BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021017
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-13
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    79   5e-13
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    75   9e-12
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    75   9e-12

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
 Frame = -1

Query: 456 SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 280
           +QLP  ++++I KKI    D + F  VC  W+ S++P  P++L  + PWL++P +  + S
Sbjct: 6   TQLPPELIEIISKKITIYSDYLHFQAVCHAWK-SSIPKTPNHLPPQLPWLLLPQSQSNQS 64

Query: 279 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHR--ICGSCRGGWLVTVNSFGDIQLLHPFA 106
                      FF+LST K + ++LPE A+HR   CGS   GWL+ ++    I +++P  
Sbjct: 65  SYRA-------FFNLSTYKFHSLNLPE-ASHRKKHCGSSH-GWLIILDDSPSILVINPLT 115

Query: 105 RKVISLAPVTALPGVVSCYY 46
           R+ I L  +++ P VVS  Y
Sbjct: 116 RRKIHLPAISSFPNVVSFDY 135


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
 Frame = -1

Query: 456 SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 280
           SQLP  ++++I K +    D +    VC  WR S +P  P++L  + PWL++P +    +
Sbjct: 6   SQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFS-IPKTPNHLPPQLPWLMLPQSQSQSN 64

Query: 279 KTGTACDKTLGFFDLSTRKLYKVDLPEIA-NHRICGSCRGGWLVTVNSFGDIQLLHPFAR 103
           ++  A      FF LST K + ++LPE++   R CGS   GWL+ ++    I L++P  R
Sbjct: 65  QSRRA------FFSLSTNKFHFLNLPEVSYRKRHCGSSH-GWLMILDDTPTILLINPLTR 117

Query: 102 KVISLAPVTALPGVVSCYYNE 40
             +SL P+++ P V+S  Y++
Sbjct: 118 AKLSLPPLSSFPNVISFNYSD 138


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
 Frame = -1

Query: 456 SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 280
           S+LPQ +L  I +K     D I    VCK+W  SA+P  P +L  + PWL++P+  D+ +
Sbjct: 5   SELPQELLQTITQKQTNYVDYISTRAVCKSW-WSAIPKKPHDLLCRLPWLLLPHHKDNPN 63

Query: 279 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLLHPFARK 100
             G        F++ S  K Y ++LPE  + R CGS   GWLV V     I LL+P  + 
Sbjct: 64  HRG--------FYNPSDGKTYHLELPETVDKRCCGSSH-GWLVMVEDTPSIFLLNPLTKS 114

Query: 99  VISLAPVTALPGVVS--CYYNERQNLVYDVKN 10
            I L  ++  P   +   Y N R    Y ++N
Sbjct: 115 RIELPSLSTFPNFPTEVIYQNSRNLNEYFIRN 146


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = -1

Query: 456 SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 280
           SQL   +LD I KK     D +RF  VC  WR S +P  P +L  + PWL++P +  H +
Sbjct: 5   SQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 279 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLLHPFARK 100
                      FF LS  K + + LPE ++ R       GWL+ ++   +I LL+P  R 
Sbjct: 64  HRP--------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRS 115

Query: 99  VISLAPVTALPGVV 58
            + L P++  P VV
Sbjct: 116 KVHLPPLSTFPNVV 129


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = -1

Query: 456 SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 280
           SQL   +LD I KK     D +RF  VC  WR S +P  P +L  + PWL++P +  H +
Sbjct: 5   SQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 279 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLLHPFARK 100
                      FF LS  K + + LPE ++ R       GWL+ ++   +I LL+P  R 
Sbjct: 64  HRP--------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRS 115

Query: 99  VISLAPVTALPGVV 58
            + L P++  P VV
Sbjct: 116 KVHLPPLSTFPNVV 129