BLASTX nr result

ID: Coptis24_contig00021020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021020
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23591.3| unnamed protein product [Vitis vinifera]              265   3e-69
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   265   3e-69
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   263   1e-68
emb|CBI23594.3| unnamed protein product [Vitis vinifera]              263   1e-68
emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]   263   1e-68

>emb|CBI23591.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  265 bits (677), Expect = 3e-69
 Identities = 120/163 (73%), Positives = 142/163 (87%)
 Frame = +2

Query: 2   LLELISEGLGLKPSHLKDMDCAEGLSLACHYYPACPEPELTLGATKHSDNAFLTILLQDQ 181
           L ELISE LGL P+HLKDMDC EGLS+ CHYYP+CP+PELT+G TKH+DN FLT+LLQDQ
Sbjct: 33  LFELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQ 92

Query: 182 IGGLQVLYQNQWIDVPPMPGSLVINIGDFLQLVSNDRLKSSEHRVIANKEGPRMSVACFL 361
           IGGLQVL+Q QWIDVPPMPG+LVIN+GD LQL++NDR KS EHRV+AN  GPR+SVACF 
Sbjct: 93  IGGLQVLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHIGPRVSVACFF 152

Query: 362 STFLRKSTKLYGPIKELLSEQNPPIYRATTMKDYIIYYNQKGL 490
           ST ++ S+KLYGPIKELLSE+NPP Y+ TT+ DY+ Y+N KGL
Sbjct: 153 STSIQPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGL 195


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  265 bits (677), Expect = 3e-69
 Identities = 120/163 (73%), Positives = 142/163 (87%)
 Frame = +2

Query: 2   LLELISEGLGLKPSHLKDMDCAEGLSLACHYYPACPEPELTLGATKHSDNAFLTILLQDQ 181
           L ELISE LGL P+HLKDMDC EGLS+ CHYYP+CP+PELT+G TKH+DN FLT+LLQDQ
Sbjct: 192 LFELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQ 251

Query: 182 IGGLQVLYQNQWIDVPPMPGSLVINIGDFLQLVSNDRLKSSEHRVIANKEGPRMSVACFL 361
           IGGLQVL+Q QWIDVPPMPG+LVIN+GD LQL++NDR KS EHRV+AN  GPR+SVACF 
Sbjct: 252 IGGLQVLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHIGPRVSVACFF 311

Query: 362 STFLRKSTKLYGPIKELLSEQNPPIYRATTMKDYIIYYNQKGL 490
           ST ++ S+KLYGPIKELLSE+NPP Y+ TT+ DY+ Y+N KGL
Sbjct: 312 STSIQPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGL 354


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score =  263 bits (672), Expect = 1e-68
 Identities = 120/163 (73%), Positives = 144/163 (88%)
 Frame = +2

Query: 2   LLELISEGLGLKPSHLKDMDCAEGLSLACHYYPACPEPELTLGATKHSDNAFLTILLQDQ 181
           LLELISE LGLK +HLKDMDCAEGL++ CHYYPACP+PELT+G TKH+DN FLT+LLQD+
Sbjct: 500 LLELISEALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTMGTTKHADNDFLTVLLQDE 559

Query: 182 IGGLQVLYQNQWIDVPPMPGSLVINIGDFLQLVSNDRLKSSEHRVIANKEGPRMSVACFL 361
           IGGLQVL+Q+QW+DVPPMPG+LVINIGD LQL++NDR KS EHRV+A+ +GPR+SVACF 
Sbjct: 560 IGGLQVLHQDQWVDVPPMPGALVINIGDLLQLITNDRFKSVEHRVLASHKGPRVSVACFF 619

Query: 362 STFLRKSTKLYGPIKELLSEQNPPIYRATTMKDYIIYYNQKGL 490
           ST L  S KLYGPIKELLSE+NPP YR  T++D++ Y+N KGL
Sbjct: 620 STALLPSLKLYGPIKELLSEENPPKYREITVRDFVAYFNAKGL 662



