BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021004
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28252.3| unnamed protein product [Vitis vinifera]              101   5e-20
emb|CAN77042.1| hypothetical protein VITISV_036004 [Vitis vinifera]    99   3e-19
ref|XP_003595680.1| hypothetical protein MTR_2g059080 [Medicago ...    74   1e-11
ref|XP_002325196.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|NP_974833.1| SPOC dand transcription elongation factor S-II ...    69   4e-10

>emb|CBI28252.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  101 bits (252), Expect = 5e-20
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
 Frame = -1

Query: 473 PINRGASSQMKLNNHNGGDSDSQIMERKEGSHVENENHSLRKDILPKNADTPTQVLTGHG 294
           P +    + +     + GD   +IM++ EGS +EN  + L +    KN D+    +    
Sbjct: 76  PCSAAKGNDVGREGQDHGDGMIKIMKKTEGSDIENPKNLLTERTSAKNDDSLGNAVIRPC 135

Query: 293 HGDDLQLVSHNLDGNSKSLAEKV-NSITEKLWDGXXXXXXXXXXXXXXXXXSGEKAPDVK 117
             +D    S  LD  SK LA KV  ++ EKLWDG                 SGEK PDV 
Sbjct: 136 QRNDQCYGSIKLDEKSKPLAGKVAQTVAEKLWDGSLQLNSAVTVTTVAFFKSGEKIPDVN 195

Query: 116 WSKSIVVKGKVRLEAFEKFIQELPRSRSRGLMVISLCW 3
           WS+ + VKGKV+LEAFEK+I++LPRSR+RGLMV S C+
Sbjct: 196 WSEFVEVKGKVKLEAFEKYIKDLPRSRNRGLMV-SYCY 232


>emb|CAN77042.1| hypothetical protein VITISV_036004 [Vitis vinifera]
          Length = 524

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 60/152 (39%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
 Frame = -1

Query: 473 PINRGASSQMKLNNHNGGDSDSQIMERKEGSHVENENHSLRKDILPKNADTPTQVLTGHG 294
           P +    + +     + GD   +IM++ EGS +EN  + L +    KN D+    +    
Sbjct: 307 PCSAAKGNDVGREGQDHGDGMIKIMKKTEGSDIENPKNLLTERTSAKNDDSLGNAVIRPC 366

Query: 293 HGDDLQLVSHNLDGNSKSLAEKV-NSITEKLWDGXXXXXXXXXXXXXXXXXSGEKAPDVK 117
             +D    S  LD  SK LA KV  ++ EKLWDG                 SGEK PDV 
Sbjct: 367 QRNDQCYGSIKLDEKSKPLAGKVAQTVAEKLWDGSLQLNSAVTVTTVAFFKSGEKIPDVN 426

Query: 116 WSKSIVVKGKVRLEAFEKFIQELPRSRSRGLM 21
           WS+ + VKGKV+LEAFEK+I++LPRSR+RGLM
Sbjct: 427 WSEFVEVKGKVKLEAFEKYIKDLPRSRNRGLM 458


>ref|XP_003595680.1| hypothetical protein MTR_2g059080 [Medicago truncatula]
           gi|355484728|gb|AES65931.1| hypothetical protein
           MTR_2g059080 [Medicago truncatula]
          Length = 386

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/72 (51%), Positives = 46/72 (63%)
 Frame = -1

Query: 224 NSITEKLWDGXXXXXXXXXXXXXXXXXSGEKAPDVKWSKSIVVKGKVRLEAFEKFIQELP 45
           NS  +KLWDG                  GEK PDVKWS+SIVVKG V+L+ FEK+IQELP
Sbjct: 13  NSNNDKLWDGYLQLNSTPTVSAVGFFEGGEKMPDVKWSRSIVVKGTVKLQDFEKYIQELP 72

Query: 44  RSRSRGLMVISL 9
            S ++ LM++SL
Sbjct: 73  LSCNKELMIVSL 84


>ref|XP_002325196.1| predicted protein [Populus trichocarpa] gi|222866630|gb|EEF03761.1|
           predicted protein [Populus trichocarpa]
          Length = 72

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = -1

Query: 140 GEKAPDVKWSKSIVVKGKVRLEAFEKFIQELPRSRSRGLMV 18
           GEK PD+KWS+ + VKGKVRLEAFEK++Q+LPRSR+RGLMV
Sbjct: 7   GEKMPDLKWSEFLEVKGKVRLEAFEKYVQDLPRSRNRGLMV 47


>ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
            [Arabidopsis thaliana] gi|332006075|gb|AED93458.1| SPOC
            dand transcription elongation factor S-II domain protein
            [Arabidopsis thaliana]
          Length = 997

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
 Frame = -1

Query: 518  EQFVRSYNSEVRTGSPINRGASSQMKLNNHNGGDSD--SQIMERKEGSHVENENHSLRKD 345
            ++F+ S NSE   GSP           + H  G  D  S+  + K+GSH ++ + S ++ 
Sbjct: 556  DEFMESLNSEPPFGSP-----------HEHPPGKEDPASEKSDSKDGSHSKSPSRSPKQS 604

Query: 344  ILPKNADTPTQVLTGHGHGDDLQLVS------HNLDGN-----SKSLAEKVNSITEKLWD 198
              PK    P++ ++     +   ++S        LDG+     + SL + +    +++WD
Sbjct: 605  --PKE---PSESVSSKTELEKTNVISPKPDAGDQLDGDVSKPENTSLVDSIKE--DRIWD 657

Query: 197  GXXXXXXXXXXXXXXXXXSGEKAPDVKWSKSIVVKGKVRLEAFEKFIQELPRSRSRGLMV 18
            G                 SGEKA   +W   + VKG+VRL AF KF++ELP SRSR LMV
Sbjct: 658  GILQLSSASVVSVTGIFKSGEKAKTSEWPTMVEVKGRVRLSAFGKFVKELPLSRSRVLMV 717

Query: 17   ISL 9
            +++
Sbjct: 718  MNV 720