BLASTX nr result
ID: Coptis24_contig00021019
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021019 (659 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003626920.1| GRF zinc finger containing protein [Medicago... 59 6e-07 ref|XP_003595157.1| GRF zinc finger containing protein [Medicago... 58 1e-06 ref|XP_003612076.1| GRF zinc finger containing protein [Medicago... 58 2e-06 ref|XP_003593148.1| GRF zinc finger containing protein [Medicago... 57 2e-06 ref|XP_003599949.1| GRF zinc finger containing protein [Medicago... 57 3e-06 >ref|XP_003626920.1| GRF zinc finger containing protein [Medicago truncatula] gi|355520942|gb|AET01396.1| GRF zinc finger containing protein [Medicago truncatula] Length = 116 Score = 59.3 bits (142), Expect = 6e-07 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = -2 Query: 385 CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWIDP--PSEPGKKYRALYYAH 212 C+CG SP+ S++D NPGRRF+GC Y KC FF W DP P K RAL + Sbjct: 22 CYCGVDSPLVTSWTDENPGRRFHGCGRY-FVGRKCNFFRWYDPEVPDRQKKIIRALLRKN 80 Query: 211 EDLK 200 ++LK Sbjct: 81 DELK 84 >ref|XP_003595157.1| GRF zinc finger containing protein [Medicago truncatula] gi|355484205|gb|AES65408.1| GRF zinc finger containing protein [Medicago truncatula] Length = 106 Score = 58.2 bits (139), Expect = 1e-06 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Frame = -2 Query: 442 DQNASNLIMSRRSENSSKSCFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWI 263 + ++S++ S + + C+CG SP+ S++D NPGRRF+GC KC FF W Sbjct: 3 EYSSSSISGSTLNHRTKLVCYCGVDSPLVTSWTDENPGRRFHGC-GRDFVGRKCNFFRWY 61 Query: 262 DP--PSEPGKKYRALYYAHEDLK 200 DP P K RAL +++LK Sbjct: 62 DPEVPDRQKKIIRALLRKNDELK 84 >ref|XP_003612076.1| GRF zinc finger containing protein [Medicago truncatula] gi|355513411|gb|AES95034.1| GRF zinc finger containing protein [Medicago truncatula] Length = 116 Score = 57.8 bits (138), Expect = 2e-06 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Frame = -2 Query: 436 NASNLIMSRRSENSSKS-CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWID 260 N+S+ + S S+ C+CG SP+ +++D NPGRRF+GC Y KC FF W D Sbjct: 5 NSSSTVFGSSSMAKSRLVCYCGVESPLVTAWTDENPGRRFHGCGKYFQ-RRKCSFFRWFD 63 Query: 259 P--PSEPGKKYRALYYAHEDLK 200 P P K R L ++ +K Sbjct: 64 PEVPERQKKLIRGLLKKNDAMK 85 >ref|XP_003593148.1| GRF zinc finger containing protein [Medicago truncatula] gi|355482196|gb|AES63399.1| GRF zinc finger containing protein [Medicago truncatula] Length = 116 Score = 57.4 bits (137), Expect = 2e-06 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Frame = -2 Query: 436 NASNLIMSRRSENSSKS-CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWID 260 N+S+ + S S+ C+CG SP+ +++D NPGRRF+GC Y KC FF W D Sbjct: 5 NSSSTVFGSSSMAKSRLVCYCGVESPLVTAWTDENPGRRFHGCGKYFQ-RRKCSFFRWFD 63 Query: 259 P--PSEPGKKYRALYYAHEDLK 200 P P K R L ++ +K Sbjct: 64 PEVPERRKKLIRGLLKKNDAMK 85 >ref|XP_003599949.1| GRF zinc finger containing protein [Medicago truncatula] gi|355488997|gb|AES70200.1| GRF zinc finger containing protein [Medicago truncatula] Length = 114 Score = 57.0 bits (136), Expect = 3e-06 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = -2 Query: 385 CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWIDP--PSEPGKKYRALYYAH 212 C+CG SP+ +++D NPGRRF+GC Y KC FF W DP P K R L + Sbjct: 23 CYCGVESPLVTAWTDENPGRRFHGCGKYWQ-RRKCSFFRWFDPEVPDRQKKVIRGLLKKN 81 Query: 211 EDLK 200 + LK Sbjct: 82 DALK 85