BLASTX nr result
ID: Coptis24_contig00021063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021063
(1233 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243... 378 e-102
ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putat... 369 e-100
ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP... 365 2e-98
ref|XP_004146024.1| PREDICTED: polynucleotide 3'-phosphatase ZDP... 363 4e-98
gb|AFK35881.1| unknown [Lotus japonicus] 352 1e-94
>ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243613 [Vitis vinifera]
gi|302142893|emb|CBI20188.3| unnamed protein product
[Vitis vinifera]
Length = 354
Score = 378 bits (971), Expect = e-102
Identities = 196/346 (56%), Positives = 245/346 (70%), Gaps = 40/346 (11%)
Frame = +1
Query: 109 KIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRDERGFDMTKWHHLNCFPS---SLNSVE 279
K++ EYA I + +RLGLV R RGFDMTKWHH++CF + S++S E
Sbjct: 8 KVVVEYAKSNRSSCKTCSKTISANAVRLGLVTRGARGFDMTKWHHVHCFSAGSESISSAE 67
Query: 280 NITGFSLLNSTDQESLIN----FAKS------------------------PKRKAEEIEG 375
I GF+ L S+DQE+L FAKS ++ E+ +
Sbjct: 68 MIQGFASLKSSDQEALKKLVDGFAKSLDEVLDEGKDLTEGSKELICEELGVHKRDEDEKD 127
Query: 376 ENDEISGKKTK----GVEIEIEIVFSDSDVKNEYKGITLMNKWKAFETVLFLERDEGLVD 543
+ +E KKTK ++ E EI F+ S++K++YK TL+ KWKAF+TV+FLERD+ L D
Sbjct: 128 KREERDSKKTKMSAPALKAEQEIAFAVSNIKDKYKDATLLPKWKAFQTVIFLERDDDLHD 187
Query: 544 SKKIAAFDFDGCLANTNVKRVGENAWSLMYGCIPDKLKSLHEDGYKVVIFTNESNIDRWK 723
SKKIAAFDFDGCLA T+VKRVG +AWSLMY IPDKL+SL+ DGYK+VIFTNESNI+RWK
Sbjct: 188 SKKIAAFDFDGCLAKTSVKRVGPDAWSLMYPSIPDKLQSLYNDGYKLVIFTNESNIERWK 247
Query: 724 NKRKVAIDSKVGRLNNFIKCVGVPVQVFIACGYG-----GEDRYRKPKTGMWRLMEKHLN 888
NKR+VA+DSK+GRLNNFIKCV VP+QVFI+CG+ ED +RKPK GMWR+ME+H N
Sbjct: 248 NKRQVAVDSKIGRLNNFIKCVKVPIQVFISCGFDKSDGQAEDPFRKPKPGMWRIMEQHFN 307
Query: 889 SGNEIDMDESFYVGDAAGRVGDHSDADIKFAEAIGLKFYVPEDYFE 1026
SG IDMD+SFYVGDAAGR+ DHSDADIKFA+AIGLKFYVPE+YF+
Sbjct: 308 SGISIDMDQSFYVGDAAGRLNDHSDADIKFAQAIGLKFYVPEEYFD 353
>ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putative [Ricinus communis]
gi|223536189|gb|EEF37842.1| polynucleotide kinase-
3'-phosphatase, putative [Ricinus communis]
Length = 332
Score = 369 bits (948), Expect = e-100
Identities = 185/324 (57%), Positives = 232/324 (71%), Gaps = 19/324 (5%)
Frame = +1
Query: 109 KIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRDERGFDMTKWHHLNCFPSSLNSVENIT 288
KI+AEYA I +K LRLGLV +D RGFDMTKWHHL+CF +++S + I
Sbjct: 7 KIVAEYAKSNRSTCKKCSTVISAKALRLGLVTKDSRGFDMTKWHHLDCFSITISSTDAIG 66
Query: 289 GFSLLNSTDQESLINFAK---------SPKRKAE---------EIEGENDEISGKKTKGV 414
GF+ L S DQ++L SP R ++ E+E N I+ T