 Score =  254 bits (648), Expect = 7e-66
 Identities = 117/163 (71%), Positives = 138/163 (84%)
 Frame = +2

Query: 2   LLELISEGLGLKPSHLKDMDCAEGLSLACHYYPACPEPELTLGATKHSDNAFLTILLQDQ 181
           L ELISE LGL P+HLKDMDCAEGLS+ CHYYP+CP+PELT+G TKH+DN FLT+LLQDQ
Sbjct: 192 LFELISEALGLNPNHLKDMDCAEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQ 251

Query: 182 IGGLQVLYQNQWIDVPPMPGSLVINIGDFLQLVSNDRLKSSEHRVIANKEGPRMSVACFL 361
           IGGLQVL+Q QWIDVPP  G+LVIN+GD LQL++NDR KS +HRV AN  GPR+SVACF 
Sbjct: 252 IGGLQVLHQGQWIDVPPRLGALVINVGDLLQLITNDRFKSVKHRVPANHIGPRVSVACFF 311

Query: 362 STFLRKSTKLYGPIKELLSEQNPPIYRATTMKDYIIYYNQKGL 490
            T ++ S+KLYGPIKEL SE+NPP YR TT+ DY+ Y+N KGL
Sbjct: 312 RTSIQPSSKLYGPIKELSSEENPPKYRETTVGDYVAYFNSKGL 354


>emb|CBI23594.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  263 bits (672), Expect = 1e-68
 Identities = 120/163 (73%), Positives = 144/163 (88%)
 Frame = +2

Query: 2   LLELISEGLGLKPSHLKDMDCAEGLSLACHYYPACPEPELTLGATKHSDNAFLTILLQDQ 181
           LLELISE LGLK +HLKDMDCAEGL++ CHYYPACP+PELT+G TKH+DN FLT+LLQD+
Sbjct: 159 LLELISEALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTMGTTKHADNDFLTVLLQDE 218

Query: 182 IGGLQVLYQNQWIDVPPMPGSLVINIGDFLQLVSNDRLKSSEHRVIANKEGPRMSVACFL 361
           IGGLQVL+Q+QW+DVPPMPG+LVINIGD LQL++NDR KS EHRV+A+ +GPR+SVACF 
Sbjct: 219 IGGLQVLHQDQWVDVPPMPGALVINIGDLLQLITNDRFKSVEHRVLASHKGPRVSVACFF 278

Query: 362 STFLRKSTKLYGPIKELLSEQNPPIYRATTMKDYIIYYNQKGL 490
           ST L  S KLYGPIKELLSE+NPP YR  T++D++ Y+N KGL
Sbjct: 279 STALLPSLKLYGPIKELLSEENPPKYREITVRDFVAYFNAKGL 321


>emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]
          Length = 367

 Score =  263 bits (672), Expect = 1e-68
 Identities = 120/163 (73%), Positives = 144/163 (88%)
 Frame = +2

Query: 2   LLELISEGLGLKPSHLKDMDCAEGLSLACHYYPACPEPELTLGATKHSDNAFLTILLQDQ 181
           LLELISE LGLK +HLKDMDCAEGL++ CHYYPACP+PELT+G TKH+DN FLT+LLQD+
Sbjct: 194 LLELISEALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTMGTTKHADNDFLTVLLQDE 253

Query: 182 IGGLQVLYQNQWIDVPPMPGSLVINIGDFLQLVSNDRLKSSEHRVIANKEGPRMSVACFL 361
           IGGLQVL+Q+QW+DVPPMPG+LVINIGD LQL++NDR KS EHRV+A+ +GPR+SVACF 
Sbjct: 254 IGGLQVLHQDQWVDVPPMPGALVINIGDLLQLITNDRFKSVEHRVLASHKGPRVSVACFF 313

Query: 362 STFLRKSTKLYGPIKELLSEQNPPIYRATTMKDYIIYYNQKGL 490
           ST L  S KLYGPIKELLSE+NPP YR  T++D++ Y+N KGL
Sbjct: 314 STALLPSLKLYGPIKELLSEENPPKYREITVRDFVAYFNAKGL 356


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