BLASTX nr result

ID: Coptis24_contig00021019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021019
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626920.1| GRF zinc finger containing protein [Medicago...    59   6e-07
ref|XP_003595157.1| GRF zinc finger containing protein [Medicago...    58   1e-06
ref|XP_003612076.1| GRF zinc finger containing protein [Medicago...    58   2e-06
ref|XP_003593148.1| GRF zinc finger containing protein [Medicago...    57   2e-06
ref|XP_003599949.1| GRF zinc finger containing protein [Medicago...    57   3e-06

>ref|XP_003626920.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355520942|gb|AET01396.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = -2

Query: 385 CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWIDP--PSEPGKKYRALYYAH 212
           C+CG  SP+  S++D NPGRRF+GC  Y     KC FF W DP  P    K  RAL   +
Sbjct: 22  CYCGVDSPLVTSWTDENPGRRFHGCGRY-FVGRKCNFFRWYDPEVPDRQKKIIRALLRKN 80

Query: 211 EDLK 200
           ++LK
Sbjct: 81  DELK 84


>ref|XP_003595157.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355484205|gb|AES65408.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 106

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
 Frame = -2

Query: 442 DQNASNLIMSRRSENSSKSCFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWI 263
           + ++S++  S  +  +   C+CG  SP+  S++D NPGRRF+GC        KC FF W 
Sbjct: 3   EYSSSSISGSTLNHRTKLVCYCGVDSPLVTSWTDENPGRRFHGC-GRDFVGRKCNFFRWY 61

Query: 262 DP--PSEPGKKYRALYYAHEDLK 200
           DP  P    K  RAL   +++LK
Sbjct: 62  DPEVPDRQKKIIRALLRKNDELK 84


>ref|XP_003612076.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355513411|gb|AES95034.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = -2

Query: 436 NASNLIMSRRSENSSKS-CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWID 260
           N+S+ +    S   S+  C+CG  SP+  +++D NPGRRF+GC  Y     KC FF W D
Sbjct: 5   NSSSTVFGSSSMAKSRLVCYCGVESPLVTAWTDENPGRRFHGCGKYFQ-RRKCSFFRWFD 63

Query: 259 P--PSEPGKKYRALYYAHEDLK 200
           P  P    K  R L   ++ +K
Sbjct: 64  PEVPERQKKLIRGLLKKNDAMK 85


>ref|XP_003593148.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355482196|gb|AES63399.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = -2

Query: 436 NASNLIMSRRSENSSKS-CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWID 260
           N+S+ +    S   S+  C+CG  SP+  +++D NPGRRF+GC  Y     KC FF W D
Sbjct: 5   NSSSTVFGSSSMAKSRLVCYCGVESPLVTAWTDENPGRRFHGCGKYFQ-RRKCSFFRWFD 63

Query: 259 P--PSEPGKKYRALYYAHEDLK 200
           P  P    K  R L   ++ +K
Sbjct: 64  PEVPERRKKLIRGLLKKNDAMK 85


>ref|XP_003599949.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355488997|gb|AES70200.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 114

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = -2

Query: 385 CFCGSPSPIQMSFSDNNPGRRFNGCINYRNPNGKCLFFEWIDP--PSEPGKKYRALYYAH 212
           C+CG  SP+  +++D NPGRRF+GC  Y     KC FF W DP  P    K  R L   +
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFHGCGKYWQ-RRKCSFFRWFDPEVPDRQKKVIRGLLKKN 81

Query: 211 EDLK 200
           + LK
Sbjct: 82  DALK 85


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