BLASTX nr result
ID: Coptis24_contig00021071
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021071 (1001 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2... 384 e-104 ref|XP_003609377.1| WD repeat-containing protein [Medicago trunc... 380 e-103 ref|XP_004165979.1| PREDICTED: topless-related protein 4-like [C... 378 e-102 ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [C... 378 e-102 ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|2... 375 e-102 >ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1| predicted protein [Populus trichocarpa] Length = 1126 Score = 384 bits (986), Expect = e-104 Identities = 202/292 (69%), Positives = 219/292 (75%) Frame = +2 Query: 2 DSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNV 181 DSYVMSASGGKISLFN HPQDNNIIAIGM+DSSIQIYNV Sbjct: 846 DSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNV 905 Query: 182 RVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADAQLCVWSTDGWEKQASKFLQIPSGRV 361 RVDEVK+KLKGHQKR+TGLAFS+ LNVLVSSGAD+QLCVWSTD WEKQASKFLQIP+GRV Sbjct: 906 RVDEVKTKLKGHQKRITGLAFSHSLNVLVSSGADSQLCVWSTDAWEKQASKFLQIPTGRV 965 Query: 362 PASLAETRVQFHQDQIQFLTVHETQIAIYEASKLECLKQWVPQESSVPITHATYSCDSQS 541 +SLA+TRVQFH DQI L VHETQIAI+EA KLECLKQW P+E+S PITHATYSCDSQS Sbjct: 966 ASSLADTRVQFHLDQIHLLAVHETQIAIFEAPKLECLKQWFPREASGPITHATYSCDSQS 1025 Query: 542 IYASFGDGSVGVLTAITLRLRCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAYIPSN 721 IY SF DGSVGVLTA TLRLRCR TAY+P N Sbjct: 1026 IYVSFEDGSVGVLTASTLRLRCR---------------------------INSTAYLPPN 1058 Query: 722 ISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLPPSDN 877 SS RVYPLVIAAHP+EP+QFALGLTDG +HVLEPLESEGKWG+ PP +N Sbjct: 1059 PSS--LRVYPLVIAAHPSEPDQFALGLTDGGIHVLEPLESEGKWGTSPPVEN 1108 >ref|XP_003609377.1| WD repeat-containing protein [Medicago truncatula] gi|355510432|gb|AES91574.1| WD repeat-containing protein [Medicago truncatula] Length = 1132 Score = 380 bits (977), Expect = e-103 Identities = 202/310 (65%), Positives = 220/310 (70%) Frame = +2 Query: 2 DSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNV 181 DSYVMSASGGKISLFN HPQDNNIIAIGMDDSSIQIYNV Sbjct: 853 DSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNV 912 Query: 182 RVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADAQLCVWSTDGWEKQASKFLQIPSGRV 361 RVDEVK+KLKGHQKR+TGLAFS+VLN+LVSSGAD+QLCVWSTDGWEKQ +KFLQ+P+GR Sbjct: 913 RVDEVKTKLKGHQKRITGLAFSHVLNILVSSGADSQLCVWSTDGWEKQTNKFLQMPNGRA 972 Query: 362 PASLAETRVQFHQDQIQFLTVHETQIAIYEASKLECLKQWVPQESSVPITHATYSCDSQS 541 A LA+TRVQFH DQ L VHETQIAIYEA KLECLKQWVP+E+S PITHATYSCDSQS Sbjct: 973 LAPLADTRVQFHLDQTHLLAVHETQIAIYEAPKLECLKQWVPREASGPITHATYSCDSQS 1032 Query: 542 IYASFGDGSVGVLTAITLRLRCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAYIPSN 721 IY SF DGS+GVLTA TLRLRCR TAY+ N Sbjct: 1033 IYVSFEDGSIGVLTASTLRLRCR---------------------------INQTAYLNPN 1065 Query: 722 ISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLPPSDNXXXXXXXX 901 S RVYPLVIAAHP+E NQFALGLTDG VHVLEPLESEG+WGS PP++N Sbjct: 1066 PS---LRVYPLVIAAHPSESNQFALGLTDGGVHVLEPLESEGRWGSPPPTENGVGPSTPS 1122 Query: 902 XXXXXDQPTR 931 +QP R Sbjct: 1123 GASVSEQPQR 1132 >ref|XP_004165979.1| PREDICTED: topless-related protein 4-like [Cucumis sativus] Length = 623 Score = 378 bits (970), Expect = e-102 Identities = 201/310 (64%), Positives = 218/310 (70%) Frame = +2 Query: 2 DSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNV 181 DSYVMSASGGKISLFN HPQDNNIIAIGM+DSSIQIYNV Sbjct: 344 DSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNV 403 