BLASTX nr result

ID: Coptis24_contig00020987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020987
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29933.3| unnamed protein product [Vitis vinifera]               86   6e-15
ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262...    86   6e-15
emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]    86   6e-15
ref|XP_002525438.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>emb|CBI29933.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 61/175 (34%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
 Frame = -3

Query: 569  QRRSSQINIDNVKIFTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 390
            QR  SQIN+DNV I+TTPRKL+HSLQD     S++ E+Q RR+ SP  SK EWSP+    
Sbjct: 554  QRLRSQINVDNVNIYTTPRKLVHSLQD-----SNFSEKQNRRLRSPSPSKYEWSPSVNYG 608

Query: 389  GDGHSHNSE----DNGNRSYSELGXXXXXXXXXXXXXXXXXXXXQPDASLEI---GSNEK 231
              G SH+      +NGN S    G                        S E+    + + 
Sbjct: 609  QSGFSHDMNYEVGENGNLSSGGGGDQSQGDSESVSSTEDVPTEANVQVSHEVIPGDTIDT 668

Query: 230  SGIQSSNTPPMVSWKNV-----LKWVFGLLFILLAFVFSFMWSNNAEEGSYLPPT 81
             G+       MV  K        K V+GL+F+L A + S +W +  + G  L PT
Sbjct: 669  QGVGMVGMVGMVGMKKAGEKISFKLVYGLIFLLFATLVSLLWVDTQDGGYNLVPT 723


>ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262437 [Vitis vinifera]
          Length = 615

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 61/175 (34%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
 Frame = -3

Query: 569 QRRSSQINIDNVKIFTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 390
           QR  SQIN+DNV I+TTPRKL+HSLQD     S++ E+Q RR+ SP  SK EWSP+    
Sbjct: 446 QRLRSQINVDNVNIYTTPRKLVHSLQD-----SNFSEKQNRRLRSPSPSKYEWSPSVNYG 500

Query: 389 GDGHSHNSE----DNGNRSYSELGXXXXXXXXXXXXXXXXXXXXQPDASLEI---GSNEK 231
             G SH+      +NGN S    G                        S E+    + + 
Sbjct: 501 QSGFSHDMNYEVGENGNLSSGGGGDQSQGDSESVSSTEDVPTEANVQVSHEVIPGDTIDT 560

Query: 230 SGIQSSNTPPMVSWKNV-----LKWVFGLLFILLAFVFSFMWSNNAEEGSYLPPT 81
            G+       MV  K        K V+GL+F+L A + S +W +  + G  L PT
Sbjct: 561 QGVGMVGMVGMVGMKKAGEKISFKLVYGLIFLLFATLVSLLWVDTQDGGYNLVPT 615


>emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]
          Length = 615

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 61/175 (34%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
 Frame = -3

Query: 569 QRRSSQINIDNVKIFTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 390
           QR  SQIN+DNV I+TTPRKL+HSLQD     S++ E+Q RR+ SP  SK EWSP+    
Sbjct: 446 QRLRSQINVDNVNIYTTPRKLVHSLQD-----SNFSEKQNRRLRSPSPSKYEWSPSVNYG 500

Query: 389 GDGHSHNSE----DNGNRSYSELGXXXXXXXXXXXXXXXXXXXXQPDASLEI---GSNEK 231
             G SH+      +NGN S    G                        S E+    + + 
Sbjct: 501 QSGFSHDMNYEVGENGNLSSGGGGDQSQGDSESVSSTEDVPTEANVQVSHEVIPGDTIDT 560

Query: 230 SGIQSSNTPPMVSWKNV-----LKWVFGLLFILLAFVFSFMWSNNAEEGSYLPPT 81
            G+       MV  K        K V+GL+F+L A + S +W +  + G  L PT
Sbjct: 561 QGVGMVGMVGMVGMKKAGENISFKLVYGLIFLLFATLVSLLWVDTQDGGYNLVPT 615


>ref|XP_002525438.1| conserved hypothetical protein [Ricinus communis]
           gi|223535251|gb|EEF36928.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
 Frame = -3

Query: 569 QRRSSQINIDNVKIFTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 390
           QR  S +N+D++ IFTTPRKL+HSLQ+ +D +SD+ E Q+RR  SP S K ++SP    +
Sbjct: 441 QRSRSHLNVDDINIFTTPRKLIHSLQEPNDVDSDFSERQSRRFRSP-SRKYDYSPNMKFN 499

Query: 389 GDGHSHNS--EDNGNRSYSELGXXXXXXXXXXXXXXXXXXXXQPDASLEIGSNEKSGIQS 216
            +G  H+   E   NR+    G                        S E+ S  K     
Sbjct: 500 RNGFQHHEGYEVEENRNSYAGGEQLQGTSESVSSTDDVPVHTDVQLSPEVLSGNK----- 554

Query: 215 SNTPPMVS----WKNVLKWVFGLLFILLAFVFSFMWSNNAEEGSYLPPT 81
            + P   S     KN  +   GL F LLA   S +W ++ + G YL PT
Sbjct: 555 DDAPRFCSRKDHRKNFYRLFGGLFFALLAIFSSLLWIDSQDNGGYLVPT 603


>ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|222862288|gb|EEE99794.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 53/165 (32%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
 Frame = -3

Query: 569 QRRSSQINIDNVKIFTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 390
           QR  S IN++NV IFTTPRKL+H+LQD +D +SD+ E+Q  R  SPCS K ++ PT  L 
Sbjct: 445 QRSRSHINVNNVSIFTTPRKLVHALQDPNDLDSDFSEKQNERFGSPCSCKFDYRPTLRLK 504

Query: 389 GDGHSHN--SEDNGNRSYSELGXXXXXXXXXXXXXXXXXXXXQPDASLEIGSNEKSGIQS 216
            +G   +  SE N N +    G                        S E+   +K+    
Sbjct: 505 QNGFQQDMGSEVNENGNSYAGGEQLQGPSESVASTEEIPVNTDTQVSTEVILGKKTDDPK 564

Query: 215 SNTPPMVSWKNVLKWVFGLLFILLAFVFSFMWSNNAEEGSYLPPT 81
            N       K     V G    LLA + S M+    ++  ++ PT
Sbjct: 565 KNCAEREMRKTSSLLVVGFCIALLAILASLMFIYLQDDSHHMVPT 609


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