BLASTX nr result
ID: Coptis24_contig00021044
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021044
(1030 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274590.1| PREDICTED: GMP synthase [glutamine-hydrolyzi... 229 e-112
ref|XP_004143903.1| PREDICTED: GMP synthase [glutamine-hydrolyzi... 223 e-110
ref|XP_004159945.1| PREDICTED: LOW QUALITY PROTEIN: GMP synthase... 221 e-109
ref|XP_002304500.1| predicted protein [Populus trichocarpa] gi|2... 224 e-109
ref|XP_003532797.1| PREDICTED: GMP synthase [glutamine-hydrolyzi... 212 e-107
>ref|XP_002274590.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] [Vitis vinifera]
Length = 534
Score = 229 bits (584), Expect(3) = e-112
Identities = 115/147 (78%), Positives = 124/147 (84%)
Frame = +3
Query: 228 RRIRKLSIFSLCISGTSSLKSITDLNPRVIILSGGPHSVHSENAPSFPDGFVEYVEKNGV 407
RRIR LS+FSLCISGTSSLKSI DL PRVIILSGGPHSVHS N+PSFPDGFV+YVE NGV
Sbjct: 26 RRIRSLSVFSLCISGTSSLKSIVDLKPRVIILSGGPHSVHSPNSPSFPDGFVDYVESNGV 85
Query: 408 FVLGICYGLQLVVQKLGGEVKVGERQEYGRMEIVVEKNDNEAGLFGMKSVGDTQCVWMSH 587
FVLGICYGLQL+VQ+LGG V+VGERQEYGRMEI V + GLFG K VG Q VWMSH
Sbjct: 86 FVLGICYGLQLLVQRLGGIVRVGERQEYGRMEIEVVR---ACGLFGSKEVGHKQTVWMSH 142
Query: 588 GDEVVNLPTGFSVVARSQQGSVAAIEN 668
GDE LP GF VVARSQQG+VAA+EN
Sbjct: 143 GDEAAELPEGFEVVARSQQGAVAAVEN 169
Score = 181 bits (460), Expect(3) = e-112
Identities = 83/101 (82%), Positives = 94/101 (93%)
Frame = +2
Query: 728 RKFYGLQYHPEVTHSPEGMETLQHFLFNVCGITADWKMEDVMEEEIKVINELVAPEDHVI 907
R+FYGLQYHPEVTHSPEGMETL++FLF+VC + A W MEDV+ EEIK+I +VAP+DHVI
Sbjct: 172 RRFYGLQYHPEVTHSPEGMETLRYFLFDVCRVDAGWNMEDVLNEEIKLIKGMVAPDDHVI 231
Query: 908 CALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRFKERER 1030
CALSGGVDSTVAATLVHKAIGDRLHC+FVDNGLLR+KERER
Sbjct: 232 CALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERER 272
Score = 43.1 bits (100), Expect(3) = e-112
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 62 MEHQTRKSNLVLILDYGSQYTHLIT 136
M+ + KSNLVLILDYGSQYTHLIT
Sbjct: 1 MDPENVKSNLVLILDYGSQYTHLIT 25
>ref|XP_004143903.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Cucumis
sativus]
Length = 534
Score = 223 bits (568), Expect(3) = e-110
Identities = 110/147 (74%), Positives = 127/147 (86%)
Frame = +3
Query: 228 RRIRKLSIFSLCISGTSSLKSITDLNPRVIILSGGPHSVHSENAPSFPDGFVEYVEKNGV 407
RRIR LS+FSLCISGTSSLK+ITDLNP+V+ILSGGPHSVH+ ++PSF GFVE+ E NGV
Sbjct: 26 RRIRSLSVFSLCISGTSSLKAITDLNPQVVILSGGPHSVHACDSPSFASGFVEWAEANGV 85
Query: 408 FVLGICYGLQLVVQKLGGEVKVGERQEYGRMEIVVEKNDNEAGLFGMKSVGDTQCVWMSH 587
+VLGICYGLQL+VQ+LGG V+VGE+QEYGRMEI VEK + GL+G K VGD Q VWMSH
Sbjct: 86 YVLGICYGLQLIVQRLGGVVEVGEKQEYGRMEIEVEKAN---GLYGTKRVGDRQVVWMSH 142