Query: 182 RVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADAQLCVWSTDGWEKQASKFLQIPSGRV 361 RVDEVK+KLKGHQKR+TGLAFSN LNVLVSSGAD+QLCVWSTDGWEKQ +KFLQ+PS R Sbjct: 404 RVDEVKTKLKGHQKRITGLAFSNQLNVLVSSGADSQLCVWSTDGWEKQVNKFLQVPSSRT 463 Query: 362 PASLAETRVQFHQDQIQFLTVHETQIAIYEASKLECLKQWVPQESSVPITHATYSCDSQS 541 A LA+TRVQFH DQI L +HETQIAIYEA KLECLKQWVP+E+S PITHAT+SCDSQS Sbjct: 464 TAPLADTRVQFHIDQIHLLAIHETQIAIYEAPKLECLKQWVPREASGPITHATFSCDSQS 523 Query: 542 IYASFGDGSVGVLTAITLRLRCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAYIPSN 721 IY SF DGSVGVLTA TLRLRCR AY+ SN Sbjct: 524 IYVSFEDGSVGVLTASTLRLRCR---------------------------INPNAYLSSN 556 Query: 722 ISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLPPSDNXXXXXXXX 901 S RV+PLVIAAHP+EPNQFALGL+DG VHVLEP ESEGKWG+ PP +N Sbjct: 557 PS---LRVHPLVIAAHPSEPNQFALGLSDGGVHVLEPSESEGKWGTSPPVENGAGPSTAT 613 Query: 902 XXXXXDQPTR 931 DQP R Sbjct: 614 GAAGPDQPQR 623 >ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [Cucumis sativus] Length = 1134 Score = 378 bits (970), Expect = e-102 Identities = 201/310 (64%), Positives = 218/310 (70%) Frame = +2 Query: 2 DSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNV 181 DSYVMSASGGKISLFN HPQDNNIIAIGM+DSSIQIYNV Sbjct: 855 DSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNV 914 Query: 182 RVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADAQLCVWSTDGWEKQASKFLQIPSGRV 361 RVDEVK+KLKGHQKR+TGLAFSN LNVLVSSGAD+QLCVWSTDGWEKQ +KFLQ+PS R Sbjct: 915 RVDEVKTKLKGHQKRITGLAFSNQLNVLVSSGADSQLCVWSTDGWEKQVNKFLQVPSSRT 974 Query: 362 PASLAETRVQFHQDQIQFLTVHETQIAIYEASKLECLKQWVPQESSVPITHATYSCDSQS 541 A LA+TRVQFH DQI L +HETQIAIYEA KLECLKQWVP+E+S PITHAT+SCDSQS Sbjct: 975 TAPLADTRVQFHIDQIHLLAIHETQIAIYEAPKLECLKQWVPREASGPITHATFSCDSQS 1034 Query: 542 IYASFGDGSVGVLTAITLRLRCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAYIPSN 721 IY SF DGSVGVLTA TLRLRCR AY+ SN Sbjct: 1035 IYVSFEDGSVGVLTASTLRLRCR---------------------------INPNAYLSSN 1067 Query: 722 ISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLPPSDNXXXXXXXX 901 S RV+PLVIAAHP+EPNQFALGL+DG VHVLEP ESEGKWG+ PP +N Sbjct: 1068 PS---LRVHPLVIAAHPSEPNQFALGLSDGGVHVLEPSESEGKWGTSPPVENGAGPSTAT 1124 Query: 902 XXXXXDQPTR 931 DQP R Sbjct: 1125 GAAGPDQPQR 1134 >ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|222854044|gb|EEE91591.1| predicted protein [Populus trichocarpa] Length = 1132 Score = 375 bits (964), Expect = e-102 Identities = 201/292 (68%), Positives = 215/292 (73%) Frame = +2 Query: 2 DSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNV 181 DSYVMSASGGKISLFN HPQDNNIIAIGM+DSSIQIYNV Sbjct: 852 DSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNV 911 Query: 182 RVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADAQLCVWSTDGWEKQASKFLQIPSGRV 361 RVDEVK+KLKGHQKR+TGLAFS+ LNVLVSSGAD+QLCVWSTD WEKQASKFLQIPSGRV Sbjct: 912 RVDEVKTKLKGHQKRITGLAFSHSLNVLVSSGADSQLCVWSTDAWEKQASKFLQIPSGRV 971 Query: 362 PASLAETRVQFHQDQIQFLTVHETQIAIYEASKLECLKQWVPQESSVPITHATYSCDSQS 541 SLA+TRVQFH DQI L VHETQIAI+EA KLEC KQW QE+S PITHATYSCDSQS Sbjct: 972 APSLADTRVQFHLDQIHLLAVHETQIAIFEAPKLECQKQWFRQEASGPITHATYSCDSQS 1031 Query: 542 IYASFGDGSVGVLTAITLRLRCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAYIPSN 721 I+ SF DGSV VLTA TLRLRCR TAY+P N Sbjct: 1032 IFVSFEDGSVVVLTASTLRLRCR---------------------------ISSTAYLPPN 1064 Query: 722 ISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLPPSDN 877 SS RVYPLVIAAHP+EP+QFALGLTDG VHVLEPLESEGKWG+ PP +N Sbjct: 1065 PSS--LRVYPLVIAAHPSEPDQFALGLTDGGVHVLEPLESEGKWGTSPPVEN 1114