BLASTX nr result

ID: Coptis24_contig00020995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020995
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454471.1| hypothetical protein SORBIDRAFT_04g031700 [S...    76   3e-12
gb|EEC77850.1| hypothetical protein OsI_17104 [Oryza sativa Indi...    76   3e-12
gb|AFW72819.1| hypothetical protein ZEAMMB73_541827, partial [Ze...    74   9e-12
gb|ACG44915.1| hypothetical protein [Zea mays] gi|195659223|gb|A...    73   3e-11
ref|XP_002300523.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11

>ref|XP_002454471.1| hypothetical protein SORBIDRAFT_04g031700 [Sorghum bicolor]
           gi|241934302|gb|EES07447.1| hypothetical protein
           SORBIDRAFT_04g031700 [Sorghum bicolor]
          Length = 62

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/54 (66%), Positives = 44/54 (81%)
 Frame = -3

Query: 370 MILVSTLAELLEEYTVLLARVLEQLFHDAPFPRRMRVLILRNIPFSSTSTSTPH 209
           MILV+ +AELLEEYT L+ARVLEQL H APFPRRMR L+LR++PF++     PH
Sbjct: 1   MILVAIVAELLEEYTALVARVLEQLLHGAPFPRRMRFLMLRSLPFAAPPPPPPH 54


>gb|EEC77850.1| hypothetical protein OsI_17104 [Oryza sativa Indica Group]
           gi|222629424|gb|EEE61556.1| hypothetical protein
           OsJ_15902 [Oryza sativa Japonica Group]
          Length = 65

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
 Frame = -3

Query: 370 MILVSTLAELLEEYTVLLARVLEQLFHDAPFPRRMRVLILRNIPFSSTSTSTP---HRRA 200
           MILV+ +AELLEEYTVL+ARVLEQLF+DAPFPRRMR L+LR++PF       P   H   
Sbjct: 1   MILVAVVAELLEEYTVLVARVLEQLFNDAPFPRRMRFLMLRSLPFVPPPLPPPPPSHALR 60

Query: 199 ITRTG 185
           +T  G
Sbjct: 61  VTTRG 65


>gb|AFW72819.1| hypothetical protein ZEAMMB73_541827, partial [Zea mays]
          Length = 126

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/62 (58%), Positives = 48/62 (77%)
 Frame = -3

Query: 397 ETRQLKKRKMILVSTLAELLEEYTVLLARVLEQLFHDAPFPRRMRVLILRNIPFSSTSTS 218
           ++R+    +MILV+ +AELLEEYT L+ARVLEQL H APFPRRMR L+LR++PF++    
Sbjct: 50  DSRRGTAHQMILVAIVAELLEEYTALVARVLEQLLHGAPFPRRMRFLMLRSLPFATPPLP 109

Query: 217 TP 212
            P
Sbjct: 110 PP 111


>gb|ACG44915.1| hypothetical protein [Zea mays] gi|195659223|gb|ACG49079.1|
           hypothetical protein [Zea mays]
          Length = 68

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/53 (66%), Positives = 43/53 (81%)
 Frame = -3

Query: 370 MILVSTLAELLEEYTVLLARVLEQLFHDAPFPRRMRVLILRNIPFSSTSTSTP 212
           MILV+ +AELLEEYT L+ARVLEQL H APFPRRMR L+LR++PF++     P
Sbjct: 1   MILVAIVAELLEEYTALVARVLEQLLHGAPFPRRMRFLMLRSLPFATPPLPPP 53


>ref|XP_002300523.1| predicted protein [Populus trichocarpa] gi|222847781|gb|EEE85328.1|
           predicted protein [Populus trichocarpa]
          Length = 54

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/53 (64%), Positives = 43/53 (81%)
 Frame = -3

Query: 370 MILVSTLAELLEEYTVLLARVLEQLFHDAPFPRRMRVLILRNIPFSSTSTSTP 212
           MILV+ +AEL+EEY   L RVLE +F+DAPFPRR+R LILRN+PF+S+S   P
Sbjct: 1   MILVAIVAELMEEYMAFLTRVLEHVFNDAPFPRRVRFLILRNLPFASSSHRPP 53


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