BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021014
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]    65   6e-09
ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putati...    55   6e-06

>emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]
          Length = 325

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/48 (75%), Positives = 37/48 (77%)
 Frame = +2

Query: 125 ERNRNVSDGVYIVRRAPNLGFM*FHQGQPSSLIHRSNALGSSHGGKSQ 268
           +RNR VSDGVYIVRRAP         GQ SSLIHRSNALGSSHGGKSQ
Sbjct: 46  KRNRYVSDGVYIVRRAPKRFL-----GQLSSLIHRSNALGSSHGGKSQ 88


>ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
           gi|223524771|gb|EEF27701.1| NADH-ubiquinone
           oxidoreductase chain, putative [Ricinus communis]
          Length = 366

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/48 (64%), Positives = 33/48 (68%)
 Frame = +2

Query: 119 PSERNRNVSDGVYIVRRAPNLGFM*FHQGQPSSLIHRSNALGSSHGGK 262
           P    R +SDGVYI+RRAP         GQ SSLIHRSNALGSSHGGK
Sbjct: 288 PRTTYRFLSDGVYILRRAPKRFL-----GQLSSLIHRSNALGSSHGGK 330