BLASTX nr result

ID: Coptis24_contig00021084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021084
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625405.1| Pleiotropic drug resistance protein [Medicag...   142   2e-32
ref|XP_004164072.1| PREDICTED: ABC transporter G family member 3...   141   5e-32
ref|XP_004143306.1| PREDICTED: ABC transporter G family member 3...   141   5e-32
ref|XP_002527331.1| ATP-binding cassette transporter, putative [...   140   1e-31
ref|XP_002529079.1| ATP-binding cassette transporter, putative [...   140   1e-31

>ref|XP_003625405.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500420|gb|AES81623.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1404

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/77 (84%), Positives = 74/77 (96%)
 Frame = +2

Query: 2    ETFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVELNPIR 181
            ETFAR+SGYCEQNDIHSPHVTVYESL+YSAWLRL SE+ KET+KMF++EVMELVELNP+R
Sbjct: 885  ETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPSEIEKETRKMFIEEVMELVELNPLR 944

Query: 182  DALVGLPGIDGLSTEQR 232
            DA+VGLPG+ GLSTEQR
Sbjct: 945  DAIVGLPGVSGLSTEQR 961



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 402  EPTSGLDARAAAIVMRTIRNTVDTGRTVVCTIHQPSIDIFE 524
            EPTSGLDARAA+IVMR +RN VDTGRT+VCTIHQPSI IFE
Sbjct: 981  EPTSGLDARAASIVMRAVRNIVDTGRTIVCTIHQPSIHIFE 1021


>ref|XP_004164072.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus]
          Length = 1455

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/77 (87%), Positives = 74/77 (96%)
 Frame = +2

Query: 2    ETFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVELNPIR 181
            ETFARVSGYCEQNDIHSPH+TVYES++YSAWLRL S VN ET+KMFV+EVMELVELNP+R
Sbjct: 935  ETFARVSGYCEQNDIHSPHLTVYESVLYSAWLRLPSSVNTETRKMFVEEVMELVELNPLR 994

Query: 182  DALVGLPGIDGLSTEQR 232
            +ALVGLPGIDGLSTEQR
Sbjct: 995  EALVGLPGIDGLSTEQR 1011



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 402  EPTSGLDARAAAIVMRTIRNTVDTGRTVVCTIHQPSIDIFE 524
            EPTSGLDARAAAIVMRT+RNTVDTGRTVVCTIHQPSIDIFE
Sbjct: 1031 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1071


>ref|XP_004143306.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus]
          Length = 1455

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/77 (87%), Positives = 74/77 (96%)
 Frame = +2

Query: 2    ETFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVELNPIR 181
            ETFARVSGYCEQNDIHSPH+TVYES++YSAWLRL S VN ET+KMFV+EVMELVELNP+R
Sbjct: 935  ETFARVSGYCEQNDIHSPHLTVYESVLYSAWLRLPSSVNTETRKMFVEEVMELVELNPLR 994

Query: 182  DALVGLPGIDGLSTEQR 232
            +ALVGLPGIDGLSTEQR
Sbjct: 995  EALVGLPGIDGLSTEQR 1011



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 402  EPTSGLDARAAAIVMRTIRNTVDTGRTVVCTIHQPSIDIFE 524
            EPTSGLDARAAAIVMRT+RNTVDTGRTVVCTIHQPSIDIFE
Sbjct: 1031 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1071


>ref|XP_002527331.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223533331|gb|EEF35083.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1359

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/77 (84%), Positives = 73/77 (94%)
 Frame = +2

Query: 2    ETFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVELNPIR 181
            +TFAR+SGYCEQNDIHSPHVTVYESL+YSAWLRL  EV+ ET+KMFVDEVMELVELNP+R
Sbjct: 842  DTFARISGYCEQNDIHSPHVTVYESLIYSAWLRLAPEVDPETRKMFVDEVMELVELNPLR 901

Query: 182  DALVGLPGIDGLSTEQR 232
             ALVGLPG++GLSTEQR
Sbjct: 902  QALVGLPGVNGLSTEQR 918



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 402  EPTSGLDARAAAIVMRTIRNTVDTGRTVVCTIHQPSIDIFE 524
            EPTSGLDARAAAIVMRT+RNTVDTGRTVVCTIHQPSIDIFE
Sbjct: 938  EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 978


>ref|XP_002529079.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223531491|gb|EEF33323.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1446

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/76 (86%), Positives = 74/76 (97%)
 Frame = +2

Query: 5    TFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVELNPIRD 184
            TFARVSGYCEQNDIHSP+VTVYESL+YSAWLRL S+VNKET+KMFV+EVMELVEL P+R+
Sbjct: 927  TFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLASDVNKETRKMFVEEVMELVELKPLRN 986

Query: 185  ALVGLPGIDGLSTEQR 232
            ALVGLPG+DGLSTEQR
Sbjct: 987  ALVGLPGVDGLSTEQR 1002



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = +3

Query: 402  EPTSGLDARAAAIVMRTIRNTVDTGRTVVCTIHQPSIDIFE 524
            EPTSGLDARAAAIVMRT+RNTVDTGRTVVCTIHQPSIDIFE
Sbjct: 1022 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE 1062


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