Sbjct: 67 GFASLQSRDQDALKKLISKGGREVVEGSPNRGSKRTRANMEEIELEERNSMITKLSTATE 126
Query: 415 EIEIEIVFSDSDVKNEYKGITLMNKWKAFETVLFLERDEGLVDSKKIAAFDFDGCLANTN 594
E ++EI S D+K+ YK + L+ KWKAF+TV+FLE D+GL DS KIAAFDFDGCLA T+
Sbjct: 127 EAQLEIAVSQIDIKDTYKDVLLLPKWKAFQTVIFLEGDDGLHDSSKIAAFDFDGCLAQTS 186
Query: 595 VKRVGENAWSLMYGCIPDKLKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNF 774
+KR+G +AWSLMY IP KL+ L++DGYK+VIFTNESNIDRWKNKR+VA+DSK+GRLNNF
Sbjct: 187 IKRIGADAWSLMYPSIPKKLQGLYKDGYKLVIFTNESNIDRWKNKRQVAVDSKIGRLNNF 246
Query: 775 IKCVGVPVQVFIACGYGG-EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAAGRVG 951
I+ V VP+QVFIAC ED +RKPK GMW++ME+H NSG ID+D+SFYVGDAAGR
Sbjct: 247 IRRVKVPIQVFIACADSKVEDPFRKPKPGMWQIMERHFNSGISIDLDQSFYVGDAAGRNN 306
Query: 952 DHSDADIKFAEAIGLKFYVPEDYF 1023
DHSDADI+FA+A+GLKF+VPEDYF
Sbjct: 307 DHSDADIRFAQAVGLKFFVPEDYF 330
>ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP-like [Cucumis sativus]
Length = 387
Score = 365 bits (936), Expect = 2e-98
Identities = 195/370 (52%), Positives = 246/370 (66%), Gaps = 40/370 (10%)
Frame = +1
Query: 34 TTPRLHKTPYFYIQFLSQN-MXXXXXKIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRD 210
T+P +H + +F FL + M KI+AEYA IP+ TLRLG V RD
Sbjct: 16 TSPFIHFSSHFTPFFLHHSPMSSSSLKIVAEYAKSNRSTCKNCSKTIPASTLRLGFVTRD 75
Query: 211 ERGFDMTKWHHLNCF---PSSLNSVENITGFSLLNSTDQESLINF------AKSPKRKAE 363
RGFDMT+W H +C P ++S E+I GF+LL +DQE+L +K KR +
Sbjct: 76 GRGFDMTRWFHSDCASFGPRPVSSAEDINGFALLKDSDQEALRKMVCRSHESKVHKRDED 135
Query: 364 EIEG-----------------ENDEISGKKTKGVEI-------EIEIVFSDSDVKNEYKG 471
E +G E D + + K V++ +++IV + S++K +YK
Sbjct: 136 EEDGVEEGDQKKVKVHKKDGVEEDGVEERDQKNVKLSTSSLQPKLDIVLTASNIKTKYKD 195
Query: 472 ITLMNKWKAFETVLFLERDEGLVDSKKIAAFDFDGCLANTNVKRVGENAWSLMYGCIPDK 651
TL+ KWKAF+T++FLE+D+GL S KIAAFDFDGCLANT+VKRVG AWSLMY IP K
Sbjct: 196 ATLLPKWKAFQTLIFLEQDDGLHHSSKIAAFDFDGCLANTSVKRVGAEAWSLMYPSIPQK 255
Query: 652 LKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNFIKCVGVPVQVFIACGYGG- 828
L+SL++DGYK+VIFTNESNI+RWKNKR+VA+DSK+GRLNNFI V VPVQVF+ACG G
Sbjct: 256 LQSLYDDGYKLVIFTNESNIERWKNKRQVAVDSKLGRLNNFISQVKVPVQVFVACGIGSK 315
Query: 829 -----EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAAGRVGDHSDADIKFAEAIG 993
ED +RKPK GMW +ME H N G ID+D+ FYVGDAAGR DHSDADIKFAEAIG
Sbjct: 316 SGKSEEDMFRKPKPGMWHIMESHFNGGIPIDIDQCFYVGDAAGRAKDHSDADIKFAEAIG 375
Query: 994 LKFYVPEDYF 1023
LKFYVPE++F
Sbjct: 376 LKFYVPEEFF 385
>ref|XP_004146024.1| PREDICTED: polynucleotide 3'-phosphatase ZDP-like [Cucumis sativus]
Length = 387
Score = 363 bits (933), Expect = 4e-98
Identities = 194/370 (52%), Positives = 246/370 (66%), Gaps = 40/370 (10%)
Frame = +1
