BLASTX nr result

ID: Coptis24_contig00020996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020996
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638683.1| hypothetical protein MTR_139s0035 [Medicago ...    55   8e-06

>ref|XP_003638683.1| hypothetical protein MTR_139s0035 [Medicago truncatula]
           gi|355504618|gb|AES85821.1| hypothetical protein
           MTR_139s0035 [Medicago truncatula]
          Length = 341

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/84 (32%), Positives = 43/84 (51%)
 Frame = -2

Query: 277 TIQHLFMDCEITQIIWDYFMHSLKCRGDASQGLMGQFNCKPDGRISTSGRILAKVIAHAV 98
           T  HLF+ C+++ +IW   ++ L         L   F C  +  +S   R    +I HA 
Sbjct: 149 TSTHLFLHCDVSSLIWRGILNWLGMNFITPHNLFAHFECWNNEVVSRRLRKGFLLIWHAT 208

Query: 97  TWSIWLERNHRTFDDESRDVQQLI 26
            W IW+ERN R F+ + +DV +L+
Sbjct: 209 IWLIWMERNARIFNHKEKDVGELV 232


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