BLASTX nr result

ID: Coptis24_contig00020993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020993
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34563.3| unnamed protein product [Vitis vinifera]               62   6e-08
emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]    62   6e-08
ref|XP_002303679.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>emb|CBI34563.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
 Frame = -2

Query: 284 NRQFSSGI-KTIALITLAPHGIMQFGSTEKIRESLDFVNHIRYMFQQLISAEG-QLSRHA 111
           +RQFSSGI KTIA+I + P G++QFGS +KI E L+F++  + +F+++ + +G  +  +A
Sbjct: 110 HRQFSSGIIKTIAVIPVEPRGVVQFGSNQKIVERLEFLDLTKRLFREMENIDGLMVLSNA 169

Query: 110 SMPLNHEVYGPSTCANYDISNILKDGSGIEVGSLQS 3
              LN E+Y PS       S+++  GS   +G+++S
Sbjct: 170 PSALNSEIYDPSGF----FSSLISSGSS-NLGNIKS 200


>emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]
          Length = 893

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
 Frame = -2

Query: 284 NRQFSSGI-KTIALITLAPHGIMQFGSTEKIRESLDFVNHIRYMFQQLISAEG-QLSRHA 111
           +RQFSSGI KTIA+I + P G++QFGS +KI E L+F++  + +F+++ + +G  +  +A
Sbjct: 110 HRQFSSGIIKTIAVIPVEPRGVVQFGSNQKIVERLEFLDLTKRLFREMENIDGLMVLSNA 169

Query: 110 SMPLNHEVYGPSTCANYDISNILKDGSGIEVGSLQS 3
              LN E+Y PS       S+++  GS   +G+++S
Sbjct: 170 PSALNSEIYDPSGF----FSSLISSGSS-NLGNIKS 200


>ref|XP_002303679.1| predicted protein [Populus trichocarpa] gi|222841111|gb|EEE78658.1|
           predicted protein [Populus trichocarpa]
          Length = 831

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = -2

Query: 284 NRQFSSGIKTIALITLAPHGIMQFGSTEKIRESLDFVNHIRYMFQQLISAEGQLSRHASM 105
           +RQFSSGIKTIA+I++   G++QFGST+KI ES +F+   + +F ++ +  G  S     
Sbjct: 104 HRQFSSGIKTIAVISVESQGLVQFGSTQKILESEEFLGQTKRLFGKMENINGLTS----- 158

Query: 104 PLNHEVYGPSTCANYDIS 51
             N +      C +YD++
Sbjct: 159 --NSDSPSSLNCESYDLN 174


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