BLASTX nr result

ID: Coptis24_contig00021085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021085
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotr...   207   8e-52
emb|CBI36739.3| unnamed protein product [Vitis vinifera]              207   8e-52
ref|XP_002512340.1| conserved hypothetical protein [Ricinus comm...   207   1e-51
ref|XP_003626320.1| Protein FAM86A [Medicago truncatula] gi|3555...   195   4e-48
gb|AFK35310.1| unknown [Medicago truncatula]                          193   2e-47

>ref|XP_002284915.2| PREDICTED: branched-chain-amino-acid aminotransferase-like protein
           2 [Vitis vinifera]
          Length = 960

 Score =  207 bits (528), Expect = 8e-52
 Identities = 104/174 (59%), Positives = 131/174 (75%)
 Frame = +1

Query: 64  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNHCINKSVSRENGPSGLYVKNFLK 243
           +L+SAF AMEPT  LISL++ CGGG IT+ VQ  I ++CI+K V + + P   Y KNFLK
Sbjct: 15  HLLSAFLAMEPTHCLISLARVCGGGLITEGVQRFIWDNCISK-VEKSHVP---YSKNFLK 70

Query: 244 KVIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSSCPK 423
           K+I  +E +  ++LD+LYEQ+A Y+   KDD L K N+RV K  SFLFP  CF + SCPK
Sbjct: 71  KLINEIESAHGDILDELYEQYASYMILLKDDRLVKENSRVLKCISFLFPPGCFGVPSCPK 130

Query: 424 SLKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSCLEVGCGVG 585
           S++L VPL CSLNML+GDTGC IWPSS +LSEF+LS+PEIF+ KSC EVG GVG
Sbjct: 131 SMQLAVPLHCSLNMLEGDTGCSIWPSSLFLSEFILSHPEIFSNKSCFEVGSGVG 184


>emb|CBI36739.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score =  207 bits (528), Expect = 8e-52
 Identities = 104/174 (59%), Positives = 131/174 (75%)
 Frame = +1

Query: 64  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNHCINKSVSRENGPSGLYVKNFLK 243
           +L+SAF AMEPT  LISL++ CGGG IT+ VQ  I ++CI+K V + + P   Y KNFLK
Sbjct: 15  HLLSAFLAMEPTHCLISLARVCGGGLITEGVQRFIWDNCISK-VEKSHVP---YSKNFLK 70

Query: 244 KVIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSSCPK 423
           K+I  +E +  ++LD+LYEQ+A Y+   KDD L K N+RV K  SFLFP  CF + SCPK
Sbjct: 71  KLINEIESAHGDILDELYEQYASYMILLKDDRLVKENSRVLKCISFLFPPGCFGVPSCPK 130

Query: 424 SLKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSCLEVGCGVG 585
           S++L VPL CSLNML+GDTGC IWPSS +LSEF+LS+PEIF+ KSC EVG GVG
Sbjct: 131 SMQLAVPLHCSLNMLEGDTGCSIWPSSLFLSEFILSHPEIFSNKSCFEVGSGVG 184


>ref|XP_002512340.1| conserved hypothetical protein [Ricinus communis]
           gi|223548301|gb|EEF49792.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 411

 Score =  207 bits (527), Expect = 1e-51
 Identities = 104/175 (59%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 64  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNHCINKSVSRENGPSGLYVKNFLK 243
           +LISAF AM+PT  LISL++ CGGG +T+ VQ  I   CI+K+  + N P   Y+KNF+K
Sbjct: 15  HLISAFLAMDPTGTLISLARACGGGLVTETVQRFIWEFCISKTTDKGNTP---YLKNFVK 71

Query: 244 KVIVYVEESSDE-VLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSSCP 420
           K+I  +E S    VLD+LYEQ+ YY+TS KDDI      RVCK  SFLFPD C     CP
Sbjct: 72  KLICEIESSHGTIVLDELYEQYGYYVTSLKDDI---SGARVCKCISFLFPDGCSSSPICP 128

Query: 421 KSLKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSCLEVGCGVG 585
           KS KL VPL CSLNML+GDTGC +WPSS YLSEFVLS+P+IF+ K+C EVG GVG
Sbjct: 129 KSRKLVVPLHCSLNMLEGDTGCSVWPSSLYLSEFVLSFPDIFSNKTCFEVGSGVG 183


>ref|XP_003626320.1| Protein FAM86A [Medicago truncatula] gi|355501335|gb|AES82538.1|
           Protein FAM86A [Medicago truncatula]
          Length = 397

 Score =  195 bits (496), Expect = 4e-48
 Identities = 98/177 (55%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
 Frame = +1

Query: 64  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNHCINKSVSRENGPSGLY---VKN 234
           YL+SA  AMEP+  LIS +K CG GSIT+ VQ  IL+HC++        PS  Y   +KN
Sbjct: 12  YLLSAILAMEPSYCLISHAKACGEGSITEQVQQFILDHCLST-------PSDFYAPYLKN 64

Query: 235 FLKKVIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSS 414
           FLKK+I  VE     VLD  Y+ +A YITSFKDD L K ++R+CK  SFLFPD C EL +
Sbjct: 65  FLKKLITQVESDHGSVLDKFYQLYAQYITSFKDDSLDKRDSRICKRISFLFPDGCSELQT 124

Query: 415 CPKSLKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSCLEVGCGVG 585
           C  S  L  PL+CS+NML+GDTGC IWPSS +LSE +LS+PE+F+ K C E+G GVG
Sbjct: 125 CSHSSVLNFPLQCSINMLEGDTGCSIWPSSLFLSELILSHPELFSNKVCFEIGSGVG 181


>gb|AFK35310.1| unknown [Medicago truncatula]
          Length = 219

 Score =  193 bits (490), Expect = 2e-47
 Identities = 97/177 (54%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
 Frame = +1

Query: 64  YLISAFFAMEPTPFLISLSKECGGGSITKPVQTLILNHCINKSVSRENGPSGLY---VKN 234
           YL+SA  AMEP+  LIS +K CG GSIT+ VQ  IL+HC++        PS  Y   +KN
Sbjct: 12  YLLSAILAMEPSYCLISHAKACGEGSITEQVQQFILDHCLST-------PSDFYAPYLKN 64

Query: 235 FLKKVIVYVEESSDEVLDDLYEQFAYYITSFKDDILAKGNTRVCKTFSFLFPDDCFELSS 414
           FLKK+I  VE     VLD  Y+ +A YITSFKDD L K ++R+CK  SFLFPD C EL +
Sbjct: 65  FLKKLITQVESDHGSVLDKFYQLYAQYITSFKDDSLDKRDSRICKRISFLFPDGCSELQT 124

Query: 415 CPKSLKLEVPLRCSLNMLDGDTGCWIWPSSFYLSEFVLSYPEIFTGKSCLEVGCGVG 585
           C  S  L  P +CS+NML+GDTGC IWPSS +LSE +LS+PE+F+ K C E+G GVG
Sbjct: 125 CSHSSVLNFPSQCSINMLEGDTGCSIWPSSLFLSELILSHPELFSNKVCFEIGSGVG 181


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