Query: 588 GDEVVNLPTGFSVVARSQQGSVAAIEN 668
GDEV LP GF VVARSQQG+VAA+EN
Sbjct: 143 GDEVAKLPQGFEVVARSQQGAVAAVEN 169
Score = 185 bits (470), Expect(3) = e-110
Identities = 83/101 (82%), Positives = 97/101 (96%)
Frame = +2
Query: 728 RKFYGLQYHPEVTHSPEGMETLQHFLFNVCGITADWKMEDVMEEEIKVINELVAPEDHVI 907
++FYGLQYHPEVTHSPEGMETL++FLF+VCGITA+WKME++++EEI +I E V P+DHVI
Sbjct: 172 KRFYGLQYHPEVTHSPEGMETLRYFLFDVCGITANWKMENLLDEEINIIKETVGPDDHVI 231
Query: 908 CALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRFKERER 1030
CALSGGVDSTVAATLVHKAIGDRLHC+FVDNGLLR+KERER
Sbjct: 232 CALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERER 272
Score = 38.9 bits (89), Expect(3) = e-110
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 62 MEHQTRKSNLVLILDYGSQYTHLIT 136
M+ + KS+LVLILD+GSQYTHLIT
Sbjct: 1 MDPKEVKSDLVLILDFGSQYTHLIT 25
>ref|XP_004159945.1| PREDICTED: LOW QUALITY PROTEIN: GMP synthase
[glutamine-hydrolyzing]-like [Cucumis sativus]
Length = 534
Score = 221 bits (564), Expect(3) = e-109
Identities = 110/147 (74%), Positives = 126/147 (85%)
Frame = +3
Query: 228 RRIRKLSIFSLCISGTSSLKSITDLNPRVIILSGGPHSVHSENAPSFPDGFVEYVEKNGV 407
RRIR LS FSLCISGTSSLK+ITDLNP+V+ILSGGPHSVH+ ++PSF GFVE+ E NGV
Sbjct: 26 RRIRSLSXFSLCISGTSSLKAITDLNPQVVILSGGPHSVHACDSPSFASGFVEWAEANGV 85
Query: 408 FVLGICYGLQLVVQKLGGEVKVGERQEYGRMEIVVEKNDNEAGLFGMKSVGDTQCVWMSH 587
+VLGICYGLQL+VQ+LGG V+VGE+QEYGRMEI VEK + GL+G K VGD Q VWMSH
Sbjct: 86 YVLGICYGLQLIVQRLGGVVEVGEKQEYGRMEIEVEKAN---GLYGTKRVGDRQVVWMSH 142
Query: 588 GDEVVNLPTGFSVVARSQQGSVAAIEN 668
GDEV LP GF VVARSQQG+VAA+EN
Sbjct: 143 GDEVAKLPQGFEVVARSQQGAVAAVEN 169
Score = 185 bits (470), Expect(3) = e-109
Identities = 83/101 (82%), Positives = 97/101 (96%)
Frame = +2
Query: 728 RKFYGLQYHPEVTHSPEGMETLQHFLFNVCGITADWKMEDVMEEEIKVINELVAPEDHVI 907
++FYGLQYHPEVTHSPEGMETL++FLF+VCGITA+WKME++++EEI +I E V P+DHVI
Sbjct: 172 KRFYGLQYHPEVTHSPEGMETLRYFLFDVCGITANWKMENLLDEEINIIKETVGPDDHVI 231
Query: 908 CALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRFKERER 1030
CALSGGVDSTVAATLVHKAIGDRLHC+FVDNGLLR+KERER
Sbjct: 232 CALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERER 272
Score = 38.9 bits (89), Expect(3) = e-109
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 62 MEHQTRKSNLVLILDYGSQYTHLIT 136
M+ + KS+LVLILD+GSQYTHLIT
Sbjct: 1 MDPKEVKSDLVLILDFGSQYTHLIT 25
>ref|XP_002304500.1| predicted protein [Populus trichocarpa] gi|222841932|gb|EEE79479.1|
predicted protein [Populus trichocarpa]
Length = 534
Score = 224 bits (571), Expect(3) = e-109
Identities = 108/147 (73%), Positives = 126/147 (85%)
Frame = +3
Query: 228 RRIRKLSIFSLCISGTSSLKSITDLNPRVIILSGGPHSVHSENAPSFPDGFVEYVEKNGV 407