Query: 34 TTPRLHKTPYFYIQFLSQN-MXXXXXKIIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRD 210
T+P +H + +F FL + M KI+AEYA IP+ TLRLG V RD
Sbjct: 16 TSPFIHFSSHFTPFFLHHSPMSSSSLKIVAEYAKSNRSTCKNCSKTIPASTLRLGFVTRD 75
Query: 211 ERGFDMTKWHHLNCF---PSSLNSVENITGFSLLNSTDQESLINF------AKSPKRKAE 363
RGFDMT+W H +C P ++S E+I GF+LL +DQE+L +K KR +
Sbjct: 76 GRGFDMTRWFHSDCASFGPRPVSSAEDINGFALLKDSDQEALRKMVCRSHESKVHKRDED 135
Query: 364 EIEG-----------------ENDEISGKKTKGVEI-------EIEIVFSDSDVKNEYKG 471
E +G E D + + K V++ +++IV + S++K +YK
Sbjct: 136 EEDGVEEGDQKKVKVHKKDGVEEDGVEERDQKNVKLSTSSLQPKLDIVLTASNIKTKYKD 195
Query: 472 ITLMNKWKAFETVLFLERDEGLVDSKKIAAFDFDGCLANTNVKRVGENAWSLMYGCIPDK 651
TL+ KWKAF+T++FLE+D+GL S KIAAFDFDGCLANT+VKRVG AWSLMY IP K
Sbjct: 196 ATLLPKWKAFQTLIFLEQDDGLHHSSKIAAFDFDGCLANTSVKRVGAEAWSLMYPSIPQK 255
Query: 652 LKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNFIKCVGVPVQVFIACGYGG- 828
L+SL++DGYK+VIFTNESNI+RWKNKR+VA+DSK+GRLNNFI V VPVQVF+ACG G
Sbjct: 256 LQSLYDDGYKLVIFTNESNIERWKNKRQVAVDSKLGRLNNFISQVKVPVQVFVACGIGSK 315
Query: 829 -----EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAAGRVGDHSDADIKFAEAIG 993
ED +RKPK GMW +ME H N G ID+D+ FYVGDAAGR DHSDADIKFA+AIG
Sbjct: 316 SGKSEEDMFRKPKPGMWHIMESHFNGGIPIDIDQCFYVGDAAGRAKDHSDADIKFAQAIG 375
Query: 994 LKFYVPEDYF 1023
LKFYVPE++F
Sbjct: 376 LKFYVPEEFF 385
>gb|AFK35881.1| unknown [Lotus japonicus]
Length = 380
Score = 352 bits (902), Expect = 1e-94
Identities = 189/329 (57%), Positives = 231/329 (70%), Gaps = 24/329 (7%)
Frame = +1
Query: 112 IIAEYAXXXXXXXXXXXXAIPSKTLRLGLVNRDE-RGFDMTKWHHLNCFPSSL-NSVENI 285
I AEYA I +K+LRLG+V++D+ RGF+ KWH L CFP +S I
Sbjct: 51 IKAEYAKSNRSSCKGCSKTIENKSLRLGIVSKDKTRGFETVKWHRLTCFPPPYPDSPHII 110
Query: 286 TGFSLLNSTDQESLINFAKSP-------KRKAEEIEGEN---DEISGKK----TKGVEIE 423
TGFS L S+DQE++ +S R E+I+ E +E KK T V+
Sbjct: 111 TGFSSLESSDQEAVKELFESHDCSEEKVSRATEDIQNEQKETEESDSKKRKLSTSDVKAV 170
Query: 424 IEIVFSDSDVKNEYKGITLMNKWKAFETVLFLERDEGLVDSKKIAAFDFDGCLANTNVKR 603
++I FS SDV ++YK TL+ KWKAF+TV+FLERD+GL DS KIAAFDFDGCLANT V R
Sbjct: 171 VDISFSVSDVMSKYKDATLLPKWKAFQTVIFLERDDGLRDSSKIAAFDFDGCLANTAVNR 230
Query: 604 VGENAWSLMYGCIPDKLKSLHEDGYKVVIFTNESNIDRWKNKRKVAIDSKVGRLNNFIKC 783
VG AWSLMY IPDKL+SL+ +GYK+VIFTNESNI+RWK R+ A+DSK+GRLNNFI+
Sbjct: 231 VGPKAWSLMYQSIPDKLQSLYNNGYKLVIFTNESNIERWKKSRQKAVDSKIGRLNNFIEK 290
Query: 784 VGVPVQVFIACGYGG--------EDRYRKPKTGMWRLMEKHLNSGNEIDMDESFYVGDAA 939
V VP+QVFIACG +D YRKPK GMW+LME+H NSG IDMD+SFYVGDAA
Sbjct: 291 VKVPIQVFIACGLSNSGKAAGKEDDPYRKPKPGMWQLMEQHSNSGITIDMDQSFYVGDAA 350
Query: 940 GRVGDHSDADIKFAEAIGLKFYVPEDYFE 1026
GR DHSDADIKFAEAIGLKF++PE+YF+
Sbjct: 351 GRKSDHSDADIKFAEAIGLKFHLPEEYFK 379