frame = -3 Query: 249 FPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQKTGG--YRI 79 FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQK G + Sbjct: 957 FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQKREGTTLTL 1016 Query: 78 GQKTIQKAKAHPA*RKCAPA-PRG 10 G++ +K + PA PRG Sbjct: 1017 GRRRSKKRRLTLLKLASKPARPRG 1040 Score = 42.4 bits (98), Expect(2) = 2e-27 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = -2 Query: 406 YEAWETMQEVYDTTGNLKEWRQN 338 Y AWE ++EV DTTGNLKEWRQ+ Sbjct: 934 YAAWERIKEVSDTTGNLKEWRQS 956 >emb|CBI40707.3| unnamed protein product [Vitis vinifera] Length = 574 Score = 115 bits (287), Expect = 5e-24 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = -3 Query: 255 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRI 79 VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTGGY I Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYHI 573 >emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera] Length = 267 Score = 87.8 bits (216), Expect(2) = 2e-16 Identities = 50/87 (57%), Positives = 57/87 (65%), Gaps = 11/87 (12%) Frame = +2 Query: 104 FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGK 250 +P+GL S VDPMAARKGDLVLYSGDLFPTEARKLPSC + KG+ Sbjct: 94 YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGE 153 Query: 251 PTHPSAPLVDAVRFYEASKHSSLALIH 331 + +VRFYEASKHSSLALI+ Sbjct: 154 AYSSISSSRRSVRFYEASKHSSLALIN 180 Score = 22.3 bits (46), Expect(2) = 2e-16 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +3 Query: 336 EFCRHSLR 359 EFCRHSLR Sbjct: 182 EFCRHSLR 189 >ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula] gi|355477358|gb|AES58561.1| hypothetical protein MTR_1g005810 [Medicago truncatula] Length = 146 Score = 87.8 bits (216), Expect = 8e-16 Identities = 41/48 (85%), Positives = 42/48 (87%) Frame = +2 Query: 149 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHPSAPLVDAVRF 292 +KGDLVLYSG FPTEARK PSCPRSHSVNRKGKPTHPSAPLVD F Sbjct: 89 KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGF 136