BLASTX nr result

ID: Coptis24_contig00020973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020973
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67123.1| hypothetical protein VITISV_040164 [Vitis vinifera]    73   3e-11
emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]    72   4e-11
emb|CAN82064.1| hypothetical protein VITISV_022772 [Vitis vinifera]    72   4e-11
emb|CAN80547.1| hypothetical protein VITISV_010898 [Vitis vinifera]    72   4e-11
emb|CAN62074.1| hypothetical protein VITISV_001619 [Vitis vinifera]    72   4e-11

>emb|CAN67123.1| hypothetical protein VITISV_040164 [Vitis vinifera]
          Length = 982

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/76 (50%), Positives = 47/76 (61%)
 Frame = -2

Query: 419 MNVVRCLLRGMHVPKRFWSMAVLTTTFLINRTPSRILNGQVPLHLVRPGLPLFSIEPRVF 240
           +   R LL   +VP RFW  AVLTT +LINR PS +L+ Q+P  L+ P  PL+ + PRVF
Sbjct: 440 VETTRTLLLHSNVPFRFWEDAVLTTCYLINRMPSFVLHDQIPHSLLFPDQPLYFLPPRVF 499

Query: 239 SCICFVQXXXXTSKQD 192
            C CFV     T KQD
Sbjct: 500 GCTCFVH--ILTPKQD 513


>emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]
          Length = 2172

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -2

Query: 419  MNVVRCLLRGMHVPKRFWSMAVLTTTFLINRTPSRILNGQVPLHLVRPGLPLFSIEPRVF 240
            +   R LL   HVP RFW  AVLT  +LINR PS +L+ Q+P  L+ P  PL+ + PRVF
Sbjct: 1287 VETARTLLLHSHVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVF 1346

Query: 239  SCICFV 222
             C CFV
Sbjct: 1347 GCTCFV 1352


>emb|CAN82064.1| hypothetical protein VITISV_022772 [Vitis vinifera]
          Length = 1224

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -2

Query: 419 MNVVRCLLRGMHVPKRFWSMAVLTTTFLINRTPSRILNGQVPLHLVRPGLPLFSIEPRVF 240
           +   R LL   HVP RFW  AVLT  +LINR PS +L+ Q+P  L+ P  PL+ + PRVF
Sbjct: 607 VETARTLLLHSHVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVF 666

Query: 239 SCICFV 222
            C CFV
Sbjct: 667 GCTCFV 672


>emb|CAN80547.1| hypothetical protein VITISV_010898 [Vitis vinifera]
          Length = 1181

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -2

Query: 419 MNVVRCLLRGMHVPKRFWSMAVLTTTFLINRTPSRILNGQVPLHLVRPGLPLFSIEPRVF 240
           +   R LL   HVP RFW  AVLT  +LINR PS +L+ Q+P  L+ P  PL+ + PRVF
Sbjct: 464 VETARTLLLHSHVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVF 523

Query: 239 SCICFV 222
            C CFV
Sbjct: 524 GCTCFV 529


>emb|CAN62074.1| hypothetical protein VITISV_001619 [Vitis vinifera]
          Length = 1237

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/66 (51%), Positives = 42/66 (63%)
 Frame = -2

Query: 419 MNVVRCLLRGMHVPKRFWSMAVLTTTFLINRTPSRILNGQVPLHLVRPGLPLFSIEPRVF 240
           +   R LL   HVP RFW  AVLT  +LINR PS +L+ Q+P  L+ P  PL+ + PRVF
Sbjct: 555 VETARTLLLHSHVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVF 614

Query: 239 SCICFV 222
            C CFV
Sbjct: 615 GCTCFV 620


Top