RRIR L+IFSLCISGTSSL++IT NP+V+ILSGGPHSVHS N+P+FP GFVE+ +K G+
Sbjct: 26 RRIRSLNIFSLCISGTSSLETITSHNPKVVILSGGPHSVHSANSPTFPSGFVEWAQKGGI 85
Query: 408 FVLGICYGLQLVVQKLGGEVKVGERQEYGRMEIVVEKNDNEAGLFGMKSVGDTQCVWMSH 587
FVLG+CYGLQL+VQ+LGG+V VG+RQEYGRMEI VEKN G+FG K VGD Q VWMSH
Sbjct: 86 FVLGVCYGLQLIVQRLGGQVDVGQRQEYGRMEIEVEKN---LGVFGNKKVGDKQVVWMSH 142
Query: 588 GDEVVNLPTGFSVVARSQQGSVAAIEN 668
GDE V LP GF VVARSQQG+VAA+EN
Sbjct: 143 GDETVKLPYGFEVVARSQQGAVAAVEN 169
Score = 179 bits (453), Expect(3) = e-109
Identities = 80/100 (80%), Positives = 95/100 (95%)
Frame = +2
Query: 731 KFYGLQYHPEVTHSPEGMETLQHFLFNVCGITADWKMEDVMEEEIKVINELVAPEDHVIC 910
+F+GLQYHPEVTHSPEGM+TL++FLF+VCG++ W ME+V++EEI+VIN+ V PE+HVIC
Sbjct: 173 RFFGLQYHPEVTHSPEGMDTLRYFLFDVCGVSPGWNMENVLDEEIRVINDAVGPEEHVIC 232
Query: 911 ALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRFKERER 1030
ALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLR+KERER
Sbjct: 233 ALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRYKERER 272
Score = 40.8 bits (94), Expect(3) = e-109
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 62 MEHQTRKSNLVLILDYGSQYTHLIT 136
M+ + KS+LVLILDYGSQYTHLIT
Sbjct: 1 MDPKAVKSDLVLILDYGSQYTHLIT 25
>ref|XP_003532797.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Glycine max]
Length = 534
Score = 212 bits (539), Expect(3) = e-107
Identities = 103/147 (70%), Positives = 122/147 (82%)
Frame = +3
Query: 228 RRIRKLSIFSLCISGTSSLKSITDLNPRVIILSGGPHSVHSENAPSFPDGFVEYVEKNGV 407
RRIR LS+FSLCISGTSSL +ITDLNP V+ILSGGPHSVH+ ++PSFPDGF+++ NGV
Sbjct: 26 RRIRSLSVFSLCISGTSSLSTITDLNPSVVILSGGPHSVHTPDSPSFPDGFLQWAHSNGV 85
Query: 408 FVLGICYGLQLVVQKLGGEVKVGERQEYGRMEIVVEKNDNEAGLFGMKSVGDTQCVWMSH 587
VLGICYGLQL+VQ+LGG+V+VG++QEYGRMEI +K + LFG + VG Q VWMSH
Sbjct: 86 TVLGICYGLQLLVQRLGGDVRVGDKQEYGRMEICADK---PSALFGPEKVGKRQVVWMSH 142
Query: 588 GDEVVNLPTGFSVVARSQQGSVAAIEN 668
GDE V LP GF VVARS QG+VAAIEN
Sbjct: 143 GDEAVTLPDGFHVVARSDQGAVAAIEN 169
Score = 183 bits (465), Expect(3) = e-107
Identities = 86/100 (86%), Positives = 92/100 (92%)
Frame = +2
Query: 731 KFYGLQYHPEVTHSPEGMETLQHFLFNVCGITADWKMEDVMEEEIKVINELVAPEDHVIC 910
K YGLQYHPEVTHS EGMETLQ FLF+VCG+ A WKMEDVMEEEIKVI E V P++HVIC
Sbjct: 173 KLYGLQYHPEVTHSEEGMETLQRFLFDVCGVGAGWKMEDVMEEEIKVIKETVGPDEHVIC 232
Query: 911 ALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRFKERER 1030
ALSGGVDSTVAATLVHKAIGDRLHC+FVDNGLLR+KERER
Sbjct: 233 ALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERER 272
Score = 40.8 bits (94), Expect(3) = e-107
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 62 MEHQTRKSNLVLILDYGSQYTHLIT 136
M+ + KS+LVLILDYGSQYTHLIT
Sbjct: 1 MDPKNVKSDLVLILDYGSQYTHLIT 25